Actual source code: petscsys.h
petsc-3.8.4 2018-03-24
1: /*
2: This is the main PETSc include file (for C and C++). It is included by all
3: other PETSc include files, so it almost never has to be specifically included.
4: */
7: /* ========================================================================== */
8: /*
9: petscconf.h is contained in ${PETSC_ARCH}/include/petscconf.h it is
10: found automatically by the compiler due to the -I${PETSC_DIR}/${PETSC_ARCH}/include.
11: For --prefix installs the ${PETSC_ARCH}/ does not exist and petscconf.h is in the same
12: directory as the other PETSc include files.
13: */
14: #include <petscconf.h>
15: #include <petscfix.h>
17: #if defined(PETSC_DESIRE_FEATURE_TEST_MACROS)
18: /*
19: Feature test macros must be included before headers defined by IEEE Std 1003.1-2001
20: We only turn these in PETSc source files that require them by setting PETSC_DESIRE_FEATURE_TEST_MACROS
21: */
22: #if defined(PETSC__POSIX_C_SOURCE_200112L) && !defined(_POSIX_C_SOURCE)
23: #define _POSIX_C_SOURCE 200112L
24: #endif
25: #if defined(PETSC__BSD_SOURCE) && !defined(_BSD_SOURCE)
26: #define _BSD_SOURCE
27: #endif
28: #if defined(PETSC__DEFAULT_SOURCE) && !defined(_DEFAULT_SOURCE)
29: #define _DEFAULT_SOURCE
30: #endif
31: #if defined(PETSC__GNU_SOURCE) && !defined(_GNU_SOURCE)
32: #define _GNU_SOURCE
33: #endif
34: #endif
36: /* ========================================================================== */
37: /*
38: This facilitates using the C version of PETSc from C++ and the C++ version from C.
39: */
40: #if defined(__cplusplus)
41: # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_CXX
42: #else
43: # define PETSC_FUNCTION_NAME PETSC_FUNCTION_NAME_C
44: #endif
46: /* ========================================================================== */
47: /*
48: Since PETSc manages its own extern "C" handling users should never include PETSc include
49: files within extern "C". This will generate a compiler error if a user does put the include
50: file within an extern "C".
51: */
52: #if defined(__cplusplus)
53: void assert_never_put_petsc_headers_inside_an_extern_c(int); void assert_never_put_petsc_headers_inside_an_extern_c(double);
54: #endif
56: #if defined(__cplusplus)
57: # define PETSC_RESTRICT PETSC_CXX_RESTRICT
58: #else
59: # define PETSC_RESTRICT PETSC_C_RESTRICT
60: #endif
62: #if defined(__cplusplus)
63: # define PETSC_STATIC_INLINE PETSC_CXX_STATIC_INLINE
64: #else
65: # define PETSC_STATIC_INLINE PETSC_C_STATIC_INLINE
66: #endif
68: #if defined(_WIN32) && defined(PETSC_USE_SHARED_LIBRARIES) /* For Win32 shared libraries */
69: # define __declspec(dllexport)
70: # define PETSC_DLLIMPORT __declspec(dllimport)
71: # define PETSC_VISIBILITY_INTERNAL
72: #elif defined(PETSC_USE_VISIBILITY_CXX) && defined(__cplusplus)
73: # define __attribute__((visibility ("default")))
74: # define PETSC_DLLIMPORT __attribute__((visibility ("default")))
75: # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden")))
76: #elif defined(PETSC_USE_VISIBILITY_C) && !defined(__cplusplus)
77: # define __attribute__((visibility ("default")))
78: # define PETSC_DLLIMPORT __attribute__((visibility ("default")))
79: # define PETSC_VISIBILITY_INTERNAL __attribute__((visibility ("hidden")))
80: #else
81: # define
82: # define PETSC_DLLIMPORT
83: # define PETSC_VISIBILITY_INTERNAL
84: #endif
86: #if defined(petsc_EXPORTS) /* CMake defines this when building the shared library */
87: # define PETSC_VISIBILITY_PUBLIC
88: #else /* Win32 users need this to import symbols from petsc.dll */
89: # define PETSC_VISIBILITY_PUBLIC PETSC_DLLIMPORT
90: #endif
92: /*
93: Functions tagged with PETSC_EXTERN in the header files are
94: always defined as extern "C" when compiled with C++ so they may be
95: used from C and are always visible in the shared libraries
96: */
97: #if defined(__cplusplus)
98: #define PETSC_EXTERN extern "C" PETSC_VISIBILITY_PUBLIC
99: #define PETSC_EXTERN_TYPEDEF extern "C"
100: #define PETSC_INTERN extern "C" PETSC_VISIBILITY_INTERNAL
101: #else
102: #define PETSC_EXTERN extern PETSC_VISIBILITY_PUBLIC
103: #define PETSC_EXTERN_TYPEDEF
104: #define PETSC_INTERN extern PETSC_VISIBILITY_INTERNAL
105: #endif
107: #include <petscversion.h>
108: #define PETSC_AUTHOR_INFO " The PETSc Team\n petsc-maint@mcs.anl.gov\n http://www.mcs.anl.gov/petsc/\n"
110: /* ========================================================================== */
112: /*
113: Defines the interface to MPI allowing the use of all MPI functions.
115: PETSc does not use the C++ binding of MPI at ALL. The following flag
116: makes sure the C++ bindings are not included. The C++ bindings REQUIRE
117: putting mpi.h before ANY C++ include files, we cannot control this
118: with all PETSc users. Users who want to use the MPI C++ bindings can include
119: mpicxx.h directly in their code
120: */
121: #if !defined(MPICH_SKIP_MPICXX)
122: # define MPICH_SKIP_MPICXX 1
123: #endif
124: #if !defined(OMPI_SKIP_MPICXX)
125: # define OMPI_SKIP_MPICXX 1
126: #endif
127: #if !defined(OMPI_WANT_MPI_INTERFACE_WARNING)
128: # define OMPI_WANT_MPI_INTERFACE_WARNING 0
129: #endif
130: #include <mpi.h>
132: /*
133: Perform various sanity checks that the correct mpi.h is being included at compile time.
134: This usually happens because
135: * either an unexpected mpi.h is in the default compiler path (i.e. in /usr/include) or
136: * an extra include path -I/something (which contains the unexpected mpi.h) is being passed to the compiler
137: */
138: #if defined(PETSC_HAVE_MPIUNI)
139: # if !defined(__MPIUNI_H)
140: # error "PETSc was configured with --with-mpi=0 but now appears to be compiling using a different mpi.h"
141: # endif
142: #elif defined(PETSC_HAVE_I_MPI_NUMVERSION)
143: # if !defined(I_MPI_NUMVERSION)
144: # error "PETSc was configured with I_MPI but now appears to be compiling using a non-I_MPI mpi.h"
145: # elif I_MPI_NUMVERSION != PETSC_HAVE_I_MPI_NUMVERSION
146: # error "PETSc was configured with one I_MPI mpi.h version but now appears to be compiling using a different I_MPI mpi.h version"
147: # endif
148: #elif defined(PETSC_HAVE_MVAPICH2_NUMVERSION)
149: # if !defined(MVAPICH2_NUMVERSION)
150: # error "PETSc was configured with MVAPICH2 but now appears to be compiling using a non-MVAPICH2 mpi.h"
151: # elif MVAPICH2_NUMVERSION != PETSC_HAVE_MVAPICH2_NUMVERSION
152: # error "PETSc was configured with one MVAPICH2 mpi.h version but now appears to be compiling using a different MVAPICH2 mpi.h version"
153: # endif
154: #elif defined(PETSC_HAVE_MPICH_NUMVERSION)
155: # if !defined(MPICH_NUMVERSION) || defined(MVAPICH2_NUMVERSION) || defined(I_MPI_NUMVERSION)
156: # error "PETSc was configured with MPICH but now appears to be compiling using a non-MPICH mpi.h"
157: # elif (MPICH_NUMVERSION/100000 != PETSC_HAVE_MPICH_NUMVERSION/100000) || (MPICH_NUMVERSION%100000/1000 < PETSC_HAVE_MPICH_NUMVERSION%100000/1000)
158: # error "PETSc was configured with one MPICH mpi.h version but now appears to be compiling using a different MPICH mpi.h version"
159: # endif
160: #elif defined(PETSC_HAVE_OMPI_MAJOR_VERSION)
161: # if !defined(OMPI_MAJOR_VERSION)
162: # error "PETSc was configured with OpenMPI but now appears to be compiling using a non-OpenMPI mpi.h"
163: # elif (OMPI_MAJOR_VERSION != PETSC_HAVE_OMPI_MAJOR_VERSION) || (OMPI_MINOR_VERSION != PETSC_HAVE_OMPI_MINOR_VERSION) || (OMPI_RELEASE_VERSION < PETSC_HAVE_OMPI_RELEASE_VERSION)
164: # error "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version"
165: # endif
166: #elif defined(OMPI_MAJOR_VERSION) || defined(MPICH_NUMVERSION)
167: # error "PETSc was configured with undetermined MPI - but now appears to be compiling using either of OpenMPI or a MPICH variant"
168: #endif
170: /*
171: Need to put stdio.h AFTER mpi.h for MPICH2 with C++ compiler
172: see the top of mpicxx.h in the MPICH2 distribution.
173: */
174: #include <stdio.h>
176: /* MSMPI on 32bit windows requires this yukky hack - that breaks MPI standard compliance */
177: #if !defined(MPIAPI)
178: #define MPIAPI
179: #endif
181: /*
182: Support for Clang (>=3.2) matching type tag arguments with void* buffer types.
183: This allows the compiler to detect cases where the MPI datatype argument passed to a MPI routine
184: does not match the actual type of the argument being passed in
185: */
186: #if defined(__has_attribute) && defined(works_with_const_which_is_not_true)
187: # if __has_attribute(argument_with_type_tag) && __has_attribute(pointer_with_type_tag) && __has_attribute(type_tag_for_datatype)
188: # define PetscAttrMPIPointerWithType(bufno,typeno) __attribute__((pointer_with_type_tag(MPI,bufno,typeno)))
189: # define PetscAttrMPITypeTag(type) __attribute__((type_tag_for_datatype(MPI,type)))
190: # define PetscAttrMPITypeTagLayoutCompatible(type) __attribute__((type_tag_for_datatype(MPI,type,layout_compatible)))
191: # endif
192: #endif
193: #if !defined(PetscAttrMPIPointerWithType)
194: # define PetscAttrMPIPointerWithType(bufno,typeno)
195: # define PetscAttrMPITypeTag(type)
196: # define PetscAttrMPITypeTagLayoutCompatible(type)
197: #endif
199: /*MC
200: PetscErrorCode - datatype used for return error code from almost all PETSc functions
202: Level: beginner
204: .seealso: CHKERRQ, SETERRQ
205: M*/
206: typedef int PetscErrorCode;
208: /*MC
210: PetscClassId - A unique id used to identify each PETSc class.
212: Notes:
213: Use PetscClassIdRegister() to obtain a new value for a new class being created. Usually
214: XXXInitializePackage() calls it for each class it defines.
216: Developer Notes:
217: Internal integer stored in the _p_PetscObject data structure.
218: These are all computed by an offset from the lowest one, PETSC_SMALLEST_CLASSID.
220: Level: developer
222: .seealso: PetscClassIdRegister(), PetscLogEventRegister(), PetscHeaderCreate()
223: M*/
224: typedef int PetscClassId;
227: /*MC
228: PetscMPIInt - datatype used to represent 'int' parameters to MPI functions.
230: Level: intermediate
232: Notes:
233: usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
234: standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt; it remains 32 bit.
236: PetscMPIIntCast(a,&b) checks if the given PetscInt a will fit in a PetscMPIInt, if not it
237: generates a PETSC_ERR_ARG_OUTOFRANGE error.
239: .seealso: PetscBLASInt, PetscInt, PetscMPIIntCast()
241: M*/
242: typedef int PetscMPIInt;
244: /*MC
245: PetscEnum - datatype used to pass enum types within PETSc functions.
247: Level: intermediate
249: .seealso: PetscOptionsGetEnum(), PetscOptionsEnum(), PetscBagRegisterEnum()
250: M*/
251: typedef enum { ENUM_DUMMY } PetscEnum;
252: PETSC_EXTERN MPI_Datatype MPIU_ENUM PetscAttrMPITypeTag(PetscEnum);
254: #if defined(PETSC_HAVE_STDINT_H)
255: #include <stdint.h>
256: #endif
257: #if defined (PETSC_HAVE_INTTYPES_H)
259: #include <inttypes.h>
260: # if !defined(PRId64)
261: # define PRId64 "ld"
262: # endif
263: #endif
265: typedef short PetscShort;
266: typedef char PetscChar;
267: typedef float PetscFloat;
269: /*MC
270: PetscInt - PETSc type that represents an integer, used primarily to
271: represent size of arrays and indexing into arrays. Its size can be configured with the option --with-64-bit-indices to be either 32-bit (default) or 64-bit.
273: Notes:
274: For MPI calls that require datatypes, use MPIU_INT as the datatype for PetscInt. It will automatically work correctly regardless of the size of PetscInt.
276: Level: beginner
278: .seealso: PetscBLASInt, PetscMPIInt, PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT
279: M*/
281: /*MC
282: MPIU_INT - MPI datatype corresponding to PetscInt
284: Notes:
285: In MPI calls that require an MPI datatype that matches a PetscInt or array of PetscInt values, pass this value.
287: Level: beginner
289: .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX
290: M*/
292: #if defined(PETSC_HAVE_STDINT_H) && defined(PETSC_HAVE_INTTYPES_H) && defined(PETSC_HAVE_MPI_INT64_T) /* MPI_INT64_T is not guaranteed to be a macro */
293: typedef int64_t PetscInt64;
294: # define MPIU_INT64 MPI_INT64_T
295: # define PetscInt64_FMT PRId64
296: #elif (PETSC_SIZEOF_LONG_LONG == 8)
297: typedef long long PetscInt64;
298: # define MPIU_INT64 MPI_LONG_LONG_INT
299: # define PetscInt64_FMT "lld"
300: #elif defined(PETSC_HAVE___INT64)
301: typedef __int64 PetscInt64;
302: # define MPIU_INT64 MPI_INT64_T
303: # define PetscInt64_FMT "ld"
304: #else
305: #error "cannot determine PetscInt64 type"
306: #endif
307: #if defined(PETSC_USE_64BIT_INDICES)
308: typedef PetscInt64 PetscInt;
309: #define MPIU_INT MPIU_INT64
310: #define PetscInt_FMT PetscInt64_FMT
311: #else
312: typedef int PetscInt;
313: #define MPIU_INT MPI_INT
314: #define PetscInt_FMT "d"
315: #endif
317: /*MC
318: PetscBLASInt - datatype used to represent 'int' parameters to BLAS/LAPACK functions.
