BitTag.hpp

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#ifndef BIT_TAG_HPP
#define BIT_TAG_HPP
 
#include "TagInfo.hpp"
#include "Internals.hpp"
#include <algorithm>
#include <vector>
#include <cassert>
 
namespace moab
{
 
class BitPage;
 
/**\brief data for a single bit tag */
class BitTag : public TagInfo
{
  private:
    BitTag( const char* name, int size, const void* default_value )
        : TagInfo( name, size, MB_TYPE_BIT, default_value, default_value ? 1 : 0 ), requestedBitsPerEntity( 0 ),
          storedBitsPerEntity( 0 ), pageShift( 0 )
    {
    }
 
  public:
    static BitTag* create_tag( const char* name, int size, const void* default_value = 0 );
 
    virtual ~BitTag();
 
    virtual TagType get_storage_type() const;
 
    /**\brief Remove/clear tag data for all entities
     *
     * Remove tag values from entities.
     *
     *\param delete_pending  If true, then release any global
     *          data associated with the tag in preparation for deleting
     *          the tag itself.
     *
     *\Note Invalidates tag if \c tag_delete_pending is true.  The only
     *        valid method that can be invoked that is is the destructor.
     *
     *\param seqman    Pointer to mesh entity database
     */
    virtual ErrorCode release_all_data( SequenceManager* seqman, Error* error_handler, bool delete_pending );
 
    /**\brief Get tag value for passed entities
     *
     * Get tag values for specified entities.
     *
     *\Note Will fail for variable-length data.
     *\param seqman Pointer to mesh entity database
     *\param entities Entity handles for which to retrieve tag data
     *\param num_entities Length of \c entities array
     *\param data Pointer to memory in which to store consecutive tag values,
     *            one for each passed entity.
     */
    virtual ErrorCode get_data( const SequenceManager* seqman,
                                Error* error_handler,
                                const EntityHandle* entities,
                                size_t num_entities,
                                void* data ) const;
 
    /**\brief Get tag value for passed entities
     *
     * Get tag values for specified entities.
     *
     *\Note Will fail for variable-length data.
     *\param seqman Pointer to mesh entity database
     *\param entities Entity handles for which to retrieve tag data
     *\param data Pointer to memory in which to store consecutive tag values,
     *            one for each passed entity.
     */
    virtual ErrorCode get_data( const SequenceManager* seqman,
                                Error* error_handler,
                                const Range& entities,
                                void* data ) const;
 
    /**\brief Get tag value for passed entities
     *
     * Get tag values for specified entities.
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to retrieve tag data
     *\param num_entities Length of \c entities array
     *\param data_ptrs Array of pointers to tag values, one pointer
     *                 for each passed entity.
     *\param data_lengths One value for each entity specifying the
     *                length of the tag value for the corresponding
     *                entity.
     */
    virtual ErrorCode get_data( const SequenceManager* seqman,
                                Error* error_handler,
                                const EntityHandle* entities,
                                size_t num_entities,
                                const void** data_ptrs,
                                int* data_lengths ) const;
 
    /**\brief Get tag value for passed entities
     *
     * Get tag values for specified entities.
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to retrieve tag data
     *\param data_ptrs Array of pointers to tag values, one pointer
     *                 for each passed entity.
     *\param data_lengths One value for each entity specifying the
     *                length of the tag value for the corresponding
     *                entity.
     */
    virtual ErrorCode get_data( const SequenceManager* seqman,
                                Error* error_handler,
                                const Range& entities,
                                const void** data_ptrs,
                                int* data_lengths ) const;
 
    /**\brief Set tag value for passed entities
     *
     * Store tag data or update stored tag values
     *\Note Will fail for variable-length data.
     *\param seqman Pointer to mesh entity database
     *\param entities Entity handles for which to store tag data
     *\param num_entities Length of \c entities array
     *\param data Pointer to memory holding consecutive tag values,
     *            one for each passed entity.
     */
    virtual ErrorCode set_data( SequenceManager* seqman,
                                Error* error_handler,
                                const EntityHandle* entities,
                                size_t num_entities,
                                const void* data );
 
    /**\brief Set tag value for passed entities
     *
     * Store tag data or update stored tag values
     *\Note Will fail for variable-length data.
     *\param seqman Pointer to mesh entity database
     *\param entities Entity handles for which to store tag data
     *\param data Pointer to memory holding consecutive tag values,
     *            one for each passed entity.
     */
    virtual ErrorCode set_data( SequenceManager* seqman,
                                Error* error_handler,
                                const Range& entities,
                                const void* data );
 
