moab::LinearTet Class Reference

#include <LinearTet.hpp>

Static Public Member Functions
static ErrorCode	evalFcn (const double *params, const double *field, const int ndim, const int num_tuples, double *work, double *result)
	Forward-evaluation of field at parametric coordinates. More...
static ErrorCode	reverseEvalFcn (EvalFcn eval, JacobianFcn jacob, InsideFcn ins, const double *posn, const double *verts, const int nverts, const int ndim, const double iter_tol, const double inside_tol, double *work, double *params, int *is_inside)
	Reverse-evaluation of parametric coordinates at physical space position. More...
static ErrorCode	normalFcn (const int ientDim, const int facet, const int nverts, const double *verts, double normal[3])
	Evaluate the normal at a specified facet. More...
static ErrorCode	jacobianFcn (const double *params, const double *verts, const int nverts, const int ndim, double *work, double *result)
	Evaluate the jacobian at a specified parametric position. More...
static ErrorCode	integrateFcn (const double *field, const double *verts, const int nverts, const int ndim, const int num_tuples, double *work, double *result)
	Forward-evaluation of field at parametric coordinates. More...
static ErrorCode	initFcn (const double *verts, const int nverts, double *&work)
	Initialize this EvalSet. More...
static int	insideFcn (const double *params, const int ndim, const double tol)
	Function that returns whether or not the parameters are inside the natural space of the element. More...
static ErrorCode	evaluate_reverse (EvalFcn eval, JacobianFcn jacob, InsideFcn inside_f, const double *posn, const double *verts, const int nverts, const int ndim, const double iter_tol, const double inside_tol, double *work, double *params, int *inside)
static EvalSet	eval_set ()
static bool	compatible (EntityType tp, int numv, EvalSet &eset)

Static Protected Attributes
static const double	corner [4][3] = { { 0, 0, 0 }, { 1, 0, 0 }, { 0, 1, 0 }, { 0, 0, 1 } }

Detailed Description

Definition at line 12 of file LinearTet.hpp.

Member Function Documentation

compatible()

static bool moab::LinearTet::compatible ( EntityType  tp, int  numv, EvalSet &  eset  )

inlinestatic

Definition at line 86 of file LinearTet.hpp.

    {
        if( tp == MBTET && numv >= 4 )
        {
            eset = eval_set();
            return true;
        }
        else
            return false;
    }

References eval_set(), and MBTET.

Referenced by moab::EvalSet::get_eval_set().

eval_set()

static EvalSet moab::LinearTet::eval_set ( )

inlinestatic

Definition at line 81 of file LinearTet.hpp.

    {
        return EvalSet( evalFcn, reverseEvalFcn, normalFcn, jacobianFcn, integrateFcn, initFcn, insideFcn );
    }

References evalFcn(), initFcn(), insideFcn(), integrateFcn(), jacobianFcn(), normalFcn(), and reverseEvalFcn().

Referenced by compatible().

evalFcn()

ErrorCode moab::LinearTet::evalFcn ( const double *  params, const double *  field, const int  ndim, const int  num_tuples, double *  work, double *  result  )

static

Forward-evaluation of field at parametric coordinates.

Definition at line 44 of file LinearTet.cpp.

{
    assert( params && field && num_tuples > 0 );
    std::vector< double > f0( num_tuples );
    std::copy( field, field + num_tuples, f0.begin() );
    std::copy( field, field + num_tuples, result );
 
    for( unsigned i = 1; i < 4; ++i )
    {
        double p = 0.5 * ( params[i - 1] + 1 );  // transform from -1 <= p <= 1 to 0 <= p <= 1
        for( int j = 0; j < num_tuples; j++ )
            result[j] += ( field[i * num_tuples + j] - f0[j] ) * p;
    }
 
    return MB_SUCCESS;
}

References MB_SUCCESS.

Referenced by eval_set().

evaluate_reverse()

ErrorCode moab::LinearTet::evaluate_reverse ( EvalFcn  eval, JacobianFcn  jacob, InsideFcn  inside_f, const double *  posn, const double *  verts, const int  nverts, const int  ndim, const double  iter_tol, const double  inside_tol, double *  work, double *  params, int *  inside  )

static

Definition at line 120 of file LinearTet.cpp.

