moab::EntitySequence Class Reference

#include <EntitySequence.hpp>

Inheritance diagram for moab::EntitySequence:

Collaboration diagram for moab::EntitySequence:

Public Member Functions
	EntitySequence (EntityHandle start, EntityID count, SequenceData *dat)
virtual	~EntitySequence ()
EntityType	type () const
EntityHandle	start_handle () const
EntityHandle	end_handle () const
SequenceData *	data () const
void	data (SequenceData *ptr)
EntityID	size () const
bool	using_entire_data () const
	True if SequenceData has no holes and is used only by this EntitySequence. More...
virtual int	values_per_entity () const
	Integer value used in finding appropriate SequenceData. More...
virtual EntitySequence *	split (EntityHandle here)=0
	Split this sequence into two consecutive sequences. More...
virtual ErrorCode	merge (EntitySequence &other)
	Merge this sequence with another. More...
virtual ErrorCode	pop_back (EntityID count)
	Erase entities in range: (end_handle()-count, end_handle()]. More...
virtual ErrorCode	pop_front (EntityID count)
	Erase entities in range: [start_handle(), start_handle()+count) More...
virtual SequenceData *	create_data_subset (EntityHandle start_handle, EntityHandle end_handle) const =0
	Create a new SequenceData that is a copy of a subset of the one referenced by this sequence. More...
virtual void	get_const_memory_use (unsigned long &bytes_per_entity, unsigned long &size_of_sequence) const =0
	Get memory characteristcs that are the same for all entities. More...
virtual unsigned long	get_per_entity_memory_use (EntityHandle first, EntityHandle last) const
	Get portion of memory use that varies per entity. More...

Protected Member Functions
	EntitySequence (EntityHandle h)
	EntitySequence (EntitySequence &split_from, EntityHandle here)
SequenceData *	create_data_subset (EntityHandle start_handle, EntityHandle end_handle, int num_sequence_arrays, unsigned const *bytes_per_element) const
ErrorCode	prepend_entities (EntityID count)
ErrorCode	append_entities (EntityID count)

Private Attributes
EntityHandle	startHandle
EntityHandle	endHandle
SequenceData *	sequenceData

Detailed Description

Definition at line 12 of file EntitySequence.hpp.

Constructor & Destructor Documentation

EntitySequence() [1/3]

moab::EntitySequence::EntitySequence ( EntityHandle  h )

inlineprotected

Definition at line 19 of file EntitySequence.hpp.

: startHandle( h ), endHandle( h ), sequenceData( NULL ) {}

EntitySequence() [2/3]

moab::EntitySequence::EntitySequence ( EntitySequence &  split_from, EntityHandle  here  )

inlineprotected

Definition at line 21 of file EntitySequence.hpp.

 : startHandle( here ), endHandle( split_from.endHandle ), sequenceData( split_from.sequenceData )
 {
 split_from.endHandle = here - 1;
 }

References endHandle.

EntitySequence() [3/3]

moab::EntitySequence::EntitySequence ( EntityHandle  start, EntityID  count, SequenceData *  dat  )

inline

Definition at line 36 of file EntitySequence.hpp.

 : startHandle( start ), endHandle( start + count - 1 ), sequenceData( dat )
 {
 }

~EntitySequence()

virtual moab::EntitySequence::~EntitySequence ( )

inlinevirtual

Definition at line 41 of file EntitySequence.hpp.

{}

Member Function Documentation

append_entities()

ErrorCode moab::EntitySequence::append_entities ( EntityID  count )

protected

Definition at line 44 of file EntitySequence.cpp.

{
 EntityHandle new_end = endHandle + count;
 if( new_end > data()->end_handle() ) return MB_FAILURE;
 
 endHandle = new_end;
 return MB_SUCCESS;
}

References data(), end_handle(), endHandle, and MB_SUCCESS.

Referenced by moab::UnstructuredElemSeq::push_back(), moab::VertexSequence::push_back(), and moab::MeshSetSequence::push_back().

create_data_subset() [1/2]

virtual SequenceData* moab::EntitySequence::create_data_subset ( EntityHandle  start_handle, EntityHandle  end_handle  ) const

pure virtual

Create a new SequenceData that is a copy of a subset of the one referenced by this sequence.