    /**\brief Set tag value for passed entities
     *
     * Store tag data or update stored tag values
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to store tag data
     *\param num_entities Length of \c entities array
     *\param data_ptrs Array of pointers to tag values, one pointer
     *                 for each passed entity.
     *\param data_lengths One value for each entity specifying the
     *                length of the tag value for the corresponding
     *                entity.  Array is required for variable-length
     *                tags and is ignored for fixed-length tags.
     */
    virtual ErrorCode set_data( SequenceManager* seqman,
                                Error* error_handler,
                                const EntityHandle* entities,
                                size_t num_entities,
                                void const* const* data_ptrs,
                                const int* data_lengths );
 
    /**\brief Set tag value for passed entities
     *
     * Store tag data or update stored tag values
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to store tag data
     *\param data_ptrs Array of pointers to tag values, one pointer
     *                 for each passed entity.
     *\param data_lengths One value for each entity specifying the
     *                length of the tag value for the corresponding
     *                entity.  Array is required for variable-length
     *                tags and is ignored for fixed-length tags.
     */
    virtual ErrorCode set_data( SequenceManager* seqman,
                                Error* error_handler,
                                const Range& entities,
                                void const* const* data_ptrs,
                                const int* data_lengths );
 
    /**\brief Set tag value for passed entities
     *
     * Store tag data or update stored tag values.
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to store tag data
     *\param num_entities Length of \c entities array
     *\param value_ptr Pointer to a single tag value which is to be
     *                 stored for each of the passed entities.
     *\param value_len Length of tag value in bytes.  Ignored for
     *                 fixed-length tags.  Required for variable-
     *                 length tags.
     */
    virtual ErrorCode clear_data( SequenceManager* seqman,
                                  Error* error_handler,
                                  const EntityHandle* entities,
                                  size_t num_entities,
                                  const void* value_ptr,
                                  int value_len = 0 );
 
    /**\brief Set tag value for passed entities
     *
     * Store tag data or update stored tag values.
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to store tag data
     *\param value_ptr Pointer to a single tag value which is to be
     *                 stored for each of the passed entities.
     *\param value_len Length of tag value in bytes.  Ignored for
     *                 fixed-length tags.  Required for variable-
     *                 length tags.
     */
    virtual ErrorCode clear_data( SequenceManager* seqman,
                                  Error* error_handler,
                                  const Range& entities,
                                  const void* value_ptr,
                                  int value_len = 0 );
 
    /**\brief Remove/clear tag data for entities
     *
     * Remove tag values from entities.
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to store tag data
     *\param num_entities Length of \c entities array
     */
    virtual ErrorCode remove_data( SequenceManager* seqman,
                                   Error* error_handler,
                                   const EntityHandle* entities,
                                   size_t num_entities );
 
    /**\brief Remove/clear tag data for entities
     *
     * Remove tag values from entities.
     *
     *\param seqman    Pointer to mesh entity database
     *\param entities  Entity handles for which to store tag data
     */
    virtual ErrorCode remove_data( SequenceManager* seqman, Error* error_handler, const Range& entities );
 
    /**\brief Access tag data via direct pointer into contiguous blocks
     *
     * Iteratively obtain direct access to contiguous blocks of tag
     * storage.  This function cannot be used with bit tags because
     * of the compressed bit storage.  This function cannot be used
     * with variable length tags because it does not provide a mechanism
     * to determine the length of the value for each entity.  This
     * function may be used with sparse tags, but if it is used, it
     * will return data for a single entity at a time.
     *
     *\param iter        As input, the first entity for which to return
     *                   data.  As output, one past the last entity for
     *                   which data was returned.
     *\param end         One past the last entity for which data is desired
     *\param data_ptr    Output: pointer to tag storage.
     *
     *\Note If this function is called for entities for which no tag value
     *      has been set, but for which a default value exists, it will
     *      force the allocation of explicit storage for each such entity
     *      even though MOAB would normally not explicitly store tag values
     *      for such entities.
     */
    virtual ErrorCode tag_iterate( SequenceManager* seqman,
                                   Error* error_handler,
                                   Range::iterator& iter,
                                   const Range::iterator& end,
                                   void*& data_ptr,
                                   bool allocate = true );
 
    /**\brief Get all tagged entities
     *
     * Get the list of entities for which the a tag value has been set,
     * or a close approximation if the tag storage scheme cannot
     * accurately determine exactly which entities have explicit values.
     *
     *\param seqman   Pointer to entity storage database
     *\param output_entities Results *appended* to this range
     *\param type     Optional entity type.  If specified, search is
     *                limited to entities of specified type.
     *\param intersect Optional intersect list.  If specified,
     *                search is restricted to entities in this list.
     */
    virtual ErrorCode get_tagged_entities( const SequenceManager* seqman,
                                           Range& output_entities,
                                           EntityType type        = MBMAXTYPE,
                                           const Range* intersect = 0 ) const;
 
