DataCoupler.cpp

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#include "DataCoupler.hpp"
#include "moab/Tree.hpp"
#include "moab/TupleList.hpp"
#include "moab/SpatialLocator.hpp"
#include "moab/ElemEvaluator.hpp"
#include "moab/Error.hpp"
 
#ifdef MOAB_HAVE_MPI
#include "moab/ParallelComm.hpp"
#endif
 
#include "iostream"
#include <algorithm>
#include <sstream>
 
#include <cstdio>
#include <cassert>
 
namespace moab
{
 
DataCoupler::DataCoupler( Interface* impl,
                          Range& source_ents,
                          int coupler_id,
                          ParallelComm* pc,
                          bool init_locator,
                          int dim )
    : mbImpl( impl ), myPcomm( pc ), myId( coupler_id ), myDim( dim )
{
    assert( NULL != mbImpl && ( myPcomm || !source_ents.empty() ) );
 
    // Now initialize the tree
    if( init_locator )
    {
        myLocator = new SpatialLocator( mbImpl, source_ents );
        myLocator->elem_eval( new ElemEvaluator( mbImpl ) );
 
        // Initialize element evaluator with the default for the entity types in source_ents;
        // can be replaced later by application if desired
        if( !source_ents.empty() )
        {
            Range::pair_iterator pit = source_ents.pair_begin();
            EntityType last_type     = MBMAXTYPE;
            for( ; pit != source_ents.pair_end(); ++pit )
            {
                EntityType this_type = mbImpl->type_from_handle( pit->first );
                if( last_type == this_type ) continue;
                ErrorCode rval = myLocator->elem_eval()->set_eval_set( pit->first );
                if( MB_SUCCESS != rval ) throw( rval );
                last_type = this_type;
            }
        }
    }
 
    if( -1 == dim && !source_ents.empty() ) myDim = mbImpl->dimension_from_handle( *source_ents.rbegin() );
}
 
/* Destructor
 */
DataCoupler::~DataCoupler()
{
    delete myLocator->elem_eval();
    delete myLocator;
}
 
ErrorCode DataCoupler::locate_points( Range& targ_ents,
                                      const double rel_iter_tol,
                                      const double abs_iter_tol,
                                      const double inside_tol )
{
    targetEnts = targ_ents;
 
#ifdef MOAB_HAVE_MPI
    if( myPcomm && myPcomm->size() > 1 )
        return myLocator->par_locate_points( myPcomm, targ_ents, rel_iter_tol, abs_iter_tol, inside_tol );
#endif
 
    return myLocator->locate_points( targ_ents, rel_iter_tol, abs_iter_tol, inside_tol );
}
 
ErrorCode DataCoupler::locate_points( double* xyz,
                                      int num_points,
                                      const double rel_iter_tol,
                                      const double abs_iter_tol,
                                      const double inside_tol )
{
#ifdef MOAB_HAVE_MPI
    if( myPcomm && myPcomm->size() > 1 )
        return myLocator->par_locate_points( myPcomm, xyz, num_points, rel_iter_tol, abs_iter_tol, inside_tol );
#endif
 
    return myLocator->locate_points( xyz, num_points, rel_iter_tol, abs_iter_tol, inside_tol );
}
 
ErrorCode DataCoupler::interpolate( /*DataCoupler::Method*/ int method,
                                    const std::string& interp_tag,
                                    double* interp_vals,
                                    std::vector< int >* point_indices,
                                    bool normalize )
{
    // Tag name input, translate to tag handle and pass down the chain
 
    Tag tag;
    ErrorCode result = mbImpl->tag_get_handle( interp_tag.c_str(), tag );MB_CHK_SET_ERR( result, "Failed to get handle for interpolation tag \"" << interp_tag << "\"" );
 
    return interpolate( method, tag, interp_vals, point_indices, normalize );
}
 
ErrorCode DataCoupler::interpolate( /*DataCoupler::Method*/ int* /* methods */,
                                    Tag* tags,
                                    int* points_per_method,
                                    int num_methods,
                                    double* interp_vals,
                                    std::vector< int >* point_indices,
                                    bool /*normalize*/ )
{
    // Lowest-level interpolate function, does actual interpolation using calls to ElemEvaluator
 
    ErrorCode result = MB_SUCCESS;
 
    unsigned int pts_total = 0;
    for( int i = 0; i < num_methods; i++ )
        pts_total += ( points_per_method ? points_per_method[i] : targetEnts.size() );
 
    unsigned int num_indices = ( point_indices ? point_indices->size() : targetEnts.size() );
    // # points and indices should be identical
    if( pts_total != num_indices ) return MB_FAILURE;
 
    // Since each tuple contains one interpolated tag, if we're interpolating multiple tags, every
    // tuple needs to be able to store up to max tag size
    int max_tsize = -1;
    for( int i = 0; i < num_methods; i++ )
    {
        int tmp_tsize;
        result = mbImpl->tag_get_length( tags[i], tmp_tsize );
        if( MB_SUCCESS != result ) return MB_FAILURE;
        max_tsize = std::max( max_tsize, tmp_tsize );
    }
 
    if( myPcomm && myPcomm->size() > 1 )
    {
        // Build up the tuple list to distribute from my target points; assume that
        // all procs use same method/tag input
        TupleList TLob;  // TLob structure: (pto_i, ridx_i, lidx_i, meth_tagidx_i)
        TLob.initialize( 4, 0, 0, 0, num_indices );
        int tn = 0;  // The tuple number we're currently on
        TLob.enableWriteAccess();
        for( int m = 0; m < num_methods; m++ )
        {
            int num_points = ( points_per_method ? points_per_method[m] : targetEnts.size() );
            for( int j = 0; j < num_points; j++ )
            {
                int idx = ( point_indices ? ( *point_indices )[j]
                                          : j );  // The index in my targetEnts for this interpolation point
 