Create a new SequenceData that is a copy of a subset of the SequenceData referenced by this EntitySequence. Do not make any changes to this EntitySequence or the current SequenceData.

Implemented in moab::TypeSequenceManager::DummySequence, moab::MeshSetSequence, moab::SweptElementSeq, moab::StructuredElementSeq, moab::VertexSequence, and moab::UnstructuredElemSeq.

create_data_subset() [2/2]

SequenceData* moab::EntitySequence::create_data_subset ( EntityHandle  start_handle, EntityHandle  end_handle, int  num_sequence_arrays, unsigned const *  bytes_per_element  ) const

protected

data() [1/2]

SequenceData* moab::EntitySequence::data ( ) const

inline

Definition at line 58 of file EntitySequence.hpp.

 {
 return sequenceData;
 }

References sequenceData.

Referenced by moab::SequenceManager::add_vsequence(), moab::Core::adjacencies_iterate(), moab::SequenceManager::allocate_mesh_set(), append_entities(), moab::MeshSetSequence::array(), moab::VertexSequence::array(), moab::TypeSequenceManager::check_valid_data(), moab::HigherOrderFactory::convert_sequence(), moab::Core::coords_iterate(), moab::UnstructuredElemSeq::create_data_subset(), moab::VertexSequence::create_data_subset(), moab::SequenceManager::create_element(), moab::SequenceManager::create_entity_sequence(), moab::SequenceManager::create_mesh_set(), moab::SequenceManager::create_meshset_sequence(), moab::SequenceManager::create_scd_sequence(), moab::SequenceManager::create_sweep_sequence(), moab::SequenceManager::create_vertex(), moab::TypeSequenceManager::erase(), moab::AEntityFactory::get_adjacency_ptr(), moab::UnstructuredElemSeq::get_array(), moab::VarLenDenseTag::get_array(), moab::DenseTag::get_array_private(), moab::VertexSequence::get_coordinate_arrays(), moab::VertexSequence::get_coordinates(), moab::VertexSequence::get_coordinates_ref(), moab::AEntityFactory::get_memory_use(), moab::MeshSetSequence::get_set(), moab::get_tagged(), moab::MeshSetSequence::initialize(), moab::TypeSequenceManager::insert_sequence(), moab::operator<<(), moab::MeshSetSequence::pop_back(), moab::MeshSetSequence::pop_front(), prepend_entities(), moab::Core::print_database(), moab::MeshSetSequence::push_back(), moab::MeshSetSequence::push_front(), moab::TypeSequenceManager::remove_sequence(), moab::TypeSequenceManager::replace_subsequence(), moab::ScdBox::ScdBox(), moab::StructuredElementSeq::sdata(), moab::SweptElementSeq::sdata(), moab::AEntityFactory::set_adjacency_ptr(), moab::VertexSequence::set_coordinates(), moab::UnstructuredElemSeq::UnstructuredElemSeq(), using_entire_data(), moab::VertexSequence::VertexSequence(), moab::MeshSetSequence::~MeshSetSequence(), and moab::TypeSequenceManager::~TypeSequenceManager().

data() [2/2]

void moab::EntitySequence::data ( SequenceData *  ptr )

inline

Definition at line 63 of file EntitySequence.hpp.

 {
 sequenceData = ptr;
 }

References sequenceData.

end_handle()

EntityHandle moab::EntitySequence::end_handle ( ) const

inline

Definition at line 53 of file EntitySequence.hpp.

 {
 return endHandle;
 }

References endHandle.