320: Notes:
321: Usually this is the same as PetscInt, but if PETSc was built with --with-64-bit-indices but
322: standard C/Fortran integers are 32 bit then this is NOT the same as PetscInt it remains 32 bit
323: (except on very rare BLAS/LAPACK implementations that support 64 bit integers see the note below).
325: PetscErrorCode PetscBLASIntCast(a,&b) checks if the given PetscInt a will fit in a PetscBLASInt, if not it
326: generates a PETSC_ERR_ARG_OUTOFRANGE error
328: Installation Notes:
329: The 64bit versions of MATLAB ship with BLAS and LAPACK that use 64 bit integers for sizes etc,
330: if you run ./configure with the option
331: --with-blaslapack-lib=[/Applications/MATLAB_R2010b.app/bin/maci64/libmwblas.dylib,/Applications/MATLAB_R2010b.app/bin/maci64/libmwlapack.dylib]
332: but you need to also use --known-64-bit-blas-indices.
334: MKL also ships with 64 bit integer versions of the BLAS and LAPACK, if you select those you must also ./configure with
335: --known-64-bit-blas-indices
337: OpenBLAS can also be built to use 64 bit integers. The ./configure options --download-openblas -download-openblas-64-bit-blas-indices
338: will build a 64 bit integer version
340: Developer Notes:
341: Eventually ./configure should automatically determine the size of the integers used by BLAS/LAPACK.
343: External packages such as hypre, ML, SuperLU etc do not provide any support for passing 64 bit integers to BLAS/LAPACK so cannot
344: be used with PETSc if you have set PetscBLASInt to long int.
346: Level: intermediate
348: .seealso: PetscMPIInt, PetscInt, PetscBLASIntCast()
350: M*/
351: #if defined(PETSC_HAVE_64BIT_BLAS_INDICES)
352: typedef PetscInt64 PetscBLASInt;
353: #else
354: typedef int PetscBLASInt;
355: #endif
357: /*
358: For the rare cases when one needs to send a size_t object with MPI
359: */
360: #if (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_INT)
361: #define MPIU_SIZE_T MPI_UNSIGNED
362: #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG)
363: #define MPIU_SIZE_T MPI_UNSIGNED_LONG
364: #elif (PETSC_SIZEOF_SIZE_T) == (PETSC_SIZEOF_LONG_LONG)
365: #define MPIU_SIZE_T MPI_UNSIGNED_LONG_LONG
366: #else
367: #error "Unknown size for size_t! Send us a bugreport at petsc-maint@mcs.anl.gov"
368: #endif
370: /*
371: You can use PETSC_STDOUT as a replacement of stdout. You can also change
372: the value of PETSC_STDOUT to redirect all standard output elsewhere
373: */
374: PETSC_EXTERN FILE* PETSC_STDOUT;
376: /*
377: You can use PETSC_STDERR as a replacement of stderr. You can also change
378: the value of PETSC_STDERR to redirect all standard error elsewhere
379: */
380: PETSC_EXTERN FILE* PETSC_STDERR;
382: /*MC
383: PetscUnlikely - hints the compiler that the given condition is usually FALSE
385: Synopsis:
386: #include <petscsys.h>
387: PetscBool PetscUnlikely(PetscBool cond)
389: Not Collective
391: Input Parameters:
392: . cond - condition or expression
394: Notes:
395: This returns the same truth value, it is only a hint to compilers that the resulting
396: branch is unlikely.
398: Level: advanced
400: .seealso: PetscLikely(), CHKERRQ
401: M*/
403: /*MC
404: PetscLikely - hints the compiler that the given condition is usually TRUE
406: Synopsis:
407: #include <petscsys.h>
408: PetscBool PetscLikely(PetscBool cond)
410: Not Collective
412: Input Parameters:
413: . cond - condition or expression
415: Notes:
416: This returns the same truth value, it is only a hint to compilers that the resulting
417: branch is likely.
419: Level: advanced
421: .seealso: PetscUnlikely()
422: M*/
423: #if defined(PETSC_HAVE_BUILTIN_EXPECT)
424: # define PetscUnlikely(cond) __builtin_expect(!!(cond),0)
425: # define PetscLikely(cond) __builtin_expect(!!(cond),1)
426: #else
427: # define PetscUnlikely(cond) (cond)
428: # define PetscLikely(cond) (cond)
429: #endif
431: /*
432: Declare extern C stuff after including external header files
433: */
436: /*
437: Basic PETSc constants
438: */
440: /*E
441: PetscBool - Logical variable. Actually an int in C and a logical in Fortran.
443: Level: beginner
445: Developer Note:
446: Why have PetscBool , why not use bool in C? The problem is that K and R C, C99 and C++ all have different mechanisms for
447: boolean values. It is not easy to have a simple macro that that will work properly in all circumstances with all three mechanisms.
449: .seealso: PETSC_TRUE, PETSC_FALSE, PetscNot()
450: E*/
451: typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;
452: PETSC_EXTERN const char *const PetscBools[];
453: PETSC_EXTERN MPI_Datatype MPIU_BOOL PetscAttrMPITypeTag(PetscBool);
455: /*
456: Defines elementary mathematics functions and constants.
457: */
458: #include <petscmath.h>
460: /*E
461: PetscCopyMode - Determines how an array passed to certain functions is copied or retained
463: Level: beginner
465: $ PETSC_COPY_VALUES - the array values are copied into new space, the user is free to reuse or delete the passed in array
466: $ PETSC_OWN_POINTER - the array values are NOT copied, the object takes ownership of the array and will free it later, the user cannot change or
467: $ delete the array. The array MUST have been obtained with PetscMalloc(). Hence this mode cannot be used in Fortran.
468: $ PETSC_USE_POINTER - the array values are NOT copied, the object uses the array but does NOT take ownership of the array. The user cannot use
469: the array but the user must delete the array after the object is destroyed.
471: E*/
472: typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;
473: PETSC_EXTERN const char *const PetscCopyModes[];
475: /*MC
476: PETSC_FALSE - False value of PetscBool
478: Level: beginner
480: Note:
481: Zero integer
483: .seealso: PetscBool, PETSC_TRUE
484: M*/
486: /*MC
487: PETSC_TRUE - True value of PetscBool
489: Level: beginner
491: Note:
492: Nonzero integer
494: .seealso: PetscBool, PETSC_FALSE
495: M*/
497: /*MC
498: PETSC_IGNORE - same as NULL, means PETSc will ignore this argument
500: Level: beginner
502: Note:
503: Accepted by many PETSc functions to not set a parameter and instead use
504: some default
506: Fortran Notes:
507: This macro does not exist in Fortran; you must use PETSC_NULL_INTEGER,
508: PETSC_NULL_DOUBLE_PRECISION etc
510: .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_DETERMINE
512: M*/
513: #define PETSC_IGNORE NULL
515: /* This is deprecated */
516: #define PETSC_NULL NULL
518: /*MC
519: PETSC_DECIDE - standard way of passing in integer or floating point parameter
520: where you wish PETSc to use the default.
522: Level: beginner
524: .seealso: PETSC_DEFAULT, PETSC_IGNORE, PETSC_DETERMINE
526: M*/
527: #define PETSC_DECIDE -1
529: /*MC
530: PETSC_DETERMINE - standard way of passing in integer or floating point parameter
531: where you wish PETSc to compute the required value.
533: Level: beginner
535: Developer Note:
536: I would like to use const PetscInt PETSC_DETERMINE = PETSC_DECIDE; but for
537: some reason this is not allowed by the standard even though PETSC_DECIDE is a constant value.
539: .seealso: PETSC_DECIDE, PETSC_DEFAULT, PETSC_IGNORE, VecSetSizes()
541: M*/
542: #define PETSC_DETERMINE PETSC_DECIDE
544: /*MC
545: PETSC_DEFAULT - standard way of passing in integer or floating point parameter
546: where you wish PETSc to use the default.
548: Level: beginner
550: Fortran Notes:
551: You need to use PETSC_DEFAULT_INTEGER or PETSC_DEFAULT_REAL.
553: .seealso: PETSC_DECIDE, PETSC_IGNORE, PETSC_DETERMINE
555: M*/
556: #define PETSC_DEFAULT -2
558: /*MC
559: PETSC_COMM_WORLD - the equivalent of the MPI_COMM_WORLD communicator which represents
560: all the processs that PETSc knows about.
562: Level: beginner
564: Notes:
565: By default PETSC_COMM_WORLD and MPI_COMM_WORLD are identical unless you wish to
566: run PETSc on ONLY a subset of MPI_COMM_WORLD. In that case create your new (smaller)
567: communicator, call it, say comm, and set PETSC_COMM_WORLD = comm BEFORE calling
568: PetscInitialize(), but after MPI_Init() has been called.
570: The value of PETSC_COMM_WORLD should never be USED/accessed before PetscInitialize()
571: is called because it may not have a valid value yet.
573: .seealso: PETSC_COMM_SELF
575: M*/
576: PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;
578: /*MC
579: PETSC_COMM_SELF - This is always MPI_COMM_SELF
581: Level: beginner
583: Notes:
584: Do not USE/access or set this variable before PetscInitialize() has been called.
586: .seealso: PETSC_COMM_WORLD
588: M*/
589: #define PETSC_COMM_SELF MPI_COMM_SELF
591: PETSC_EXTERN PetscBool PetscBeganMPI;
592: PETSC_EXTERN PetscBool PetscInitializeCalled;
593: PETSC_EXTERN PetscBool PetscFinalizeCalled;
594: PETSC_EXTERN PetscBool PetscCUSPSynchronize;
595: PETSC_EXTERN PetscBool PetscViennaCLSynchronize;
596: PETSC_EXTERN PetscBool PetscCUDASynchronize;
598: PETSC_EXTERN PetscErrorCode PetscSetHelpVersionFunctions(PetscErrorCode (*)(MPI_Comm),PetscErrorCode (*)(MPI_Comm));
599: PETSC_EXTERN PetscErrorCode PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*);
600: PETSC_EXTERN PetscErrorCode PetscCommDestroy(MPI_Comm*);
602: /*MC
603: PetscMalloc - Allocates memory, One should use PetscNew(), PetscMalloc1() or PetscCalloc1() usually instead of this
605: Synopsis:
606: #include <petscsys.h>
607: PetscErrorCode PetscMalloc(size_t m,void **result)
609: Not Collective
611: Input Parameter:
612: . m - number of bytes to allocate
614: Output Parameter:
615: . result - memory allocated
617: Level: beginner
619: Notes:
620: Memory is always allocated at least double aligned
622: It is safe to allocate size 0 and pass the resulting pointer (which may or may not be NULL) to PetscFree().
624: .seealso: PetscFree(), PetscNew()
626: Concepts: memory allocation
628: M*/
629: #define PetscMalloc(a,b) ((*PetscTrMalloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b)))
631: /*MC
632: PetscRealloc - Rellocates memory
634: Synopsis:
635: #include <petscsys.h>
636: PetscErrorCode PetscRealloc(size_t m,void **result)
638: Not Collective
640: Input Parameters:
641: + m - number of bytes to allocate
642: - result - initial memory allocated
644: Output Parameter:
645: . result - new memory allocated
647: Level: developer
649: Notes:
650: Memory is always allocated at least double aligned
652: .seealso: PetscMalloc(), PetscFree(), PetscNew()
654: Concepts: memory allocation
656: M*/
657: #define PetscRealloc(a,b) ((*PetscTrRealloc)((a),__LINE__,PETSC_FUNCTION_NAME,__FILE__,(void**)(b)))
659: /*MC
660: PetscAddrAlign - Rounds up an address to PETSC_MEMALIGN alignment
662: Synopsis:
663: #include <petscsys.h>
664: void *PetscAddrAlign(void *addr)
666: Not Collective
668: Input Parameters:
669: . addr - address to align (any pointer type)
671: Level: developer
673: .seealso: PetscMallocAlign()
675: Concepts: memory allocation
676: M*/
677: #define PetscAddrAlign(a) (void*)((((PETSC_UINTPTR_T)(a))+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
679: /*MC
680: PetscMalloc1 - Allocates an array of memory aligned to PETSC_MEMALIGN
682: Synopsis:
683: #include <petscsys.h>
684: PetscErrorCode PetscMalloc1(size_t m1,type **r1)
686: Not Collective
688: Input Parameter:
689: . m1 - number of elements to allocate (may be zero)
691: Output Parameter:
692: . r1 - memory allocated in first chunk
694: Note:
695: This uses the sizeof() of the memory type requested to determine the total memory to be allocated, therefore you should not
696: multiply the number of elements requested by the sizeof() the type. For example use
697: $ PetscInt *id;
698: $ PetscMalloc1(10,&id);
699: not
700: $ PetscInt *id;
701: $ PetscMalloc1(10*sizeof(PetscInt),&id);
703: Does not zero the memory allocatd, used PetscCalloc1() to obtain memory that has been zeroed.
705: Level: beginner
707: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2()
709: Concepts: memory allocation
711: M*/
712: #define PetscMalloc1(m1,r1) PetscMalloc((m1)*sizeof(**(r1)),r1)
714: /*MC
715: PetscCalloc1 - Allocates a cleared (zeroed) array of memory aligned to PETSC_MEMALIGN
717: Synopsis:
718: #include <petscsys.h>
719: PetscErrorCode PetscCalloc1(size_t m1,type **r1)
721: Not Collective
723: Input Parameter:
724: . m1 - number of elements to allocate in 1st chunk (may be zero)
726: Output Parameter:
727: . r1 - memory allocated in first chunk
729: Notes:
730: See PetsMalloc1() for more details on usage.