    /**\brief Count all tagged entities
     *
     * Count the entities for which the a tag value has been set,
     * or a close approximation if the tag storage scheme cannot
     * accurately determine exactly which entities have explicit values.
     *
     *\param seqman   Pointer to entity storage database
     *\param output_count This is *incremented* for each detected entity.
     *\param type     Optional entity type.  If specified, search is
     *                limited to entities of specified type.
     *\param intersect Optional intersect list.  If specified,
     *                search is restricted to entities in this list.
     */
    virtual ErrorCode num_tagged_entities( const SequenceManager* seqman,
                                           size_t& output_count,
                                           EntityType type        = MBMAXTYPE,
                                           const Range* intersect = 0 ) const;
 
    /**\brief Get all tagged entities with tag value
     *
     * Get the list of entities which have the specified tag value.
     *
     *\param seqman   Pointer to entity storage database
     *\param output_entities Results *appended* to this range
     *\param value    Pointer to tag value
     *\param value_bytes Size of tag value in bytes.
     *\param type     Optional entity type.  If specified, search is
     *                limited to entities of specified type.
     *\param intersect_entities Optional intersect list.  If specified,
     *                search is restricted to entities in this list.
     */
    virtual ErrorCode find_entities_with_value( const SequenceManager* seqman,
                                                Error* error_handler,
                                                Range& output_entities,
                                                const void* value,
                                                int value_bytes                 = 0,
                                                EntityType type                 = MBMAXTYPE,
                                                const Range* intersect_entities = 0 ) const;
 
    /**\brief Check if entity is tagged */
    virtual bool is_tagged( const SequenceManager*, EntityHandle h ) const;
 
    /**\brief Get memory use for tag data.
     *
     */
    ErrorCode get_memory_use( const SequenceManager* seqman, unsigned long& total, unsigned long& per_entity ) const;
 
    /**\brief Get entities for which an explicit tag of the specified value is stored */
    ErrorCode get_entities_with_bits( EntityType type, Range& entities, unsigned char bits ) const;
 
    /**\brief Get entities for which an explicit tag of the specified value is stored */
    ErrorCode get_entities_with_bits( const Range& range, EntityType type, Range& entities, unsigned char bits ) const;
 
    enum
    {
        Ln2PageSize = 12,                    //!< Constant: log2(PageSize)
        PageSize    = ( 1u << Ln2PageSize )  //!< Constant: Bytes per BitPage (power of 2)
    };
 
  private:
    BitTag( const BitTag& );
    BitTag& operator=( const BitTag& );
    ErrorCode reserve( unsigned bits );
 
    inline unsigned char default_val() const
    {
        if( get_default_value() )
            return *reinterpret_cast< const unsigned char* >( get_default_value() );
        else
            return 0;
    }
 
    std::vector< BitPage* > pageList[MBMAXTYPE];  //!< Array of BitPage instances storing actual data.
    unsigned int requestedBitsPerEntity;          //!< user-requested bits per entity
    unsigned int storedBitsPerEntity;             //!< allocated bits per entity (power of 2)
    unsigned int pageShift;                       //!< log2( ents_per_page() )
 
    /**\brief Get indices from handle
     *
     *\param type   Output: entity type
     *\param page   Output: index into pageList[type]
     *\param offset Output: index into pageList[type][page]
     */
    void unpack( EntityHandle h, EntityType& type, size_t& page, int& offset ) const
    {
        type   = TYPE_FROM_HANDLE( h );
        h      = ID_FROM_HANDLE( h );
        page   = ( (size_t)h ) >> pageShift;        // h / ents_per_page()
        offset = h & ( ( 1u << pageShift ) - 1u );  // h % ends_per_page()
    }
 
    /**\brief Get the number of tag values that are stored in each BitPage */
    int ents_per_page() const
    {
        return 8 * PageSize / storedBitsPerEntity;
    }
 
    template < class Container >
    inline void get_tagged( EntityType type, Container& entities ) const;
    template < class Container >
    inline void get_tagged( Range::const_iterator begin, Range::const_iterator end, Container& entities ) const;
    template < class Container >
    inline void get_tagged( Container& entities, EntityType type, const Range* intersect ) const;
};
 
}  // namespace moab
 
#endif