Referenced by moab::SequenceManager::allocate_mesh_set(), append_entities(), moab::TypeSequenceManager::check_valid_data(), moab::Core::connect_iterate(), moab::HigherOrderFactory::convert(), moab::Core::coords_iterate(), moab::HigherOrderFactory::copy_nodes(), moab::SequenceManager::create_element(), moab::ReadUtil::create_entity_sets(), moab::SequenceManager::create_mesh_set(), moab::SequenceManager::create_vertex(), moab::TypeSequenceManager::erase(), moab::WriteUtil::gather_nodes_from_elements(), moab::Core::get_coords(), moab::ReadUtil::get_element_connect(), moab::ReorderTool::get_entities(), moab::ReadUtil::get_node_coords(), moab::MeshSetSequence::get_per_entity_memory_use(), moab::TypeSequenceManager::insert_sequence(), merge(), moab::operator<<(), moab::ParallelComm::pack_entities(), moab::MeshSetSequence::pop_back(), moab::Core::print_database(), moab::MeshSetSequence::push_back(), moab::HigherOrderFactory::remove_ho_nodes(), moab::TypeSequenceManager::replace_subsequence(), moab::UnstructuredElemSeq::split(), moab::HigherOrderFactory::tag_for_deletion(), moab::RangeSeqIntersectIter::update_entity_sequence(), and using_entire_data().

get_const_memory_use()

virtual void moab::EntitySequence::get_const_memory_use ( unsigned long &  bytes_per_entity, unsigned long &  size_of_sequence  ) const

pure virtual

Get memory characteristcs that are the same for all entities.

Get charactersitic constant memory use for all entities in sequence.

Parameters

bytes_per_entity	The total bytes consumed for each entity in the underlying SequenceData. It is assumed that the same amount of memory is consumed for unused portions of the SequenceData.
size_of_sequence	The size of the leaf subclass of this class

Implemented in moab::VertexSequence, moab::UnstructuredElemSeq, moab::SweptElementSeq, moab::StructuredElementSeq, moab::MeshSetSequence, and moab::TypeSequenceManager::DummySequence.

get_per_entity_memory_use()

unsigned long moab::EntitySequence::get_per_entity_memory_use ( EntityHandle  first, EntityHandle  last  ) const

virtual

Get portion of memory use that varies per entity.

Returns

Any per-entity memory use not accounted for in the results of get_const_memory_use.

Reimplemented in moab::TypeSequenceManager::DummySequence, and moab::MeshSetSequence.

Definition at line 71 of file EntitySequence.cpp.

{
 return 0;
}

merge()

ErrorCode moab::EntitySequence::merge ( EntitySequence &  other )

virtual

Merge this sequence with another.

Combine two adjacent sequences. Sequence handle blocks must be consective and sequences must share a common SequenceData.

Definition at line 53 of file EntitySequence.cpp.

{
 if( sequenceData != other.sequenceData ) return MB_FAILURE;
 if( end_handle() + 1 == other.start_handle() )
 {
 endHandle = other.end_handle();
 other.startHandle = other.end_handle() + 1;
 }
 else if( start_handle() == other.end_handle() + 1 )
 {
 startHandle = other.start_handle();
 other.endHandle = other.start_handle() - 1;
 }
 else
 return MB_FAILURE;
 return MB_SUCCESS;
}

References end_handle(), endHandle, MB_SUCCESS, sequenceData, start_handle(), and startHandle.

pop_back()

ErrorCode moab::EntitySequence::pop_back ( EntityID  count )

virtual

Erase entities in range: (end_handle()-count, end_handle()].

Reimplemented in moab::MeshSetSequence.

Definition at line 17 of file EntitySequence.cpp.

{
 EntityHandle new_end = endHandle - count;
 if( new_end < startHandle ) return MB_FAILURE;
 
 endHandle = new_end;
 return MB_SUCCESS;
}

References endHandle, MB_SUCCESS, and startHandle.

Referenced by moab::TypeSequenceManager::erase(), and moab::MeshSetSequence::pop_back().

pop_front()

ErrorCode moab::EntitySequence::pop_front ( EntityID  count )

virtual

Erase entities in range: [start_handle(), start_handle()+count)

Reimplemented in moab::MeshSetSequence.

Definition at line 26 of file EntitySequence.cpp.

{
 EntityHandle new_start = startHandle + count;
 if( new_start > endHandle ) return MB_FAILURE;
 
 startHandle = new_start;
 return MB_SUCCESS;
}

References endHandle, MB_SUCCESS, and startHandle.