732: Level: beginner
734: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2()
736: Concepts: memory allocation
738: M*/
739: #define PetscCalloc1(m1,r1) (PetscMalloc1((m1),r1) || PetscMemzero(*(r1),(m1)*sizeof(**(r1))))
741: /*MC
742: PetscMalloc2 - Allocates 2 arrays of memory both aligned to PETSC_MEMALIGN
744: Synopsis:
745: #include <petscsys.h>
746: PetscErrorCode PetscMalloc2(size_t m1,type **r1,size_t m2,type **r2)
748: Not Collective
750: Input Parameter:
751: + m1 - number of elements to allocate in 1st chunk (may be zero)
752: - m2 - number of elements to allocate in 2nd chunk (may be zero)
754: Output Parameter:
755: + r1 - memory allocated in first chunk
756: - r2 - memory allocated in second chunk
758: Level: developer
760: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc1(), PetscCalloc2()
762: Concepts: memory allocation
764: M*/
765: #if !defined(PETSC_USE_MALLOC_COALESCED)
766: #define PetscMalloc2(m1,r1,m2,r2) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)))
767: #else
768: #define PetscMalloc2(m1,r1,m2,r2) ((((m1)+(m2)) ? (*(r2) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(PETSC_MEMALIGN-1),r1)) : 0) \
769: || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),0) \
770: || (0==(m1) ? (*(r1) = 0,0) : 0) || (0==(m2) ? (*(r2) = 0,0) : 0))
771: #endif
773: /*MC
774: PetscCalloc2 - Allocates 2 cleared (zeroed) arrays of memory both aligned to PETSC_MEMALIGN
776: Synopsis:
777: #include <petscsys.h>
778: PetscErrorCode PetscCalloc2(size_t m1,type **r1,size_t m2,type **r2)
780: Not Collective
782: Input Parameter:
783: + m1 - number of elements to allocate in 1st chunk (may be zero)
784: - m2 - number of elements to allocate in 2nd chunk (may be zero)
786: Output Parameter:
787: + r1 - memory allocated in first chunk
788: - r2 - memory allocated in second chunk
790: Level: developer
792: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc1(), PetscMalloc2()
794: Concepts: memory allocation
795: M*/
796: #define PetscCalloc2(m1,r1,m2,r2) (PetscMalloc2((m1),(r1),(m2),(r2)) || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))))
798: /*MC
799: PetscMalloc3 - Allocates 3 arrays of memory, all aligned to PETSC_MEMALIGN
801: Synopsis:
802: #include <petscsys.h>
803: PetscErrorCode PetscMalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3)
805: Not Collective
807: Input Parameter:
808: + m1 - number of elements to allocate in 1st chunk (may be zero)
809: . m2 - number of elements to allocate in 2nd chunk (may be zero)
810: - m3 - number of elements to allocate in 3rd chunk (may be zero)
812: Output Parameter:
813: + r1 - memory allocated in first chunk
814: . r2 - memory allocated in second chunk
815: - r3 - memory allocated in third chunk
817: Level: developer
819: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc3(), PetscFree3()
821: Concepts: memory allocation
823: M*/
824: #if !defined(PETSC_USE_MALLOC_COALESCED)
825: #define PetscMalloc3(m1,r1,m2,r2,m3,r3) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)))
826: #else
827: #define PetscMalloc3(m1,r1,m2,r2,m3,r3) ((((m1)+(m2)+(m3)) ? (*(r2) = 0,*(r3) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+2*(PETSC_MEMALIGN-1),r1)) : 0) \
828: || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),0) \
829: || (0==(m1) ? (*(r1) = 0,0) : 0) || (0==(m2) ? (*(r2) = 0,0) : 0) || (0==(m3) ? (*(r3) = 0,0) : 0))
830: #endif
832: /*MC
833: PetscCalloc3 - Allocates 3 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
835: Synopsis:
836: #include <petscsys.h>
837: PetscErrorCode PetscCalloc3(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3)
839: Not Collective
841: Input Parameter:
842: + m1 - number of elements to allocate in 1st chunk (may be zero)
843: . m2 - number of elements to allocate in 2nd chunk (may be zero)
844: - m3 - number of elements to allocate in 3rd chunk (may be zero)
846: Output Parameter:
847: + r1 - memory allocated in first chunk
848: . r2 - memory allocated in second chunk
849: - r3 - memory allocated in third chunk
851: Level: developer
853: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscCalloc2(), PetscMalloc3(), PetscFree3()
855: Concepts: memory allocation
856: M*/
857: #define PetscCalloc3(m1,r1,m2,r2,m3,r3) \
858: (PetscMalloc3((m1),(r1),(m2),(r2),(m3),(r3)) \
859: || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))))
861: /*MC
862: PetscMalloc4 - Allocates 4 arrays of memory, all aligned to PETSC_MEMALIGN
864: Synopsis:
865: #include <petscsys.h>
866: PetscErrorCode PetscMalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4)
868: Not Collective
870: Input Parameter:
871: + m1 - number of elements to allocate in 1st chunk (may be zero)
872: . m2 - number of elements to allocate in 2nd chunk (may be zero)
873: . m3 - number of elements to allocate in 3rd chunk (may be zero)
874: - m4 - number of elements to allocate in 4th chunk (may be zero)
876: Output Parameter:
877: + r1 - memory allocated in first chunk
878: . r2 - memory allocated in second chunk
879: . r3 - memory allocated in third chunk
880: - r4 - memory allocated in fourth chunk
882: Level: developer
884: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4()
886: Concepts: memory allocation
888: M*/
889: #if !defined(PETSC_USE_MALLOC_COALESCED)
890: #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)))
891: #else
892: #define PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \
893: ((((m1)+(m2)+(m3)+(m4)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+3*(PETSC_MEMALIGN-1),r1)) : 0) \
894: || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),0) \
895: || (0==(m1) ? (*(r1) = 0,0) : 0) || (0==(m2) ? (*(r2) = 0,0) : 0) || (0==(m3) ? (*(r3) = 0,0) : 0) || (0==(m4) ? (*(r4) = 0,0) : 0))
896: #endif
898: /*MC
899: PetscCalloc4 - Allocates 4 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
901: Synopsis:
902: #include <petscsys.h>
903: PetscErrorCode PetscCalloc4(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4)
905: Not Collective
907: Input Parameters:
908: + m1 - number of elements to allocate in 1st chunk (may be zero)
909: . m2 - number of elements to allocate in 2nd chunk (may be zero)
910: . m3 - number of elements to allocate in 3rd chunk (may be zero)
911: - m4 - number of elements to allocate in 4th chunk (may be zero)
913: Output Parameters:
914: + r1 - memory allocated in first chunk
915: . r2 - memory allocated in second chunk
916: . r3 - memory allocated in third chunk
917: - r4 - memory allocated in fourth chunk
919: Level: developer
921: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc4(), PetscFree4()
923: Concepts: memory allocation
925: M*/
926: #define PetscCalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \
927: (PetscMalloc4(m1,r1,m2,r2,m3,r3,m4,r4) \
928: || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \
929: || PetscMemzero(*(r4),(m4)*sizeof(**(r4))))
931: /*MC
932: PetscMalloc5 - Allocates 5 arrays of memory, all aligned to PETSC_MEMALIGN
934: Synopsis:
935: #include <petscsys.h>
936: PetscErrorCode PetscMalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5)
938: Not Collective
940: Input Parameters:
941: + m1 - number of elements to allocate in 1st chunk (may be zero)
942: . m2 - number of elements to allocate in 2nd chunk (may be zero)
943: . m3 - number of elements to allocate in 3rd chunk (may be zero)
944: . m4 - number of elements to allocate in 4th chunk (may be zero)
945: - m5 - number of elements to allocate in 5th chunk (may be zero)
947: Output Parameters:
948: + r1 - memory allocated in first chunk
949: . r2 - memory allocated in second chunk
950: . r3 - memory allocated in third chunk
951: . r4 - memory allocated in fourth chunk
952: - r5 - memory allocated in fifth chunk
954: Level: developer
956: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc5(), PetscFree5()
958: Concepts: memory allocation
960: M*/
961: #if !defined(PETSC_USE_MALLOC_COALESCED)
962: #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)))
963: #else
964: #define PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \
965: ((((m1)+(m2)+(m3)+(m4)+(m5)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+4*(PETSC_MEMALIGN-1),r1)) : 0) \
966: || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),0) \
967: || (0==(m1) ? (*(r1) = 0,0) : 0) || (0==(m2) ? (*(r2) = 0,0) : 0) || (0==(m3) ? (*(r3) = 0,0) : 0) || (0==(m4) ? (*(r4) = 0,0) : 0) || (0==(m5) ? (*(r5) = 0,0) : 0))
968: #endif
970: /*MC
971: PetscCalloc5 - Allocates 5 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
973: Synopsis:
974: #include <petscsys.h>
975: PetscErrorCode PetscCalloc5(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5)
977: Not Collective
979: Input Parameters:
980: + m1 - number of elements to allocate in 1st chunk (may be zero)
981: . m2 - number of elements to allocate in 2nd chunk (may be zero)
982: . m3 - number of elements to allocate in 3rd chunk (may be zero)
983: . m4 - number of elements to allocate in 4th chunk (may be zero)
984: - m5 - number of elements to allocate in 5th chunk (may be zero)
986: Output Parameters:
987: + r1 - memory allocated in first chunk
988: . r2 - memory allocated in second chunk
989: . r3 - memory allocated in third chunk
990: . r4 - memory allocated in fourth chunk
991: - r5 - memory allocated in fifth chunk
993: Level: developer
995: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc5(), PetscFree5()
997: Concepts: memory allocation
999: M*/
1000: #define PetscCalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \
1001: (PetscMalloc5(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5) \
1002: || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \
1003: || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))))
1005: /*MC
1006: PetscMalloc6 - Allocates 6 arrays of memory, all aligned to PETSC_MEMALIGN
1008: Synopsis:
1009: #include <petscsys.h>
1010: PetscErrorCode PetscMalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6)
1012: Not Collective
1014: Input Parameters:
1015: + m1 - number of elements to allocate in 1st chunk (may be zero)
1016: . m2 - number of elements to allocate in 2nd chunk (may be zero)
1017: . m3 - number of elements to allocate in 3rd chunk (may be zero)
1018: . m4 - number of elements to allocate in 4th chunk (may be zero)
1019: . m5 - number of elements to allocate in 5th chunk (may be zero)
1020: - m6 - number of elements to allocate in 6th chunk (may be zero)
1022: Output Parameteasr:
1023: + r1 - memory allocated in first chunk
1024: . r2 - memory allocated in second chunk
1025: . r3 - memory allocated in third chunk
1026: . r4 - memory allocated in fourth chunk
1027: . r5 - memory allocated in fifth chunk
1028: - r6 - memory allocated in sixth chunk
1030: Level: developer
1032: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc6(), PetscFree3(), PetscFree4(), PetscFree5(), PetscFree6()
1034: Concepts: memory allocation
1036: M*/
1037: #if !defined(PETSC_USE_MALLOC_COALESCED)
1038: #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)) || PetscMalloc1((m6),(r6)))
1039: #else
1040: #define PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \
1041: ((((m1)+(m2)+(m3)+(m4)+(m5)+(m6)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+(m6)*sizeof(**(r6))+5*(PETSC_MEMALIGN-1),r1)) : 0) \
1042: || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),*(void**)(r6) = PetscAddrAlign(*(r5)+(m5)),0) \
1043: || (0==(m1) ? (*(r1) = 0,0) : 0) || (0==(m2) ? (*(r2) = 0,0) : 0) || (0==(m3) ? (*(r3) = 0,0) : 0) || (0==(m4) ? (*(r4) = 0,0) : 0) || (0==(m5) ? (*(r5) = 0,0) : 0) || (0==(m6) ? (*(r6) = 0,0) : 0))
1044: #endif
1046: /*MC
1047: PetscCalloc6 - Allocates 6 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
1049: Synopsis:
1050: #include <petscsys.h>
1051: PetscErrorCode PetscCalloc6(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6)
1053: Not Collective
1055: Input Parameters:
1056: + m1 - number of elements to allocate in 1st chunk (may be zero)
1057: . m2 - number of elements to allocate in 2nd chunk (may be zero)
1058: . m3 - number of elements to allocate in 3rd chunk (may be zero)
1059: . m4 - number of elements to allocate in 4th chunk (may be zero)
1060: . m5 - number of elements to allocate in 5th chunk (may be zero)
1061: - m6 - number of elements to allocate in 6th chunk (may be zero)
1063: Output Parameters:
1064: + r1 - memory allocated in first chunk
1065: . r2 - memory allocated in second chunk
1066: . r3 - memory allocated in third chunk
1067: . r4 - memory allocated in fourth chunk
1068: . r5 - memory allocated in fifth chunk
1069: - r6 - memory allocated in sixth chunk
1071: Level: developer
1073: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc6(), PetscFree6()
1075: Concepts: memory allocation
1076: M*/
1077: #define PetscCalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \
1078: (PetscMalloc6(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6) \
1079: || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \
1080: || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))) || PetscMemzero(*(r6),(m6)*sizeof(**(r6))))
1082: /*MC
1083: PetscMalloc7 - Allocates 7 arrays of memory, all aligned to PETSC_MEMALIGN
1085: Synopsis:
1086: #include <petscsys.h>
1087: PetscErrorCode PetscMalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7)
1089: Not Collective
1091: Input Parameters:
1092: + m1 - number of elements to allocate in 1st chunk (may be zero)
1093: . m2 - number of elements to allocate in 2nd chunk (may be zero)
1094: . m3 - number of elements to allocate in 3rd chunk (may be zero)
1095: . m4 - number of elements to allocate in 4th chunk (may be zero)
1096: . m5 - number of elements to allocate in 5th chunk (may be zero)
1097: . m6 - number of elements to allocate in 6th chunk (may be zero)
1098: - m7 - number of elements to allocate in 7th chunk (may be zero)
1100: Output Parameters:
1101: + r1 - memory allocated in first chunk
1102: . r2 - memory allocated in second chunk
1103: . r3 - memory allocated in third chunk
1104: . r4 - memory allocated in fourth chunk
1105: . r5 - memory allocated in fifth chunk
1106: . r6 - memory allocated in sixth chunk
1107: - r7 - memory allocated in seventh chunk
1109: Level: developer
1111: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscCalloc7(), PetscFree7()
1113: Concepts: memory allocation
1115: M*/
1116: #if !defined(PETSC_USE_MALLOC_COALESCED)
1117: #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) (PetscMalloc1((m1),(r1)) || PetscMalloc1((m2),(r2)) || PetscMalloc1((m3),(r3)) || PetscMalloc1((m4),(r4)) || PetscMalloc1((m5),(r5)) || PetscMalloc1((m6),(r6)) || PetscMalloc1((m7),(r7)))
1118: #else
1119: #define PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \
1120: ((((m1)+(m2)+(m3)+(m4)+(m5)+(m6)+(m7)) ? (*(r2) = 0, *(r3) = 0, *(r4) = 0,*(r5) = 0,*(r6) = 0,*(r7) = 0,PetscMalloc((m1)*sizeof(**(r1))+(m2)*sizeof(**(r2))+(m3)*sizeof(**(r3))+(m4)*sizeof(**(r4))+(m5)*sizeof(**(r5))+(m6)*sizeof(**(r6))+(m7)*sizeof(**(r7))+6*(PETSC_MEMALIGN-1),r1)) : 0) \
1121: || (*(void**)(r2) = PetscAddrAlign(*(r1)+(m1)),*(void**)(r3) = PetscAddrAlign(*(r2)+(m2)),*(void**)(r4) = PetscAddrAlign(*(r3)+(m3)),*(void**)(r5) = PetscAddrAlign(*(r4)+(m4)),*(void**)(r6) = PetscAddrAlign(*(r5)+(m5)),*(void**)(r7) = PetscAddrAlign(*(r6)+(m6)),0) \
1122: || (0==(m1) ? (*(r1) = 0,0) : 0) || (0==(m2) ? (*(r2) = 0,0) : 0) || (0==(m3) ? (*(r3) = 0,0) : 0) || (0==(m4) ? (*(r4) = 0,0) : 0) || (0==(m5) ? (*(r5) = 0,0) : 0) || (0==(m6) ? (*(r6) = 0,0) : 0) || (0==(m7) ? (*(r7) = 0,0) : 0))
1123: #endif
1125: /*MC
1126: PetscCalloc7 - Allocates 7 cleared (zeroed) arrays of memory, all aligned to PETSC_MEMALIGN
1128: Synopsis:
1129: #include <petscsys.h>
1130: PetscErrorCode PetscCalloc7(size_t m1,type **r1,size_t m2,type **r2,size_t m3,type **r3,size_t m4,type **r4,size_t m5,type **r5,size_t m6,type **r6,size_t m7,type **r7)
1132: Not Collective
1134: Input Parameters:
1135: + m1 - number of elements to allocate in 1st chunk (may be zero)
1136: . m2 - number of elements to allocate in 2nd chunk (may be zero)
1137: . m3 - number of elements to allocate in 3rd chunk (may be zero)
1138: . m4 - number of elements to allocate in 4th chunk (may be zero)
1139: . m5 - number of elements to allocate in 5th chunk (may be zero)
1140: . m6 - number of elements to allocate in 6th chunk (may be zero)
1141: - m7 - number of elements to allocate in 7th chunk (may be zero)
1143: Output Parameters:
1144: + r1 - memory allocated in first chunk
1145: . r2 - memory allocated in second chunk
1146: . r3 - memory allocated in third chunk
1147: . r4 - memory allocated in fourth chunk
1148: . r5 - memory allocated in fifth chunk
1149: . r6 - memory allocated in sixth chunk
1150: - r7 - memory allocated in seventh chunk
1152: Level: developer
1154: .seealso: PetscFree(), PetscNew(), PetscMalloc(), PetscMalloc2(), PetscMalloc7(), PetscFree7()
1156: Concepts: memory allocation
1157: M*/
1158: #define PetscCalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \
1159: (PetscMalloc7(m1,r1,m2,r2,m3,r3,m4,r4,m5,r5,m6,r6,m7,r7) \
1160: || PetscMemzero(*(r1),(m1)*sizeof(**(r1))) || PetscMemzero(*(r2),(m2)*sizeof(**(r2))) || PetscMemzero(*(r3),(m3)*sizeof(**(r3))) \
1161: || PetscMemzero(*(r4),(m4)*sizeof(**(r4))) || PetscMemzero(*(r5),(m5)*sizeof(**(r5))) || PetscMemzero(*(r6),(m6)*sizeof(**(r6))) \
1162: || PetscMemzero(*(r7),(m7)*sizeof(**(r7))))
1164: /*MC
1165: PetscNew - Allocates memory of a particular type, zeros the memory! Aligned to PETSC_MEMALIGN
1167: Synopsis:
1168: #include <petscsys.h>
1169: PetscErrorCode PetscNew(type **result)
1171: Not Collective
1173: Output Parameter:
1174: . result - memory allocated, sized to match pointer type
1176: Level: beginner
1178: .seealso: PetscFree(), PetscMalloc(), PetscNewLog(), PetscCalloc1(), PetscMalloc1()
1180: Concepts: memory allocation
1182: M*/
1183: #define PetscNew(b) PetscCalloc1(1,(b))
1185: /*MC
1186: PetscNewLog - Allocates memory of a type matching pointer, zeros the memory! Aligned to PETSC_MEMALIGN. Associates the memory allocated
1187: with the given object using PetscLogObjectMemory().