{
    // TODO: should differentiate between epsilons used for
    // Newton Raphson iteration, and epsilons used for curved boundary geometry errors
    // right now, fix the tolerance used for NR
    const double error_tol_sqr = iter_tol * iter_tol;
    CartVect* cvparams         = reinterpret_cast< CartVect* >( params );
    const CartVect* cvposn     = reinterpret_cast< const CartVect* >( posn );
 
    // find best initial guess to improve convergence
    CartVect tmp_params[] = { CartVect( -1, -1, -1 ), CartVect( 1, -1, -1 ), CartVect( -1, 1, -1 ),
                              CartVect( -1, -1, 1 ) };
    double resl           = std::numeric_limits< double >::max();
    CartVect new_pos, tmp_pos;
    ErrorCode rval;
    for( unsigned int i = 0; i < 4; i++ )
    {
        rval = ( *eval )( tmp_params[i].array(), verts, ndim, ndim, work, tmp_pos.array() );
        if( MB_SUCCESS != rval ) return rval;
        double tmp_resl = ( tmp_pos - *cvposn ).length_squared();
        if( tmp_resl < resl )
        {
            *cvparams = tmp_params[i];
            new_pos   = tmp_pos;
            resl      = tmp_resl;
        }
    }
 
    // residual is diff between old and new pos; need to minimize that
    CartVect res = new_pos - *cvposn;
    Matrix3 J;
    rval = ( *jacob )( cvparams->array(), verts, nverts, ndim, work, J.array() );
#ifndef NDEBUG
    double det = J.determinant();
    assert( det > std::numeric_limits< double >::epsilon() );
#endif
    Matrix3 Ji = J.inverse();
 
    int iters = 0;
    // while |res| larger than tol
    int dum, *tmp_inside = ( inside ? inside : &dum );
    while( res % res > error_tol_sqr )
    {
        if( ++iters > 25 )
        {
            // if we haven't converged but we're outside, that's defined as success
            *tmp_inside = ( *inside_f )( params, ndim, inside_tol );
            if( !( *tmp_inside ) )
                return MB_SUCCESS;
            else
                return MB_INDEX_OUT_OF_RANGE;
        }
 
        // new params tries to eliminate residual
        *cvparams -= Ji * res;
 
        // get the new forward-evaluated position, and its difference from the target pt
        rval = ( *eval )( params, verts, ndim, ndim, work, new_pos.array() );
        if( MB_SUCCESS != rval ) return rval;
        res = new_pos - *cvposn;
    }
 
    if( inside ) *inside = ( *inside_f )( params, ndim, inside_tol );
 
    return MB_SUCCESS;
}  // Map::evaluate_reverse()

References moab::CartVect::array(), moab::Matrix3::array(), moab::Matrix3::determinant(), moab::dum, ErrorCode, moab::Matrix3::inverse(), length_squared(), MB_INDEX_OUT_OF_RANGE, and MB_SUCCESS.

Referenced by reverseEvalFcn().

initFcn()

ErrorCode moab::LinearTet::initFcn ( const double *  verts, const int  nverts, double *&  work  )

static

Initialize this EvalSet.

Definition at line 12 of file LinearTet.cpp.

{
    // allocate work array as:
    // work[0..8] = T
    // work[9..17] = Tinv
    // work[18] = detT
    // work[19] = detTinv
    if( nverts != 4 )
    {
        std::cout << "Invalid Tetrahedron. Expected 4 vertices.\n";
        return MB_FAILURE;
    }
 
    assert( verts );
 
    Matrix3 J( verts[1 * 3 + 0] - verts[0 * 3 + 0], verts[2 * 3 + 0] - verts[0 * 3 + 0],
               verts[3 * 3 + 0] - verts[0 * 3 + 0], verts[1 * 3 + 1] - verts[0 * 3 + 1],
               verts[2 * 3 + 1] - verts[0 * 3 + 1], verts[3 * 3 + 1] - verts[0 * 3 + 1],
               verts[1 * 3 + 2] - verts[0 * 3 + 2], verts[2 * 3 + 2] - verts[0 * 3 + 2],
               verts[3 * 3 + 2] - verts[0 * 3 + 2] );
 
    // Update the work array
    if( !work ) work = new double[20];
 
    J.copyto( work );
    J.inverse().copyto( work + Matrix3::size );
    work[18] = J.determinant();
    work[19] = ( work[18] < 1e-12 ? std::numeric_limits< double >::max() : 1.0 / work[18] );
 
    return MB_SUCCESS;
}

References moab::Matrix3::copyto(), moab::Matrix3::determinant(), moab::Matrix3::inverse(), MB_SUCCESS, and moab::Matrix3::size.

Referenced by eval_set().

insideFcn()

int moab::LinearTet::insideFcn ( const double *  params, const int  ndim, const double  tol  )

static

Function that returns whether or not the parameters are inside the natural space of the element.

Definition at line 114 of file LinearTet.cpp.