Referenced by moab::TypeSequenceManager::erase(), and moab::MeshSetSequence::pop_front().

prepend_entities()

ErrorCode moab::EntitySequence::prepend_entities ( EntityID  count )

protected

Definition at line 35 of file EntitySequence.cpp.

{
 EntityHandle new_start = startHandle - count;
 if( new_start < data()->start_handle() ) return MB_FAILURE;
 
 startHandle = new_start;
 return MB_SUCCESS;
}

References data(), MB_SUCCESS, start_handle(), and startHandle.

Referenced by moab::UnstructuredElemSeq::push_front(), moab::VertexSequence::push_front(), and moab::MeshSetSequence::push_front().

size()

EntityID moab::EntitySequence::size ( ) const

inline

Definition at line 68 of file EntitySequence.hpp.

 {
 return endHandle - startHandle + 1;
 }

References endHandle, and startHandle.

Referenced by moab::HigherOrderFactory::add_mid_edge_nodes(), moab::HigherOrderFactory::add_mid_face_nodes(), moab::HigherOrderFactory::add_mid_volume_nodes(), moab::HigherOrderFactory::copy_nodes(), moab::MeshSetSequence::initialize(), moab::TypeSequenceManager::replace_subsequence(), moab::HigherOrderFactory::zero_nodes(), and moab::MeshSetSequence::~MeshSetSequence().

split()

virtual EntitySequence* moab::EntitySequence::split ( EntityHandle  here )

pure virtual

Split this sequence into two consecutive sequences.

Split this sequence into two sequences.

Parameters

here	New sequences should be [start_handle(),here) & [here,end_handle()]

Returns

New sequence containing [here,end_handle()]

Implemented in moab::TypeSequenceManager::DummySequence, moab::VertexSequence, moab::UnstructuredElemSeq, moab::SweptElementSeq, moab::StructuredElementSeq, moab::PolyElementSeq, and moab::MeshSetSequence.

Referenced by moab::TypeSequenceManager::split_sequence().

start_handle()

EntityHandle moab::EntitySequence::start_handle ( ) const

inline

Definition at line 48 of file EntitySequence.hpp.

 {
 return startHandle;
 }

References startHandle.

Referenced by moab::HigherOrderFactory::add_mid_edge_nodes(), moab::HigherOrderFactory::add_mid_face_nodes(), moab::HigherOrderFactory::add_mid_volume_nodes(), moab::SequenceManager::allocate_mesh_set(), moab::TypeSequenceManager::check_valid_data(), moab::Core::connect_iterate(), moab::HigherOrderFactory::copy_nodes(), moab::SequenceManager::create_element(), moab::ReadUtil::create_entity_sets(), moab::SequenceManager::create_mesh_set(), moab::SequenceManager::create_vertex(), moab::TypeSequenceManager::erase(), moab::TypeSequenceManager::find(), moab::WriteUtil::gather_nodes_from_elements(), moab::UnstructuredElemSeq::get_array(), moab::DenseTag::get_array_private(), moab::PolyElementSeq::get_connectivity(), moab::UnstructuredElemSeq::get_connectivity(), moab::VertexSequence::get_coordinate_arrays(), moab::Core::get_coords(), moab::ReadUtil::get_element_connect(), moab::ReorderTool::get_entities(), moab::TypeSequenceManager::get_memory_use(), moab::ReadUtil::get_node_coords(), moab::MeshSetSequence::get_per_entity_memory_use(), moab::MeshSetSequence::initialize(), moab::TypeSequenceManager::insert_sequence(), merge(), moab::operator<<(), moab::MeshSetSequence::pop_front(), prepend_entities(), moab::Core::print_database(), moab::MeshSetSequence::push_front(), moab::HigherOrderFactory::remove_ho_nodes(), moab::TypeSequenceManager::remove_sequence(), moab::SequenceManager::replace_subsequence(), moab::TypeSequenceManager::replace_subsequence(), moab::ScdBox::ScdBox(), moab::UnstructuredElemSeq::set_connectivity(), moab::UnstructuredElemSeq::split(), moab::HigherOrderFactory::tag_for_deletion(), type(), using_entire_data(), and moab::MeshSetSequence::~MeshSetSequence().

type()

EntityType moab::EntitySequence::type ( ) const

inline

Definition at line 43 of file EntitySequence.hpp.