1189: Synopsis:
1190: #include <petscsys.h>
1191: PetscErrorCode PetscNewLog(PetscObject obj,type **result)
1193: Not Collective
1195: Input Parameter:
1196: . obj - object memory is logged to
1198: Output Parameter:
1199: . result - memory allocated, sized to match pointer type
1201: Level: developer
1203: .seealso: PetscFree(), PetscMalloc(), PetscNew(), PetscLogObjectMemory(), PetscCalloc1(), PetscMalloc1()
1205: Concepts: memory allocation
1207: M*/
1208: #define PetscNewLog(o,b) (PetscNew((b)) || PetscLogObjectMemory((PetscObject)o,sizeof(**(b))))
1210: /*MC
1211: PetscFree - Frees memory
1213: Synopsis:
1214: #include <petscsys.h>
1215: PetscErrorCode PetscFree(void *memory)
1217: Not Collective
1219: Input Parameter:
1220: . memory - memory to free (the pointer is ALWAYS set to NULL upon sucess)
1222: Level: beginner
1224: Notes:
1225: Do not free memory obtained with PetscMalloc2(), PetscCalloc2() etc, they must be freed with PetscFree2() etc.
1227: It is safe to call PetscFree() on a NULL pointer.
1229: .seealso: PetscNew(), PetscMalloc(), PetscNewLog(), PetscMalloc1(), PetscCalloc1()
1231: Concepts: memory allocation
1233: M*/
1234: #define PetscFree(a) ((*PetscTrFree)((void*)(a),__LINE__,PETSC_FUNCTION_NAME,__FILE__) || ((a) = 0,0))
1236: /*MC
1237: PetscFree2 - Frees 2 chunks of memory obtained with PetscMalloc2()
1239: Synopsis:
1240: #include <petscsys.h>
1241: PetscErrorCode PetscFree2(void *memory1,void *memory2)
1243: Not Collective
1245: Input Parameters:
1246: + memory1 - memory to free
1247: - memory2 - 2nd memory to free
1249: Level: developer
1251: Notes: Memory must have been obtained with PetscMalloc2()
1253: .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree()
1255: Concepts: memory allocation
1257: M*/
1258: #if !defined(PETSC_USE_MALLOC_COALESCED)
1259: #define PetscFree2(m1,m2) (PetscFree(m2) || PetscFree(m1))
1260: #else
1261: #define PetscFree2(m1,m2) ((m1) ? ((m2)=0,PetscFree(m1)) : ((m1)=0,PetscFree(m2)))
1262: #endif
1264: /*MC
1265: PetscFree3 - Frees 3 chunks of memory obtained with PetscMalloc3()
1267: Synopsis:
1268: #include <petscsys.h>
1269: PetscErrorCode PetscFree3(void *memory1,void *memory2,void *memory3)
1271: Not Collective
1273: Input Parameters:
1274: + memory1 - memory to free
1275: . memory2 - 2nd memory to free
1276: - memory3 - 3rd memory to free
1278: Level: developer
1280: Notes: Memory must have been obtained with PetscMalloc3()
1282: .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3()
1284: Concepts: memory allocation
1286: M*/
1287: #if !defined(PETSC_USE_MALLOC_COALESCED)
1288: #define PetscFree3(m1,m2,m3) (PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1289: #else
1290: #define PetscFree3(m1,m2,m3) ((m1) ? ((m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m3)=0,(m1)=0,PetscFree(m2)) : ((m2)=0,(m1)=0,PetscFree(m3))))
1291: #endif
1293: /*MC
1294: PetscFree4 - Frees 4 chunks of memory obtained with PetscMalloc4()
1296: Synopsis:
1297: #include <petscsys.h>
1298: PetscErrorCode PetscFree4(void *m1,void *m2,void *m3,void *m4)
1300: Not Collective
1302: Input Parameters:
1303: + m1 - memory to free
1304: . m2 - 2nd memory to free
1305: . m3 - 3rd memory to free
1306: - m4 - 4th memory to free
1308: Level: developer
1310: Notes: Memory must have been obtained with PetscMalloc4()
1312: .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4()
1314: Concepts: memory allocation
1316: M*/
1317: #if !defined(PETSC_USE_MALLOC_COALESCED)
1318: #define PetscFree4(m1,m2,m3,m4) (PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1319: #else
1320: #define PetscFree4(m1,m2,m3,m4) ((m1) ? ((m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : ((m3) ? ((m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m3)=0,(m2)=0,(m1)=0,PetscFree(m4)))))
1321: #endif
1323: /*MC
1324: PetscFree5 - Frees 5 chunks of memory obtained with PetscMalloc5()
1326: Synopsis:
1327: #include <petscsys.h>
1328: PetscErrorCode PetscFree5(void *m1,void *m2,void *m3,void *m4,void *m5)
1330: Not Collective
1332: Input Parameters:
1333: + m1 - memory to free
1334: . m2 - 2nd memory to free
1335: . m3 - 3rd memory to free
1336: . m4 - 4th memory to free
1337: - m5 - 5th memory to free
1339: Level: developer
1341: Notes: Memory must have been obtained with PetscMalloc5()
1343: .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5()
1345: Concepts: memory allocation
1347: M*/
1348: #if !defined(PETSC_USE_MALLOC_COALESCED)
1349: #define PetscFree5(m1,m2,m3,m4,m5) (PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1350: #else
1351: #define PetscFree5(m1,m2,m3,m4,m5) ((m1) ? ((m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : ((m3) ? ((m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : \
1352: ((m4) ? ((m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : ((m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5))))))
1353: #endif
1356: /*MC
1357: PetscFree6 - Frees 6 chunks of memory obtained with PetscMalloc6()
1359: Synopsis:
1360: #include <petscsys.h>
1361: PetscErrorCode PetscFree6(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6)
1363: Not Collective
1365: Input Parameters:
1366: + m1 - memory to free
1367: . m2 - 2nd memory to free
1368: . m3 - 3rd memory to free
1369: . m4 - 4th memory to free
1370: . m5 - 5th memory to free
1371: - m6 - 6th memory to free
1374: Level: developer
1376: Notes: Memory must have been obtained with PetscMalloc6()
1378: .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6()
1380: Concepts: memory allocation
1382: M*/
1383: #if !defined(PETSC_USE_MALLOC_COALESCED)
1384: #define PetscFree6(m1,m2,m3,m4,m5,m6) (PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1385: #else
1386: #define PetscFree6(m1,m2,m3,m4,m5,m6) ((m1) ? ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : \
1387: ((m3) ? ((m6)=0,(m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m4) ? ((m6)=0,(m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : \
1388: ((m5) ? ((m6)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)) : ((m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m6)))))))
1389: #endif
1391: /*MC
1392: PetscFree7 - Frees 7 chunks of memory obtained with PetscMalloc7()
1394: Synopsis:
1395: #include <petscsys.h>
1396: PetscErrorCode PetscFree7(void *m1,void *m2,void *m3,void *m4,void *m5,void *m6,void *m7)
1398: Not Collective
1400: Input Parameters:
1401: + m1 - memory to free
1402: . m2 - 2nd memory to free
1403: . m3 - 3rd memory to free
1404: . m4 - 4th memory to free
1405: . m5 - 5th memory to free
1406: . m6 - 6th memory to free
1407: - m7 - 7th memory to free
1410: Level: developer
1412: Notes: Memory must have been obtained with PetscMalloc7()
1414: .seealso: PetscNew(), PetscMalloc(), PetscMalloc2(), PetscFree(), PetscMalloc3(), PetscMalloc4(), PetscMalloc5(), PetscMalloc6(),
1415: PetscMalloc7()
1417: Concepts: memory allocation
1419: M*/
1420: #if !defined(PETSC_USE_MALLOC_COALESCED)
1421: #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) (PetscFree(m7) || PetscFree(m6) || PetscFree(m5) || PetscFree(m4) || PetscFree(m3) || PetscFree(m2) || PetscFree(m1))
1422: #else
1423: #define PetscFree7(m1,m2,m3,m4,m5,m6,m7) ((m1) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,PetscFree(m1)) : ((m2) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m3)=0,(m1)=0,PetscFree(m2)) : \
1424: ((m3) ? ((m7)=0,(m6)=0,(m5)=0,(m4)=0,(m2)=0,(m1)=0,PetscFree(m3)) : ((m4) ? ((m7)=0,(m6)=0,(m5)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m4)) : \
1425: ((m5) ? ((m7)=0,(m6)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m5)) : ((m6) ? ((m7)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m6)) : \
1426: ((m6)=0,(m5)=0,(m4)=0,(m3)=0,(m2)=0,(m1)=0,PetscFree(m7))))))))
1427: #endif
1429: PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**);
1430: PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]);
1431: PETSC_EXTERN PetscErrorCode (*PetscTrRealloc)(size_t,int,const char[],const char[],void**);
1432: PETSC_EXTERN PetscErrorCode PetscMallocSet(PetscErrorCode (*)(size_t,int,const char[],const char[],void**),PetscErrorCode (*)(void*,int,const char[],const char[]));
1433: PETSC_EXTERN PetscErrorCode PetscMallocClear(void);
1435: /*
1436: Unlike PetscMallocSet and PetscMallocClear which overwrite the existing settings, these two functions save the previous choice of allocator, and should be used in pair.
1437: */
1438: PETSC_EXTERN PetscErrorCode PetscMallocSetDRAM(void);
1439: PETSC_EXTERN PetscErrorCode PetscMallocResetDRAM(void);
1441: /*
1442: PetscLogDouble variables are used to contain double precision numbers
1443: that are not used in the numerical computations, but rather in logging,
1444: timing etc.
1445: */
1446: typedef double PetscLogDouble;
1447: #define MPIU_PETSCLOGDOUBLE MPI_DOUBLE
1449: /*
1450: Routines for tracing memory corruption/bleeding with default PETSc memory allocation
1451: */
1452: PETSC_EXTERN PetscErrorCode PetscMallocDump(FILE *);
1453: PETSC_EXTERN PetscErrorCode PetscMallocDumpLog(FILE *);
1454: PETSC_EXTERN PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *);
1455: PETSC_EXTERN PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *);
1456: PETSC_EXTERN PetscErrorCode PetscMallocDebug(PetscBool);
1457: PETSC_EXTERN PetscErrorCode PetscMallocGetDebug(PetscBool*);
1458: PETSC_EXTERN PetscErrorCode PetscMallocValidate(int,const char[],const char[]);
1459: PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLog(void);
1460: PETSC_EXTERN PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble);
1461: PETSC_EXTERN PetscErrorCode PetscMallocGetDumpLog(PetscBool*);
1463: /*E
1464: PetscDataType - Used for handling different basic data types.
1466: Level: beginner
1468: Developer comment:
1469: It would be nice if we could always just use MPI Datatypes, why can we not?