                // Remote proc/idx from myLocator->parLocTable
                TLob.vi_wr[4 * tn]     = myLocator->par_loc_table().vi_rd[2 * idx];      // proc
                TLob.vi_wr[4 * tn + 1] = myLocator->par_loc_table().vi_rd[2 * idx + 1];  // Remote idx
 
                // Local entity index, tag/method index from my data
                TLob.vi_wr[4 * tn + 2] = idx;
                TLob.vi_wr[4 * tn + 3] = m;
                TLob.inc_n();
                tn++;
            }
        }
 
        // Scatter/gather interpolation points
        myPcomm->proc_config().crystal_router()->gs_transfer( 1, TLob, 0 );
 
        // Perform interpolation on local source mesh; put results into TLinterp
        TupleList TLinterp;  // TLinterp structure: (pto_i, ridx_i, vals[max_tsize]_d)
        TLinterp.initialize( 2, 0, 0, max_tsize, TLob.get_n() );
        TLinterp.set_n( TLob.get_n() );  // Set the size right away
        TLinterp.enableWriteAccess();
 
        for( unsigned int i = 0; i < TLob.get_n(); i++ )
        {
            int lidx = TLob.vi_rd[4 * i + 1];  // Index into myLocator's local table
            // Method and tag indexed with same index
            ///*Method*/ int method = methods[TLob.vi_rd[4*i + 3]];
            Tag tag = tags[TLob.vi_rd[4 * i + 3]];
            // Copy proc/remote index from TLob
            TLinterp.vi_wr[2 * i]     = TLob.vi_rd[4 * i];
            TLinterp.vi_wr[2 * i + 1] = TLob.vi_rd[4 * i + 2];
 
            // Set up the evaluator for the tag and entity, then interpolate, putting result in
            // TLinterp
            myLocator->elem_eval()->set_tag_handle( tag );
            myLocator->elem_eval()->set_ent_handle( myLocator->loc_table().vul_rd[lidx] );
            result =
                myLocator->elem_eval()->eval( myLocator->loc_table().vr_rd + 3 * lidx, TLinterp.vr_rd + i * max_tsize );
            if( MB_SUCCESS != result ) return result;
        }
 
        // Scatter/gather interpolation data
        myPcomm->proc_config().crystal_router()->gs_transfer( 1, TLinterp, 0 );
 
        // Copy the interpolated field as a unit
        std::copy( TLinterp.vr_rd, TLinterp.vr_rd + TLinterp.get_n() * max_tsize, interp_vals );
    }
    else
    {
        // If called serially, interpolate directly from local locations/entities,
        // into either interp_vals or by setting data directly on tags on those entities
        std::vector< double > tmp_vals;
        std::vector< EntityHandle > tmp_ents;
        double* tmp_dbl = interp_vals;
        for( int i = 0; i < num_methods; i++ )
        {
            int num_points = ( points_per_method ? points_per_method[i] : targetEnts.size() );
 
            // Interpolated data is tsize long, which is either max size (if data passed back to
            // caller in interp_vals) or tag size (if data will be set on entities, in which case it
            // shouldn't have padding) set sizes here, inside loop over methods, to reduce memory
            // usage
            int tsize = max_tsize, tsize_bytes = 0;
            if( !interp_vals )
            {
                tmp_vals.resize( num_points * max_tsize );
                tmp_dbl = &tmp_vals[0];
                tmp_ents.resize( num_points );
                result = mbImpl->tag_get_length( tags[i], tsize );
                if( MB_SUCCESS != result ) return result;
                result = mbImpl->tag_get_bytes( tags[i], tsize_bytes );
                if( MB_SUCCESS != result ) return result;
            }
 
            for( int j = 0; j < num_points; j++ )
            {
                int lidx;
                if( point_indices )
                    lidx = ( *point_indices )[j];
                else
                    lidx = j;
 
                myLocator->elem_eval()->set_tag_handle( tags[i] );
                myLocator->elem_eval()->set_ent_handle( myLocator->loc_table().vul_rd[lidx] );
                if( !interp_vals ) tmp_ents[j] = targetEnts[lidx];  // Could be performance-sensitive, thus the if test
                result = myLocator->elem_eval()->eval( myLocator->loc_table().vr_rd + 3 * lidx, tmp_dbl );
                tmp_dbl += tsize;
                if( MB_SUCCESS != result ) return result;
            }  // for j over points
 
            if( !interp_vals )
            {
                // Set tags on tmp_ents; data is already w/o padding, due to tsize setting above
                result = mbImpl->tag_set_data( tags[i], &tmp_ents[0], tmp_ents.size(), &tmp_vals[0] );
                if( MB_SUCCESS != result ) return result;
            }
 
        }  // for i over methods
    }      // if myPcomm
 
    // Done
    return MB_SUCCESS;
}
 
}  // namespace moab