 {
 return TYPE_FROM_HANDLE( start_handle() );
 }

References start_handle(), and moab::TYPE_FROM_HANDLE().

Referenced by moab::HigherOrderFactory::add_mid_edge_nodes(), moab::HigherOrderFactory::add_mid_face_nodes(), moab::HigherOrderFactory::add_mid_volume_nodes(), moab::HigherOrderFactory::convert(), moab::HigherOrderFactory::convert_sequence(), moab::HigherOrderFactory::copy_corner_nodes(), moab::HigherOrderFactory::copy_mid_edge_nodes(), moab::HigherOrderFactory::copy_mid_face_nodes(), moab::HigherOrderFactory::copy_mid_volume_nodes(), moab::HigherOrderFactory::copy_nodes(), moab::UnstructuredElemSeq::get_connectivity(), moab::AEntityFactory::get_memory_use(), moab::ElementSequence::has_mid_edge_nodes(), moab::ElementSequence::has_mid_face_nodes(), moab::ElementSequence::has_mid_volume_nodes(), moab::ParallelComm::pack_entities(), moab::HigherOrderFactory::remove_mid_edge_nodes(), moab::HigherOrderFactory::remove_mid_face_nodes(), moab::HigherOrderFactory::remove_mid_volume_nodes(), moab::HigherOrderFactory::tag_for_deletion(), moab::HigherOrderFactory::zero_mid_edge_nodes(), moab::HigherOrderFactory::zero_mid_face_nodes(), and moab::HigherOrderFactory::zero_mid_volume_nodes().

using_entire_data()

bool moab::EntitySequence::using_entire_data

(

)

const

True if SequenceData has no holes and is used only by this EntitySequence.

Definition at line 7 of file EntitySequence.cpp.

{
 return start_handle() == data()->start_handle() && end_handle() == data()->end_handle();
}

References data(), end_handle(), moab::SequenceData::end_handle(), start_handle(), and moab::SequenceData::start_handle().

Referenced by moab::TypeSequenceManager::erase(), moab::TypeSequenceManager::insert_sequence(), moab::TypeSequenceManager::remove_sequence(), moab::TypeSequenceManager::replace_subsequence(), and moab::TypeSequenceManager::~TypeSequenceManager().

values_per_entity()

int moab::EntitySequence::values_per_entity ( ) const

virtual

Integer value used in finding appropriate SequenceData.

This value is matched to input values by TypeSequenceManager to determine if an available, unused portino of a SequenceData can be used for a specific entity allocation. For example, it is used to find a SequenceData with the appropriate number of vertices per element when allocating elements. The default value is zero.

Reimplemented in moab::UnstructuredElemSeq, moab::SweptElementSeq, and moab::StructuredElementSeq.

Definition at line 12 of file EntitySequence.cpp.

{
 return 0;
}

Referenced by moab::ReorderTool::get_entities(), moab::ReorderTool::handle_order_from_int_tag(), moab::ReorderTool::reorder_entities(), and moab::WriteDamsel::write_entities().

Member Data Documentation

endHandle

EntityHandle moab::EntitySequence::endHandle

private

Definition at line 15 of file EntitySequence.hpp.

Referenced by append_entities(), end_handle(), EntitySequence(), merge(), pop_back(), pop_front(), and size().

sequenceData

SequenceData* moab::EntitySequence::sequenceData

private

Definition at line 16 of file EntitySequence.hpp.

Referenced by data(), and merge().

startHandle

EntityHandle moab::EntitySequence::startHandle

private

Definition at line 15 of file EntitySequence.hpp.

Referenced by merge(), pop_back(), pop_front(), prepend_entities(), size(), and start_handle().

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The documentation for this class was generated from the following files:

• EntitySequence.hpp
• EntitySequence.cpp