1471: .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscDataTypeToMPIDataType(),
1472: PetscDataTypeGetSize()
1474: E*/
1475: typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,
1476: PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12, PETSC_STRING = 13, PETSC___FP16 = 14,PETSC_STRUCT, PETSC_DATATYPE_UNKNOWN} PetscDataType;
1477: PETSC_EXTERN const char *const PetscDataTypes[];
1479: #if defined(PETSC_USE_COMPLEX)
1480: #define PETSC_SCALAR PETSC_COMPLEX
1481: #else
1482: #if defined(PETSC_USE_REAL_SINGLE)
1483: #define PETSC_SCALAR PETSC_FLOAT
1484: #elif defined(PETSC_USE_REAL___FLOAT128)
1485: #define PETSC_SCALAR PETSC___FLOAT128
1486: #elif defined(PETSC_USE_REAL___FP16)
1487: #define PETSC_SCALAR PETSC___FP16
1488: #else
1489: #define PETSC_SCALAR PETSC_DOUBLE
1490: #endif
1491: #endif
1492: #if defined(PETSC_USE_REAL_SINGLE)
1493: #define PETSC_REAL PETSC_FLOAT
1494: #elif defined(PETSC_USE_REAL___FLOAT128)
1495: #define PETSC_REAL PETSC___FLOAT128
1496: #elif defined(PETSC_USE_REAL___FP16)
1497: #define PETSC_REAL PETSC___FP16
1498: #else
1499: #define PETSC_REAL PETSC_DOUBLE
1500: #endif
1501: #define PETSC_FORTRANADDR PETSC_LONG
1503: PETSC_EXTERN PetscErrorCode PetscDataTypeToMPIDataType(PetscDataType,MPI_Datatype*);
1504: PETSC_EXTERN PetscErrorCode PetscMPIDataTypeToPetscDataType(MPI_Datatype,PetscDataType*);
1505: PETSC_EXTERN PetscErrorCode PetscDataTypeGetSize(PetscDataType,size_t*);
1506: PETSC_EXTERN PetscErrorCode PetscDataTypeFromString(const char*,PetscDataType*,PetscBool*);
1508: /*
1509: Basic memory and string operations. These are usually simple wrappers
1510: around the basic Unix system calls, but a few of them have additional
1511: functionality and/or error checking.
1512: */
1513: PETSC_EXTERN PetscErrorCode PetscBitMemcpy(void*,PetscInt,const void*,PetscInt,PetscInt,PetscDataType);
1514: PETSC_EXTERN PetscErrorCode PetscMemmove(void*,void *,size_t);
1515: PETSC_EXTERN PetscErrorCode PetscMemcmp(const void*,const void*,size_t,PetscBool *);
1516: PETSC_EXTERN PetscErrorCode PetscStrlen(const char[],size_t*);
1517: PETSC_EXTERN PetscErrorCode PetscStrToArray(const char[],char,int*,char ***);
1518: PETSC_EXTERN PetscErrorCode PetscStrToArrayDestroy(int,char **);
1519: PETSC_EXTERN PetscErrorCode PetscStrcmp(const char[],const char[],PetscBool *);
1520: PETSC_EXTERN PetscErrorCode PetscStrgrt(const char[],const char[],PetscBool *);
1521: PETSC_EXTERN PetscErrorCode PetscStrcasecmp(const char[],const char[],PetscBool *);
1522: PETSC_EXTERN PetscErrorCode PetscStrncmp(const char[],const char[],size_t,PetscBool *);
1523: PETSC_EXTERN PetscErrorCode PetscStrcpy(char[],const char[]);
1524: PETSC_EXTERN PetscErrorCode PetscStrcat(char[],const char[]);
1525: PETSC_EXTERN PetscErrorCode PetscStrncat(char[],const char[],size_t);
1526: PETSC_EXTERN PetscErrorCode PetscStrncpy(char[],const char[],size_t);
1527: PETSC_EXTERN PetscErrorCode PetscStrchr(const char[],char,char *[]);
1528: PETSC_EXTERN PetscErrorCode PetscStrtolower(char[]);
1529: PETSC_EXTERN PetscErrorCode PetscStrtoupper(char[]);
1530: PETSC_EXTERN PetscErrorCode PetscStrrchr(const char[],char,char *[]);
1531: PETSC_EXTERN PetscErrorCode PetscStrstr(const char[],const char[],char *[]);
1532: PETSC_EXTERN PetscErrorCode PetscStrrstr(const char[],const char[],char *[]);
1533: PETSC_EXTERN PetscErrorCode PetscStrendswith(const char[],const char[],PetscBool*);
1534: PETSC_EXTERN PetscErrorCode PetscStrbeginswith(const char[],const char[],PetscBool*);
1535: PETSC_EXTERN PetscErrorCode PetscStrendswithwhich(const char[],const char *const*,PetscInt*);
1536: PETSC_EXTERN PetscErrorCode PetscStrallocpy(const char[],char *[]);
1537: PETSC_EXTERN PetscErrorCode PetscStrArrayallocpy(const char *const*,char***);
1538: PETSC_EXTERN PetscErrorCode PetscStrArrayDestroy(char***);
1539: PETSC_EXTERN PetscErrorCode PetscStrNArrayallocpy(PetscInt,const char *const*,char***);
1540: PETSC_EXTERN PetscErrorCode PetscStrNArrayDestroy(PetscInt,char***);
1541: PETSC_EXTERN PetscErrorCode PetscStrreplace(MPI_Comm,const char[],char[],size_t);
1543: PETSC_EXTERN void PetscStrcmpNoError(const char[],const char[],PetscBool *);
1545: /*S
1546: PetscToken - 'Token' used for managing tokenizing strings
1548: Level: intermediate
1550: .seealso: PetscTokenCreate(), PetscTokenFind(), PetscTokenDestroy()
1551: S*/
1552: typedef struct _p_PetscToken* PetscToken;
1554: PETSC_EXTERN PetscErrorCode PetscTokenCreate(const char[],const char,PetscToken*);
1555: PETSC_EXTERN PetscErrorCode PetscTokenFind(PetscToken,char *[]);
1556: PETSC_EXTERN PetscErrorCode PetscTokenDestroy(PetscToken*);
1558: PETSC_EXTERN PetscErrorCode PetscEListFind(PetscInt,const char *const*,const char*,PetscInt*,PetscBool*);
1559: PETSC_EXTERN PetscErrorCode PetscEnumFind(const char *const*,const char*,PetscEnum*,PetscBool*);
1561: /*
1562: These are MPI operations for MPI_Allreduce() etc
1563: */
1564: PETSC_EXTERN MPI_Op MPIU_MAXSUM_OP;
1565: #if (defined(PETSC_HAVE_COMPLEX) && !defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)) || defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
1566: PETSC_EXTERN MPI_Op MPIU_SUM;
1567: #else
1568: #define MPIU_SUM MPI_SUM
1569: #endif
1570: #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
1571: PETSC_EXTERN MPI_Op MPIU_MAX;
1572: PETSC_EXTERN MPI_Op MPIU_MIN;
1573: #else
1574: #define MPIU_MAX MPI_MAX
1575: #define MPIU_MIN MPI_MIN
1576: #endif
1577: PETSC_EXTERN PetscErrorCode PetscMaxSum(MPI_Comm,const PetscInt[],PetscInt*,PetscInt*);
1579: PETSC_EXTERN PetscErrorCode MPIULong_Send(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1580: PETSC_EXTERN PetscErrorCode MPIULong_Recv(void*,PetscInt,MPI_Datatype,PetscMPIInt,PetscMPIInt,MPI_Comm);
1582: /*S
1583: PetscObject - any PETSc object, PetscViewer, Mat, Vec, KSP etc
1585: Level: beginner
1587: Note:
1588: This is the base class from which all PETSc objects are derived from.
1590: .seealso: PetscObjectDestroy(), PetscObjectView(), PetscObjectGetName(), PetscObjectSetName(), PetscObjectReference(), PetscObjectDereference()
1591: S*/
1592: typedef struct _p_PetscObject* PetscObject;
1594: /*MC
1595: PetscObjectId - unique integer Id for a PetscObject
1597: Level: developer
1599: Notes:
1600: Unlike pointer values, object ids are never reused.
1602: .seealso: PetscObjectState, PetscObjectGetId()
1603: M*/
1604: #if defined(PETSC_USING_F90) && !defined(PETSC_USE_FORTRANKIND) /* compaq F90 */
1605: typedef int PetscObjectId;
1606: #else
1607: typedef PetscInt64 PetscObjectId;
1608: #endif
1610: /*MC
1611: PetscObjectState - integer state for a PetscObject
1613: Level: developer
1615: Notes:
1616: Object state is always-increasing and (for objects that track state) can be used to determine if an object has
1617: changed since the last time you interacted with it. It is 64-bit so that it will not overflow for a very long time.
1619: .seealso: PetscObjectId, PetscObjectStateGet(), PetscObjectStateIncrease(), PetscObjectStateSet()
1620: M*/
1621: #if defined(PETSC_USING_F90) && !defined(PETSC_USE_FORTRANKIND) /* compaq F90 */
1622: typedef int PetscObjectState;
1623: #else
1624: typedef PetscInt64 PetscObjectState;
1625: #endif
1627: /*S
1628: PetscFunctionList - Linked list of functions, possibly stored in dynamic libraries, accessed
1629: by string name
1631: Level: advanced
1633: .seealso: PetscFunctionListAdd(), PetscFunctionListDestroy(), PetscOpFlist
1634: S*/
1635: typedef struct _n_PetscFunctionList *PetscFunctionList;
1637: /*E
1638: PetscFileMode - Access mode for a file.
1640: Level: beginner
1642: $ FILE_MODE_READ - open a file at its beginning for reading
1643: $ FILE_MODE_WRITE - open a file at its beginning for writing (will create if the file does not exist)
1644: $ FILE_MODE_APPEND - open a file at end for writing
1645: $ FILE_MODE_UPDATE - open a file for updating, meaning for reading and writing
1646: $ FILE_MODE_APPEND_UPDATE - open a file for updating, meaning for reading and writing, at the end
1648: .seealso: PetscViewerFileSetMode()
1649: E*/
1650: typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;
1651: extern const char *const PetscFileModes[];
1653: /*
1654: Defines PETSc error handling.
1655: */
1656: #include <petscerror.h>
1658: #define PETSC_SMALLEST_CLASSID 1211211
1659: PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;
1660: PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;
1661: PETSC_EXTERN PetscErrorCode PetscClassIdRegister(const char[],PetscClassId *);
1663: /*
1664: Routines that get memory usage information from the OS
1665: */
1666: PETSC_EXTERN PetscErrorCode PetscMemoryGetCurrentUsage(PetscLogDouble *);
1667: PETSC_EXTERN PetscErrorCode PetscMemoryGetMaximumUsage(PetscLogDouble *);
1668: PETSC_EXTERN PetscErrorCode PetscMemorySetGetMaximumUsage(void);
1669: PETSC_EXTERN PetscErrorCode PetscMemoryTrace(const char[]);
1671: PETSC_EXTERN PetscErrorCode PetscInfoAllow(PetscBool ,const char []);
1672: PETSC_EXTERN PetscErrorCode PetscSleep(PetscReal);
1674: /*
1675: Initialization of PETSc
1676: */
1677: PETSC_EXTERN PetscErrorCode PetscInitialize(int*,char***,const char[],const char[]);
1678: PETSC_EXTERN PetscErrorCode PetscInitializeNoPointers(int,char**,const char[],const char[]);
1679: PETSC_EXTERN PetscErrorCode PetscInitializeNoArguments(void);
1680: PETSC_EXTERN PetscErrorCode PetscInitialized(PetscBool *);
1681: PETSC_EXTERN PetscErrorCode PetscFinalized(PetscBool *);
1682: PETSC_EXTERN PetscErrorCode PetscFinalize(void);
1683: PETSC_EXTERN PetscErrorCode PetscInitializeFortran(void);
1684: PETSC_EXTERN PetscErrorCode PetscGetArgs(int*,char ***);
1685: PETSC_EXTERN PetscErrorCode PetscGetArguments(char ***);
1686: PETSC_EXTERN PetscErrorCode PetscFreeArguments(char **);
1688: PETSC_EXTERN PetscErrorCode PetscEnd(void);
1689: PETSC_EXTERN PetscErrorCode PetscSysInitializePackage(void);
1691: PETSC_EXTERN PetscErrorCode PetscPythonInitialize(const char[],const char[]);
1692: PETSC_EXTERN PetscErrorCode PetscPythonFinalize(void);
1693: PETSC_EXTERN PetscErrorCode PetscPythonPrintError(void);
1694: PETSC_EXTERN PetscErrorCode PetscPythonMonitorSet(PetscObject,const char[]);
1696: /*
1697: These are so that in extern C code we can caste function pointers to non-extern C
1698: function pointers. Since the regular C++ code expects its function pointers to be C++
1699: */
1700: PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);
1701: PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);
1702: PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);
1704: /*
1705: Functions that can act on any PETSc object.