{
    return ( params[0] >= -1.0 - tol && params[1] >= -1.0 - tol && params[2] >= -1.0 - tol &&
             params[0] + params[1] + params[2] <= 1.0 + tol );
}

Referenced by eval_set().

integrateFcn()

ErrorCode moab::LinearTet::integrateFcn ( const double *  field, const double *  verts, const int  nverts, const int  ndim, const int  num_tuples, double *  work, double *  result  )

static

Forward-evaluation of field at parametric coordinates.

Definition at line 66 of file LinearTet.cpp.

{
    assert( field && num_tuples > 0 );
    std::fill( result, result + num_tuples, 0.0 );
    for( int i = 0; i < nverts; ++i )
    {
        for( int j = 0; j < num_tuples; j++ )
            result[j] += field[i * num_tuples + j];
    }
    double tmp = work[18] / 24.0;
    for( int i = 0; i < num_tuples; i++ )
        result[i] *= tmp;
 
    return MB_SUCCESS;
}

References MB_SUCCESS.

Referenced by eval_set().

jacobianFcn()

ErrorCode moab::LinearTet::jacobianFcn ( const double *  params, const double *  verts, const int  nverts, const int  ndim, double *  work, double *  result  )

static

Evaluate the jacobian at a specified parametric position.

Definition at line 88 of file LinearTet.cpp.

{
    // jacobian is cached in work array
    assert( work );
    std::copy( work, work + 9, result );
    return MB_SUCCESS;
}

References MB_SUCCESS.

Referenced by eval_set().

normalFcn()

ErrorCode moab::LinearTet::normalFcn ( const int  ientDim, const int  facet, const int  nverts, const double *  verts, double  normal[3]  )

static

Evaluate the normal at a specified facet.

Definition at line 198 of file LinearTet.cpp.

{
    // assert(facet < 4 && ientDim == 2 && nverts == 4);
    if( nverts != 4 ) MB_SET_ERR( MB_FAILURE, "Incorrect vertex count for passed tet :: expected value = 4 " );
    if( ientDim != 2 ) MB_SET_ERR( MB_FAILURE, "Requesting normal for unsupported dimension :: expected value = 2 " );
    if( facet > 4 || facet < 0 ) MB_SET_ERR( MB_FAILURE, "Incorrect local face id :: expected value = one of 0-3" );
 
    int id0 = CN::mConnectivityMap[MBTET][ientDim - 1].conn[facet][0];
    int id1 = CN::mConnectivityMap[MBTET][ientDim - 1].conn[facet][1];
    int id2 = CN::mConnectivityMap[MBTET][ientDim - 1].conn[facet][2];
 
    double x0[3], x1[3];
 
    for( int i = 0; i < 3; i++ )
    {
        x0[i] = verts[3 * id1 + i] - verts[3 * id0 + i];
        x1[i] = verts[3 * id2 + i] - verts[3 * id0 + i];
    }
 
    double a   = x0[1] * x1[2] - x1[1] * x0[2];
    double b   = x1[0] * x0[2] - x0[0] * x1[2];
    double c   = x0[0] * x1[1] - x1[0] * x0[1];
    double nrm = sqrt( a * a + b * b + c * c );
 
    if( nrm > std::numeric_limits< double >::epsilon() )
    {
        normal[0] = a / nrm;
        normal[1] = b / nrm;
        normal[2] = c / nrm;
    }
    return MB_SUCCESS;
}

References moab::CN::ConnMap::conn, MB_SET_ERR, MB_SUCCESS, MBTET, and moab::CN::mConnectivityMap.

Referenced by eval_set().

reverseEvalFcn()

ErrorCode moab::LinearTet::reverseEvalFcn ( EvalFcn  eval, JacobianFcn  jacob, InsideFcn  ins, const double *  posn, const double *  verts, const int  nverts, const int  ndim, const double  iter_tol, const double  inside_tol, double *  work, double *  params, int *  is_inside  )

static

Reverse-evaluation of parametric coordinates at physical space position.

Definition at line 96 of file LinearTet.cpp.

{
    assert( posn && verts );
    return evaluate_reverse( eval, jacob, ins, posn, verts, nverts, ndim, iter_tol, inside_tol, work, params,
                             is_inside );
}

References evaluate_reverse().

Referenced by eval_set().

Member Data Documentation

corner

const double moab::LinearTet::corner = { { 0, 0, 0 }, { 1, 0, 0 }, { 0, 1, 0 }, { 0, 0, 1 } }

staticprotected

Definition at line 98 of file LinearTet.hpp.

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The documentation for this class was generated from the following files:

• LinearTet.hpp
• LinearTet.cpp