1706: */
1707: PETSC_EXTERN PetscErrorCode PetscObjectDestroy(PetscObject*);
1708: PETSC_EXTERN PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm *);
1709: PETSC_EXTERN PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId *);
1710: PETSC_EXTERN PetscErrorCode PetscObjectGetClassName(PetscObject,const char *[]);
1711: PETSC_EXTERN PetscErrorCode PetscObjectSetType(PetscObject,const char []);
1712: PETSC_EXTERN PetscErrorCode PetscObjectGetType(PetscObject,const char *[]);
1713: PETSC_EXTERN PetscErrorCode PetscObjectSetName(PetscObject,const char[]);
1714: PETSC_EXTERN PetscErrorCode PetscObjectGetName(PetscObject,const char*[]);
1715: PETSC_EXTERN PetscErrorCode PetscObjectSetTabLevel(PetscObject,PetscInt);
1716: PETSC_EXTERN PetscErrorCode PetscObjectGetTabLevel(PetscObject,PetscInt*);
1717: PETSC_EXTERN PetscErrorCode PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt);
1718: PETSC_EXTERN PetscErrorCode PetscObjectReference(PetscObject);
1719: PETSC_EXTERN PetscErrorCode PetscObjectGetReference(PetscObject,PetscInt*);
1720: PETSC_EXTERN PetscErrorCode PetscObjectDereference(PetscObject);
1721: PETSC_EXTERN PetscErrorCode PetscObjectGetNewTag(PetscObject,PetscMPIInt *);
1722: PETSC_EXTERN PetscErrorCode PetscObjectCompose(PetscObject,const char[],PetscObject);
1723: PETSC_EXTERN PetscErrorCode PetscObjectRemoveReference(PetscObject,const char[]);
1724: PETSC_EXTERN PetscErrorCode PetscObjectQuery(PetscObject,const char[],PetscObject *);
1725: PETSC_EXTERN PetscErrorCode PetscObjectComposeFunction_Private(PetscObject,const char[],void (*)(void));
1726: #define PetscObjectComposeFunction(a,b,d) PetscObjectComposeFunction_Private(a,b,(PetscVoidFunction)(d))
1727: PETSC_EXTERN PetscErrorCode PetscObjectSetFromOptions(PetscObject);
1728: PETSC_EXTERN PetscErrorCode PetscObjectSetUp(PetscObject);
1729: PETSC_EXTERN PetscErrorCode PetscObjectSetPrintedOptions(PetscObject);
1730: PETSC_EXTERN PetscErrorCode PetscObjectInheritPrintedOptions(PetscObject,PetscObject);
1731: PETSC_EXTERN PetscErrorCode PetscCommGetNewTag(MPI_Comm,PetscMPIInt *);
1733: #include <petscviewertypes.h>
1734: #include <petscoptions.h>
1736: PETSC_EXTERN PetscErrorCode PetscObjectsListGetGlobalNumbering(MPI_Comm,PetscInt,PetscObject*,PetscInt*,PetscInt*);
1738: PETSC_EXTERN PetscErrorCode PetscMemoryShowUsage(PetscViewer,const char[]);
1739: PETSC_EXTERN PetscErrorCode PetscMemoryView(PetscViewer,const char[]);
1740: PETSC_EXTERN PetscErrorCode PetscObjectPrintClassNamePrefixType(PetscObject,PetscViewer);
1741: PETSC_EXTERN PetscErrorCode PetscObjectView(PetscObject,PetscViewer);
1742: #define PetscObjectQueryFunction(obj,name,fptr) PetscObjectQueryFunction_Private((obj),(name),(PetscVoidFunction*)(fptr))
1743: PETSC_EXTERN PetscErrorCode PetscObjectQueryFunction_Private(PetscObject,const char[],void (**)(void));
1744: PETSC_EXTERN PetscErrorCode PetscObjectSetOptionsPrefix(PetscObject,const char[]);
1745: PETSC_EXTERN PetscErrorCode PetscObjectAppendOptionsPrefix(PetscObject,const char[]);
1746: PETSC_EXTERN PetscErrorCode PetscObjectPrependOptionsPrefix(PetscObject,const char[]);
1747: PETSC_EXTERN PetscErrorCode PetscObjectGetOptionsPrefix(PetscObject,const char*[]);
1748: PETSC_EXTERN PetscErrorCode PetscObjectChangeTypeName(PetscObject,const char[]);
1749: PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroy(PetscObject);
1750: PETSC_EXTERN PetscErrorCode PetscObjectRegisterDestroyAll(void);
1751: PETSC_EXTERN PetscErrorCode PetscObjectViewFromOptions(PetscObject,PetscObject,const char[]);
1752: PETSC_EXTERN PetscErrorCode PetscObjectName(PetscObject);
1753: PETSC_EXTERN PetscErrorCode PetscObjectTypeCompare(PetscObject,const char[],PetscBool *);
1754: PETSC_EXTERN PetscErrorCode PetscObjectBaseTypeCompare(PetscObject,const char[],PetscBool *);
1755: PETSC_EXTERN PetscErrorCode PetscObjectTypeCompareAny(PetscObject,PetscBool*,const char[],...);
1756: PETSC_EXTERN PetscErrorCode PetscRegisterFinalize(PetscErrorCode (*)(void));
1757: PETSC_EXTERN PetscErrorCode PetscRegisterFinalizeAll(void);
1759: #if defined(PETSC_HAVE_SAWS)
1760: PETSC_EXTERN PetscErrorCode PetscSAWsBlock(void);
1761: PETSC_EXTERN PetscErrorCode PetscObjectSAWsViewOff(PetscObject);
1762: PETSC_EXTERN PetscErrorCode PetscObjectSAWsSetBlock(PetscObject,PetscBool);
1763: PETSC_EXTERN PetscErrorCode PetscObjectSAWsBlock(PetscObject);
1764: PETSC_EXTERN PetscErrorCode PetscObjectSAWsGrantAccess(PetscObject);
1765: PETSC_EXTERN PetscErrorCode PetscObjectSAWsTakeAccess(PetscObject);
1766: PETSC_EXTERN void PetscStackSAWsGrantAccess(void);
1767: PETSC_EXTERN void PetscStackSAWsTakeAccess(void);
1768: PETSC_EXTERN PetscErrorCode PetscStackViewSAWs(void);
1769: PETSC_EXTERN PetscErrorCode PetscStackSAWsViewOff(void);
1771: #else
1772: #define PetscSAWsBlock() 0
1773: #define PetscObjectSAWsViewOff(obj) 0
1774: #define PetscObjectSAWsSetBlock(obj,flg) 0
1775: #define PetscObjectSAWsBlock(obj) 0
1776: #define PetscObjectSAWsGrantAccess(obj) 0
1777: #define PetscObjectSAWsTakeAccess(obj) 0
1778: #define PetscStackViewSAWs() 0
1779: #define PetscStackSAWsViewOff() 0
1780: #define PetscStackSAWsTakeAccess()
1781: #define PetscStackSAWsGrantAccess()
1783: #endif
1785: typedef void* PetscDLHandle;
1786: typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;
1787: PETSC_EXTERN PetscErrorCode PetscDLOpen(const char[],PetscDLMode,PetscDLHandle *);
1788: PETSC_EXTERN PetscErrorCode PetscDLClose(PetscDLHandle *);
1789: PETSC_EXTERN PetscErrorCode PetscDLSym(PetscDLHandle,const char[],void **);
1791: #if defined(PETSC_USE_DEBUG)
1792: PETSC_EXTERN PetscErrorCode PetscMallocGetStack(void*,PetscStack**);
1793: #endif
1794: PETSC_EXTERN PetscErrorCode PetscObjectsDump(FILE*,PetscBool);
1796: /*S
1797: PetscObjectList - Linked list of PETSc objects, each accessable by string name
1799: Level: developer
1801: Notes:
1802: Used by PetscObjectCompose() and PetscObjectQuery()
1804: .seealso: PetscObjectListAdd(), PetscObjectListDestroy(), PetscObjectListFind(), PetscObjectCompose(), PetscObjectQuery(), PetscFunctionList
1805: S*/
1806: typedef struct _n_PetscObjectList *PetscObjectList;
1808: PETSC_EXTERN PetscErrorCode PetscObjectListDestroy(PetscObjectList*);
1809: PETSC_EXTERN PetscErrorCode PetscObjectListFind(PetscObjectList,const char[],PetscObject*);
1810: PETSC_EXTERN PetscErrorCode PetscObjectListReverseFind(PetscObjectList,PetscObject,char**,PetscBool*);
1811: PETSC_EXTERN PetscErrorCode PetscObjectListAdd(PetscObjectList *,const char[],PetscObject);
1812: PETSC_EXTERN PetscErrorCode PetscObjectListRemoveReference(PetscObjectList *,const char[]);
1813: PETSC_EXTERN PetscErrorCode PetscObjectListDuplicate(PetscObjectList,PetscObjectList *);
1815: /*
1816: Dynamic library lists. Lists of names of routines in objects or in dynamic
1817: link libraries that will be loaded as needed.
1818: */
1820: #define PetscFunctionListAdd(list,name,fptr) PetscFunctionListAdd_Private((list),(name),(PetscVoidFunction)(fptr))
1821: PETSC_EXTERN PetscErrorCode PetscFunctionListAdd_Private(PetscFunctionList*,const char[],void (*)(void));
1822: PETSC_EXTERN PetscErrorCode PetscFunctionListDestroy(PetscFunctionList*);
1823: #define PetscFunctionListFind(list,name,fptr) PetscFunctionListFind_Private((list),(name),(PetscVoidFunction*)(fptr))
1824: PETSC_EXTERN PetscErrorCode PetscFunctionListFind_Private(PetscFunctionList,const char[],void (**)(void));
1825: PETSC_EXTERN PetscErrorCode PetscFunctionListPrintTypes(MPI_Comm,FILE*,const char[],const char[],const char[],const char[],PetscFunctionList,const char[]);
1826: PETSC_EXTERN PetscErrorCode PetscFunctionListDuplicate(PetscFunctionList,PetscFunctionList *);
1827: PETSC_EXTERN PetscErrorCode PetscFunctionListView(PetscFunctionList,PetscViewer);
1828: PETSC_EXTERN PetscErrorCode PetscFunctionListGet(PetscFunctionList,const char ***,int*);
1830: /*S
1831: PetscDLLibrary - Linked list of dynamics libraries to search for functions
1833: Level: advanced
1835: .seealso: PetscDLLibraryOpen()
1836: S*/
1837: typedef struct _n_PetscDLLibrary *PetscDLLibrary;
1838: PETSC_EXTERN PetscDLLibrary PetscDLLibrariesLoaded;
1839: PETSC_EXTERN PetscErrorCode PetscDLLibraryAppend(MPI_Comm,PetscDLLibrary *,const char[]);
1840: PETSC_EXTERN PetscErrorCode PetscDLLibraryPrepend(MPI_Comm,PetscDLLibrary *,const char[]);
1841: PETSC_EXTERN PetscErrorCode PetscDLLibrarySym(MPI_Comm,PetscDLLibrary *,const char[],const char[],void **);
1842: PETSC_EXTERN PetscErrorCode PetscDLLibraryPrintPath(PetscDLLibrary);
1843: PETSC_EXTERN PetscErrorCode PetscDLLibraryRetrieve(MPI_Comm,const char[],char *,size_t,PetscBool *);
1844: PETSC_EXTERN PetscErrorCode PetscDLLibraryOpen(MPI_Comm,const char[],PetscDLLibrary *);
1845: PETSC_EXTERN PetscErrorCode PetscDLLibraryClose(PetscDLLibrary);
1847: /*
1848: Useful utility routines
1849: */
1850: PETSC_EXTERN PetscErrorCode PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*);
1851: PETSC_EXTERN PetscErrorCode PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*);
1852: PETSC_EXTERN PetscErrorCode PetscSequentialPhaseBegin(MPI_Comm,PetscMPIInt);
1853: PETSC_EXTERN PetscErrorCode PetscSequentialPhaseEnd(MPI_Comm,PetscMPIInt);
1854: PETSC_EXTERN PetscErrorCode PetscBarrier(PetscObject);
1855: PETSC_EXTERN PetscErrorCode PetscMPIDump(FILE*);
1857: /*
1858: PetscNot - negates a logical type value and returns result as a PetscBool
1860: Notes:
1861: This is useful in cases like
1862: $ int *a;
1863: $ PetscBool flag = PetscNot(a)
1864: where !a would not return a PetscBool because we cannot provide a cast from int to PetscBool in C.
1865: */
1866: #define PetscNot(a) ((a) ? PETSC_FALSE : PETSC_TRUE)
1868: /*MC
1869: PetscHelpPrintf - Prints help messages.
1871: Synopsis:
1872: #include <petscsys.h>
1873: PetscErrorCode (*PetscHelpPrintf)(const char format[],...);
1875: Not Collective
1877: Input Parameters:
1878: . format - the usual printf() format string
1880: Level: developer
1882: Fortran Note:
1883: This routine is not supported in Fortran.
1885: Concepts: help messages^printing
1886: Concepts: printing^help messages
1888: .seealso: PetscFPrintf(), PetscSynchronizedPrintf(), PetscErrorPrintf()
1889: M*/
1890: PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);
1892: /*
1893: Defines PETSc profiling.
1894: */
1895: #include <petsclog.h>
1897: /*
1898: Simple PETSc parallel IO for ASCII printing
1899: */
1900: PETSC_EXTERN PetscErrorCode PetscFixFilename(const char[],char[]);
1901: PETSC_EXTERN PetscErrorCode PetscFOpen(MPI_Comm,const char[],const char[],FILE**);
1902: PETSC_EXTERN PetscErrorCode PetscFClose(MPI_Comm,FILE*);
1903: PETSC_EXTERN PetscErrorCode PetscFPrintf(MPI_Comm,FILE*,const char[],...);
1904: PETSC_EXTERN PetscErrorCode PetscPrintf(MPI_Comm,const char[],...);
1905: PETSC_EXTERN PetscErrorCode PetscSNPrintf(char*,size_t,const char [],...);
1906: PETSC_EXTERN PetscErrorCode PetscSNPrintfCount(char*,size_t,const char [],size_t*,...);
1908: PETSC_EXTERN PetscErrorCode PetscErrorPrintfDefault(const char [],...);
1909: PETSC_EXTERN PetscErrorCode PetscErrorPrintfNone(const char [],...);
1910: PETSC_EXTERN PetscErrorCode PetscHelpPrintfDefault(MPI_Comm,const char [],...);
1912: #if defined(PETSC_HAVE_POPEN)
1913: PETSC_EXTERN PetscErrorCode PetscPOpen(MPI_Comm,const char[],const char[],const char[],FILE **);
1914: PETSC_EXTERN PetscErrorCode PetscPClose(MPI_Comm,FILE*,int*);
1915: PETSC_EXTERN PetscErrorCode PetscPOpenSetMachine(const char[]);
1916: #endif
1918: PETSC_EXTERN PetscErrorCode PetscSynchronizedPrintf(MPI_Comm,const char[],...);
1919: PETSC_EXTERN PetscErrorCode PetscSynchronizedFPrintf(MPI_Comm,FILE*,const char[],...);
1920: PETSC_EXTERN PetscErrorCode PetscSynchronizedFlush(MPI_Comm,FILE*);
1921: PETSC_EXTERN PetscErrorCode PetscSynchronizedFGets(MPI_Comm,FILE*,size_t,char[]);
1922: PETSC_EXTERN PetscErrorCode PetscStartMatlab(MPI_Comm,const char[],const char[],FILE**);
1923: PETSC_EXTERN PetscErrorCode PetscStartJava(MPI_Comm,const char[],const char[],FILE**);
1924: PETSC_EXTERN PetscErrorCode PetscGetPetscDir(const char*[]);
1926: PETSC_EXTERN PetscErrorCode PetscPopUpSelect(MPI_Comm,const char*,const char*,int,const char**,int*);
1928: /*S
1929: PetscContainer - Simple PETSc object that contains a pointer to any required data
1931: Level: advanced
1933: .seealso: PetscObject, PetscContainerCreate()
1934: S*/
1935: PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;
1936: typedef struct _p_PetscContainer* PetscContainer;
1937: PETSC_EXTERN PetscErrorCode PetscContainerGetPointer(PetscContainer,void **);
1938: PETSC_EXTERN PetscErrorCode PetscContainerSetPointer(PetscContainer,void *);
1939: PETSC_EXTERN PetscErrorCode PetscContainerDestroy(PetscContainer*);
1940: PETSC_EXTERN PetscErrorCode PetscContainerCreate(MPI_Comm,PetscContainer *);
1941: PETSC_EXTERN PetscErrorCode PetscContainerSetUserDestroy(PetscContainer, PetscErrorCode (*)(void*));
1942: PETSC_EXTERN PetscErrorCode PetscContainerUserDestroyDefault(void*);
1944: /*
1945: For use in debuggers
1946: */
1947: PETSC_EXTERN PetscMPIInt PetscGlobalRank;
1948: PETSC_EXTERN PetscMPIInt PetscGlobalSize;
1949: PETSC_EXTERN PetscErrorCode PetscIntView(PetscInt,const PetscInt[],PetscViewer);
1950: PETSC_EXTERN PetscErrorCode PetscRealView(PetscInt,const PetscReal[],PetscViewer);
1951: PETSC_EXTERN PetscErrorCode PetscScalarView(PetscInt,const PetscScalar[],PetscViewer);
1953: #include <stddef.h>
1954: #include <string.h> /* for memcpy, memset */
1955: #if defined(PETSC_HAVE_STDLIB_H)
1956: #include <stdlib.h>
1957: #endif
1959: #if defined(PETSC_HAVE_XMMINTRIN_H) && !defined(__CUDACC__)
1960: #include <xmmintrin.h>
1961: #endif
1963: /*@C
1964: PetscMemcpy - Copies n bytes, beginning at location b, to the space
1965: beginning at location a. The two memory regions CANNOT overlap, use
1966: PetscMemmove() in that case.
1968: Not Collective
1970: Input Parameters:
1971: + b - pointer to initial memory space
1972: - n - length (in bytes) of space to copy
1974: Output Parameter:
1975: . a - pointer to copy space
1977: Level: intermediate
1979: Compile Option:
1980: PETSC_PREFER_DCOPY_FOR_MEMCPY will cause the BLAS dcopy() routine to be used
1981: for memory copies on double precision values.
1982: PETSC_PREFER_COPY_FOR_MEMCPY will cause C code to be used
1983: for memory copies on double precision values.
1984: PETSC_PREFER_FORTRAN_FORMEMCPY will cause Fortran code to be used
1985: for memory copies on double precision values.
1987: Note:
1988: This routine is analogous to memcpy().
1990: Developer Note: this is inlined for fastest performance
1992: Concepts: memory^copying
1993: Concepts: copying^memory
1995: .seealso: PetscMemmove()
1997: @*/
1998: PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n)
1999: {
2000: #if defined(PETSC_USE_DEBUG)
2001: size_t al = (size_t) a,bl = (size_t) b;
2002: size_t nl = (size_t) n;
2004: if (n > 0 && !b) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy from a null pointer");
2005: if (n > 0 && !a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to copy to a null pointer");
2006: #else
2008: #endif
2009: if (a != b && n > 0) {
2010: #if defined(PETSC_USE_DEBUG)
2011: if ((al > bl && (al - bl) < nl) || (bl - al) < nl) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Memory regions overlap: either use PetscMemmov()\n\
2012: or make sure your copy regions and lengths are correct. \n\
2013: Length (bytes) %ld first address %ld second address %ld",nl,al,bl);
2014: #endif
2015: #if (defined(PETSC_PREFER_DCOPY_FOR_MEMCPY) || defined(PETSC_PREFER_COPY_FOR_MEMCPY) || defined(PETSC_PREFER_FORTRAN_FORMEMCPY))
2016: if (!(a % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
2017: size_t len = n/sizeof(PetscScalar);
2018: #if defined(PETSC_PREFER_DCOPY_FOR_MEMCPY)
2019: PetscBLASInt one = 1,blen;
2021: PetscBLASIntCast(len,&blen);
2022: PetscStackCallBLAS("BLAScopy",BLAScopy_(&blen,(PetscScalar *)b,&one,(PetscScalar *)a,&one));
2023: #elif defined(PETSC_PREFER_FORTRAN_FORMEMCPY)
2024: fortrancopy_(&len,(PetscScalar*)b,(PetscScalar*)a);
2025: #else
2026: size_t i;
2027: PetscScalar *x = (PetscScalar*)b, *y = (PetscScalar*)a;
2028: for (i=0; i<len; i++) y[i] = x[i];
2029: #endif
2030: } else {
2031: memcpy((char*)(a),(char*)(b),n);
2032: }
2033: #else
2034: memcpy((char*)(a),(char*)(b),n);
2035: #endif
2036: }
2037: return(0);
2038: }
2040: /*@C
2041: PetscMemzero - Zeros the specified memory.
2043: Not Collective
2045: Input Parameters:
2046: + a - pointer to beginning memory location
2047: - n - length (in bytes) of memory to initialize
2049: Level: intermediate
2051: Compile Option:
2052: PETSC_PREFER_BZERO - on certain machines (the IBM RS6000) the bzero() routine happens
2053: to be faster than the memset() routine. This flag causes the bzero() routine to be used.
2055: Developer Note: this is inlined for fastest performance
2057: Concepts: memory^zeroing
2058: Concepts: zeroing^memory
2060: .seealso: PetscMemcpy()
2061: @*/
2062: PETSC_STATIC_INLINE PetscErrorCode PetscMemzero(void *a,size_t n)
2063: {
2064: if (n > 0) {
2065: #if defined(PETSC_USE_DEBUG)
2066: if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NULL,"Trying to zero at a null pointer");
2067: #endif
2068: #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO)
2069: if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
2070: size_t i,len = n/sizeof(PetscScalar);
2071: PetscScalar *x = (PetscScalar*)a;
2072: for (i=0; i<len; i++) x[i] = 0.0;
2073: } else {
2074: #elif defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
2075: if (!(((long) a) % sizeof(PetscScalar)) && !(n % sizeof(PetscScalar))) {
2076: PetscInt len = n/sizeof(PetscScalar);
2077: fortranzero_(&len,(PetscScalar*)a);
2078: } else {
2079: #endif
2080: #if defined(PETSC_PREFER_BZERO)
2081: bzero((char *)a,n);
2082: #else
2083: memset((char*)a,0,n);
2084: #endif
2085: #if defined(PETSC_PREFER_ZERO_FOR_MEMZERO) || defined(PETSC_PREFER_FORTRAN_FOR_MEMZERO)
2086: }
2087: #endif
2088: }
2089: return 0;
2090: }
2092: /*MC
2093: PetscPrefetchBlock - Prefetches a block of memory
2095: Synopsis:
2096: #include <petscsys.h>
2097: void PetscPrefetchBlock(const anytype *a,size_t n,int rw,int t)
2099: Not Collective
2101: Input Parameters:
2102: + a - pointer to first element to fetch (any type but usually PetscInt or PetscScalar)
2103: . n - number of elements to fetch
2104: . rw - 1 if the memory will be written to, otherwise 0 (ignored by many processors)
2105: - t - temporal locality (PETSC_PREFETCH_HINT_{NTA,T0,T1,T2}), see note
2107: Level: developer
2109: Notes:
2110: The last two arguments (rw and t) must be compile-time constants.
2112: Adopting Intel's x86/x86-64 conventions, there are four levels of temporal locality. Not all architectures offer
2113: equivalent locality hints, but the following macros are always defined to their closest analogue.
2114: + PETSC_PREFETCH_HINT_NTA - Non-temporal. Prefetches directly to L1, evicts to memory (skips higher level cache unless it was already there when prefetched).
2115: . PETSC_PREFETCH_HINT_T0 - Fetch to all levels of cache and evict to the closest level. Use this when the memory will be reused regularly despite necessary eviction from L1.
2116: . PETSC_PREFETCH_HINT_T1 - Fetch to level 2 and higher (not L1).
2117: - PETSC_PREFETCH_HINT_T2 - Fetch to high-level cache only. (On many systems, T0 and T1 are equivalent.)
2119: This function does nothing on architectures that do not support prefetch and never errors (even if passed an invalid
2120: address).
2122: Concepts: memory
2123: M*/
2124: #define PetscPrefetchBlock(a,n,rw,t) do { \
2125: const char *_p = (const char*)(a),*_end = (const char*)((a)+(n)); \
2126: for ( ; _p < _end; _p += PETSC_LEVEL1_DCACHE_LINESIZE) PETSC_Prefetch(_p,(rw),(t)); \
2127: } while (0)
2129: /*
2130: Determine if some of the kernel computation routines use
2131: Fortran (rather than C) for the numerical calculations. On some machines
2132: and compilers (like complex numbers) the Fortran version of the routines
2133: is faster than the C/C++ versions. The flag --with-fortran-kernels
2134: should be used with ./configure to turn these on.
2135: */
2136: #if defined(PETSC_USE_FORTRAN_KERNELS)
2138: #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTCRL)
2139: #define PETSC_USE_FORTRAN_KERNEL_MULTCRL
2140: #endif
2142: #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM)
2143: #define PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM
2144: #endif
2146: #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTAIJ)
2147: #define PETSC_USE_FORTRAN_KERNEL_MULTAIJ
2148: #endif
2150: #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ)
2151: #define PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ
2152: #endif
2154: #if !defined(PETSC_USE_FORTRAN_KERNEL_NORM)
2155: #define PETSC_USE_FORTRAN_KERNEL_NORM
2156: #endif
2158: #if !defined(PETSC_USE_FORTRAN_KERNEL_MAXPY)
2159: #define PETSC_USE_FORTRAN_KERNEL_MAXPY
2160: #endif
2162: #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ)
2163: #define PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ
2164: #endif
2166: #if !defined(PETSC_USE_FORTRAN_KERNEL_RELAXAIJ)
2167: #define PETSC_USE_FORTRAN_KERNEL_RELAXAIJ
2168: #endif
2170: #if !defined(PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ)
2171: #define PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ
2172: #endif
2174: #if !defined(PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ)
2175: #define PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ
2176: #endif
2178: #if !defined(PETSC_USE_FORTRAN_KERNEL_MDOT)
2179: #define PETSC_USE_FORTRAN_KERNEL_MDOT
2180: #endif
2182: #if !defined(PETSC_USE_FORTRAN_KERNEL_XTIMESY)
2183: #define PETSC_USE_FORTRAN_KERNEL_XTIMESY
2184: #endif
2186: #if !defined(PETSC_USE_FORTRAN_KERNEL_AYPX)
2187: #define PETSC_USE_FORTRAN_KERNEL_AYPX
2188: #endif
2190: #if !defined(PETSC_USE_FORTRAN_KERNEL_WAXPY)
2191: #define PETSC_USE_FORTRAN_KERNEL_WAXPY
2192: #endif
2194: #endif
2196: /*
2197: Macros for indicating code that should be compiled with a C interface,
2198: rather than a C++ interface. Any routines that are dynamically loaded
2199: (such as the PCCreate_XXX() routines) must be wrapped so that the name
2200: mangler does not change the functions symbol name. This just hides the
2201: ugly extern "C" {} wrappers.
2202: */
2203: #if defined(__cplusplus)
2204: #define EXTERN_C_BEGIN extern "C" {
2205: #define EXTERN_C_END }
2206: #else
2207: #define EXTERN_C_BEGIN
2208: #define EXTERN_C_END
2209: #endif
2211: /* --------------------------------------------------------------------*/
2213: /*MC
2214: MPI_Comm - the basic object used by MPI to determine which processes are involved in a
2215: communication
2217: Level: beginner
2219: Note: This manual page is a place-holder because MPICH does not have a manual page for MPI_Comm
2221: .seealso: PETSC_COMM_WORLD, PETSC_COMM_SELF
2222: M*/
2224: /*MC
2225: PetscScalar - PETSc type that represents either a double precision real number, a double precision
2226: complex number, a single precision real number, a __float128 real or complex or a __fp16 real - if the code is configured
2227: with --with-scalar-type=real,complex --with-precision=single,double,__float128,__fp16
2229: Notes:
2230: For MPI calls that require datatypes, use MPIU_SCALAR as the datatype for PetscScalar and MPIU_SUM, MPIU_MAX etc for operations. They will automatically work correctly regardless of the size of PetscScalar.
2232: Level: beginner
2234: .seealso: PetscReal, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT
2235: M*/
2237: /*MC
2238: PetscComplex - PETSc type that represents a complex number with precision matching that of PetscReal.
2240: Synopsis:
2241: #include <petscsys.h>
2242: PetscComplex number = 1. + 2.*PETSC_i;
2244: Notes:
2245: For MPI calls that require datatypes, use MPIU_COMPLEX as the datatype for PetscComplex and MPIU_SUM etc for operations.
2246: They will automatically work correctly regardless of the size of PetscComplex.
2248: See PetscScalar for details on how to ./configure the size of PetscReal
2250: Complex numbers are automatically available if PETSc was able to find a working complex implementation
2252: Level: beginner
2254: .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT, PETSC_i
2255: M*/
2257: /*MC
2258: PetscReal - PETSc type that represents a real number version of PetscScalar
2261: Notes:
2262: For MPI calls that require datatypes, use MPIU_REAL as the datatype for PetscScalar and MPIU_SUM, MPIU_MAX, etc. for operations.
2263: They will automatically work correctly regardless of the size of PetscReal.
2265: See PetscScalar for details on how to ./configure the size of PetscReal.
2267: Level: beginner
2269: .seealso: PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT
2270: M*/
2272: /*MC
2273: MPIU_SCALAR - MPI datatype corresponding to PetscScalar
2275: Notes:
2276: In MPI calls that require an MPI datatype that matches a PetscScalar or array of PetscScalar values, pass this value.
2278: Level: beginner
2280: .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_COMPLEX, MPIU_INT
2281: M*/
2283: /*MC
2284: MPIU_COMPLEX - MPI datatype corresponding to PetscComplex
2286: Notes:
2287: In MPI calls that require an MPI datatype that matches a PetscComplex or array of PetscComplex values, pass this value.
2289: Level: beginner
2291: .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_REAL, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT, PETSC_i
2292: M*/
2294: /*MC
2295: MPIU_REAL - MPI datatype corresponding to PetscReal
2297: Notes:
2298: In MPI calls that require an MPI datatype that matches a PetscReal or array of PetscReal values, pass this value.
2300: Level: beginner
2302: .seealso: PetscReal, PetscScalar, PetscComplex, PetscInt, MPIU_SCALAR, MPIU_COMPLEX, MPIU_INT
2303: M*/
2305: #if defined(PETSC_HAVE_MPIIO)
2306: #if !defined(PETSC_WORDS_BIGENDIAN)
2307: PETSC_EXTERN PetscErrorCode MPIU_File_write_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2308: PETSC_EXTERN PetscErrorCode MPIU_File_read_all(MPI_File,void*,PetscMPIInt,MPI_Datatype,MPI_Status*);
2309: #else
2310: #define MPIU_File_write_all(a,b,c,d,e) MPI_File_write_all(a,b,c,d,e)
2311: #define MPIU_File_read_all(a,b,c,d,e) MPI_File_read_all(a,b,c,d,e)
2312: #endif
2313: #endif
2315: /* the following petsc_static_inline require petscerror.h */
2317: /* Limit MPI to 32-bits */
2318: #define PETSC_MPI_INT_MAX 2147483647
2319: #define PETSC_MPI_INT_MIN -2147483647
2320: /* Limit BLAS to 32-bits */
2321: #define PETSC_BLAS_INT_MAX 2147483647
2322: #define PETSC_BLAS_INT_MIN -2147483647
2324: /*@C
2325: PetscBLASIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscBLASInt (which may be 32 bits in size), generates an
2326: error if the PetscBLASInt is not large enough to hold the number.
2328: Not Collective
2330: Input Parameter:
2331: . a - the PetscInt value
2333: Output Parameter:
2334: . b - the resulting PetscBLASInt value
2336: Level: advanced
2338: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscMPIIntCast()
2339: @*/
2340: PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b)
2341: {
2343: *b = (PetscBLASInt)(a);
2344: #if defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_HAVE_64BIT_BLAS_INDICES)
2345: if ((a) > PETSC_BLAS_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for BLAS/LAPACK");
2346: #endif
2347: return(0);
2348: }
2350: /*@C
2351: PetscMPIIntCast - casts a PetscInt (which may be 64 bits in size) to a PetscMPIInt (which may be 32 bits in size), generates an
2352: error if the PetscMPIInt is not large enough to hold the number.
2354: Not Collective
2356: Input Parameter:
2357: . a - the PetscInt value
2359: Output Parameter:
2360: . b - the resulting PetscMPIInt value
2362: Level: advanced
2364: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast()
2365: @*/
2366: PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b)
2367: {
2369: *b = (PetscMPIInt)(a);
2370: #if defined(PETSC_USE_64BIT_INDICES)
2371: if ((a) > PETSC_MPI_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for MPI");
2372: #endif
2373: return(0);
2374: }
2376: #define PetscInt64Mult(a,b) ((PetscInt64)(a))*((PetscInt64)(b))
2378: /*@C
2380: PetscRealIntMultTruncate - Computes the product of a positive PetscReal and a positive PetscInt and truncates the value to slightly less than the maximal possible value
2382: Not Collective
2384: Input Parameter:
2385: + a - the PetscReal value
2386: - b - the second value
2388: Returns:
2389: the result as a PetscInt value
2391: Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64
2392: Use PetscIntMultTruncate() to compute the product of two positive PetscInt and truncate to fit a PetscInt
2393: Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt
2395: Developers Note:
2396: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks.
2398: This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
2400: Level: advanced
2402: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
2403: @*/
2404: PETSC_STATIC_INLINE PetscInt PetscRealIntMultTruncate(PetscReal a,PetscInt b)
2405: {
2406: PetscInt64 r;
2408: r = (PetscInt64) (a*(PetscReal)b);
2409: if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
2410: return (PetscInt) r;
2411: }
2413: /*@C
2415: PetscIntMultTruncate - Computes the product of two positive PetscInt and truncates the value to slightly less than the maximal possible value
2417: Not Collective
2419: Input Parameter:
2420: + a - the PetscInt value
2421: - b - the second value
2423: Returns:
2424: the result as a PetscInt value
2426: Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64
2427: Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt
2428: Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt
2430: Developers Note: We currently assume that PetscInt addition can never overflow, this is obviously wrong but requires many more checks.
2432: This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
2434: Level: advanced
2436: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
2437: @*/
2438: PETSC_STATIC_INLINE PetscInt PetscIntMultTruncate(PetscInt a,PetscInt b)
2439: {
2440: PetscInt64 r;
2442: r = PetscInt64Mult(a,b);
2443: if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
2444: return (PetscInt) r;
2445: }
2447: /*@C
2449: PetscIntSumTruncate - Computes the sum of two positive PetscInt and truncates the value to slightly less than the maximal possible value
2451: Not Collective
2453: Input Parameter:
2454: + a - the PetscInt value
2455: - b - the second value
2457: Returns:
2458: the result as a PetscInt value
2460: Use PetscInt64Mult() to compute the product of two PetscInt as a PetscInt64
2461: Use PetscRealIntMultTruncate() to compute the product of a PetscReal and a PetscInt and truncate to fit a PetscInt
2462: Use PetscIntMultError() to compute the product of two PetscInt if you wish to generate an error if the result will not fit in a PetscInt
2464: This is used where we compute approximate sizes for workspace and need to insure the workspace is index-able.
2466: Level: advanced
2468: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
2469: @*/
2470: PETSC_STATIC_INLINE PetscInt PetscIntSumTruncate(PetscInt a,PetscInt b)
2471: {
2472: PetscInt64 r;
2474: r = ((PetscInt64)a) + ((PetscInt64)b);
2475: if (r > PETSC_MAX_INT - 100) r = PETSC_MAX_INT - 100;
2476: return (PetscInt) r;
2477: }
2479: /*@C
2481: PetscIntMultError - Computes the product of two positive PetscInt and generates an error with overflow.
2483: Not Collective
2485: Input Parameter:
2486: + a - the PetscInt value
2487: - b - the second value
2489: Output Parameter:ma
2490: . result - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows
2492: Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64
2493: Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt
2495: Developers Note: We currently assume that PetscInt addition does not overflow, this is obviously wrong but requires many more checks.
2497: Level: advanced
2499: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscIntMult64(), PetscIntSumError()
2500: @*/
2501: PETSC_STATIC_INLINE PetscErrorCode PetscIntMultError(PetscInt a,PetscInt b,PetscInt *result)
2502: {
2503: PetscInt64 r;
2506: r = PetscInt64Mult(a,b);
2507: #if !defined(PETSC_USE_64BIT_INDICES)
2508: if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Product of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b);
2509: #endif
2510: if (result) *result = (PetscInt) r;
2511: return(0);
2512: }
2514: /*@C
2516: PetscIntSumError - Computes the sum of two positive PetscInt and generates an error with overflow.
2518: Not Collective
2520: Input Parameter:
2521: + a - the PetscInt value
2522: - b - the second value
2524: Output Parameter:ma
2525: . c - the result as a PetscInt value, or NULL if you do not want the result, you just want to check if it overflows
2527: Use PetscInt64Mult() to compute the product of two 32 bit PetscInt and store in a PetscInt64
2528: Use PetscIntMultTruncate() to compute the product of two PetscInt and truncate it to fit in a PetscInt
2530: Level: advanced
2532: .seealso: PetscBLASInt, PetscMPIInt, PetscInt, PetscBLASIntCast(), PetscInt64Mult()
2533: @*/
2534: PETSC_STATIC_INLINE PetscErrorCode PetscIntSumError(PetscInt a,PetscInt b,PetscInt *result)
2535: {
2536: PetscInt64 r;
2539: r = ((PetscInt64)a) + ((PetscInt64)b);
2540: #if !defined(PETSC_USE_64BIT_INDICES)
2541: if (r > PETSC_MAX_INT) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sum of two integer %d %d overflow, you must ./configure PETSc with --with-64-bit-indices for the case you are running",a,b);
2542: #endif
2543: if (result) *result = (PetscInt) r;
2544: return(0);
2545: }
2546:
2547: /*
2548: The IBM include files define hz, here we hide it so that it may be used as a regular user variable.
2549: */
2550: #if defined(hz)
2551: #undef hz
2552: #endif
2554: /* For arrays that contain filenames or paths */
2557: #if defined(PETSC_HAVE_LIMITS_H)
2558: #include <limits.h>
2559: #endif
2560: #if defined(PETSC_HAVE_SYS_PARAM_H)
2561: #include <sys/param.h>
2562: #endif
2563: #if defined(PETSC_HAVE_SYS_TYPES_H)
2564: #include <sys/types.h>
2565: #endif
2566: #if defined(MAXPATHLEN)
2567: # define PETSC_MAX_PATH_LEN MAXPATHLEN
2568: #elif defined(MAX_PATH)
2569: # define PETSC_MAX_PATH_LEN MAX_PATH
2570: #elif defined(_MAX_PATH)
2571: # define PETSC_MAX_PATH_LEN _MAX_PATH
2572: #else
2573: # define PETSC_MAX_PATH_LEN 4096
2574: #endif
2576: /*MC
2578: PETSC_VERSION - This manual page provides information about how PETSc documents and uses its version information. This information is available to both C/C++
2579: and Fortran compilers when petscsys.h is included.
2582: The current PETSc version and the API for accessing it are defined in petscversion.h
2584: The complete version number is given as the triple PETSC_VERSION_MAJOR.PETSC_VERSION_MINOR.PETSC_VERSION_SUBMINOR (in short hand x.y.z)
2586: A change in the minor version number (y) indicates possible/likely changes in the PETSc API. Note this is different than with the semantic versioning convention
2587: where only a change in the major version number (x) indicates a change in the API.
2589: A subminor greater than zero indicates a patch release. Version x.y.z maintains source and binary compatibility with version x.y.w for all z and w
2591: Use the macros PETSC_VERSION_EQ(x,y,z), PETSC_VERSION_LT(x,y,z), PETSC_VERSION_LE(x,y,z), PETSC_VERSION_GT(x,y,z),
2592: PETSC_VERSION_GE(x,y,z) to determine if the current version is equal to, less than, less than or equal to, greater than or greater than or equal to a given
2593: version number (x.y.z).
2595: PETSC_RELEASE_DATE is the date the x.y version was released (i.e. the version before any patch releases)
2597: PETSC_VERSION_DATE is the date the x.y.z version was released
2599: PETSC_VERSION_GIT is the last git commit to the repository given in the form vx.y.z-wwwww
2601: PETSC_VERSION_DATE_GIT is the date of the last git commit to the repository
2603: Level: intermediate
2605: PETSC_VERSION_() and PETSC_VERSION_PATCH are deprecated and will eventually be removed. For several releases PETSC_VERSION_PATCH is always 0
2607: M*/
2609: /*MC
2611: UsingFortran - To use PETSc with Fortran you must use both PETSc include files and modules. At the beginning
2612: of every function and module definition you need something like
2614: $
2615: $#include "petsc/finclude/petscXXX.h"
2616: $ use petscXXX
2618: You can declare PETSc variables using either of the following.
2620: $ XXX variablename
2621: $ type(tXXX) variablename
2623: For example,
2625: $#include "petsc/finclude/petscvec.h"
2626: $ use petscvec
2627: $
2628: $ Vec b
2629: $ type(tVec) x
2631: Level: beginner
2633: M*/
2635: PETSC_EXTERN PetscErrorCode PetscGetArchType(char[],size_t);
2636: PETSC_EXTERN PetscErrorCode PetscGetHostName(char[],size_t);
2637: PETSC_EXTERN PetscErrorCode PetscGetUserName(char[],size_t);
2638: PETSC_EXTERN PetscErrorCode PetscGetProgramName(char[],size_t);
2639: PETSC_EXTERN PetscErrorCode PetscSetProgramName(const char[]);
2640: PETSC_EXTERN PetscErrorCode PetscGetDate(char[],size_t);
2641: PETSC_EXTERN PetscErrorCode PetscGetVersion(char[], size_t);
2642: PETSC_EXTERN PetscErrorCode PetscGetVersionNumber(PetscInt*,PetscInt*,PetscInt*,PetscInt*);
2644: PETSC_EXTERN PetscErrorCode PetscSortInt(PetscInt,PetscInt[]);
2645: PETSC_EXTERN PetscErrorCode PetscSortedRemoveDupsInt(PetscInt*,PetscInt[]);
2646: PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsInt(PetscInt*,PetscInt[]);
2647: PETSC_EXTERN PetscErrorCode PetscFindInt(PetscInt, PetscInt, const PetscInt[], PetscInt*);
2648: PETSC_EXTERN PetscErrorCode PetscFindMPIInt(PetscMPIInt, PetscInt, const PetscMPIInt[], PetscInt*);
2649: PETSC_EXTERN PetscErrorCode PetscSortIntWithPermutation(PetscInt,const PetscInt[],PetscInt[]);
2650: PETSC_EXTERN PetscErrorCode PetscSortStrWithPermutation(PetscInt,const char*[],PetscInt[]);
2651: PETSC_EXTERN PetscErrorCode PetscSortIntWithArray(PetscInt,PetscInt[],PetscInt[]);
2652: PETSC_EXTERN PetscErrorCode PetscSortIntWithArrayPair(PetscInt,PetscInt[],PetscInt[],PetscInt[]);
2653: PETSC_EXTERN PetscErrorCode PetscSortMPIInt(PetscInt,PetscMPIInt[]);
2654: PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsMPIInt(PetscInt*,PetscMPIInt[]);
2655: PETSC_EXTERN PetscErrorCode PetscSortMPIIntWithArray(PetscMPIInt,PetscMPIInt[],PetscMPIInt[]);
2656: PETSC_EXTERN PetscErrorCode PetscSortIntWithScalarArray(PetscInt,PetscInt[],PetscScalar[]);
2657: PETSC_EXTERN PetscErrorCode PetscSortIntWithDataArray(PetscInt,PetscInt[],void*,size_t,void*);
2658: PETSC_EXTERN PetscErrorCode PetscSortReal(PetscInt,PetscReal[]);
2659: PETSC_EXTERN PetscErrorCode PetscSortRealWithArrayInt(PetscInt,PetscReal[],PetscInt[]);
2660: PETSC_EXTERN PetscErrorCode PetscSortRealWithPermutation(PetscInt,const PetscReal[],PetscInt[]);
2661: PETSC_EXTERN PetscErrorCode PetscSortRemoveDupsReal(PetscInt*,PetscReal[]);
2662: PETSC_EXTERN PetscErrorCode PetscFindReal(PetscReal,PetscInt,const PetscReal[],PetscReal,PetscInt*);
2663: PETSC_EXTERN PetscErrorCode PetscSortSplit(PetscInt,PetscInt,PetscScalar[],PetscInt[]);
2664: PETSC_EXTERN PetscErrorCode PetscSortSplitReal(PetscInt,PetscInt,PetscReal[],PetscInt[]);
2665: PETSC_EXTERN PetscErrorCode PetscProcessTree(PetscInt,const PetscBool [],const PetscInt[],PetscInt*,PetscInt**,PetscInt**,PetscInt**,PetscInt**);
2666: PETSC_EXTERN PetscErrorCode PetscMergeIntArrayPair(PetscInt,const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],PetscInt*,PetscInt**,PetscInt**);
2667: PETSC_EXTERN PetscErrorCode PetscMergeIntArray(PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscInt*,PetscInt**);
2668: PETSC_EXTERN PetscErrorCode PetscMergeMPIIntArray(PetscInt,const PetscMPIInt[],PetscInt,const PetscMPIInt[],PetscInt*,PetscMPIInt**);
2670: PETSC_EXTERN PetscErrorCode PetscSetDisplay(void);
2671: PETSC_EXTERN PetscErrorCode PetscGetDisplay(char[],size_t);
2673: /*J
2674: PetscRandomType - String with the name of a PETSc randomizer
2676: Level: beginner
2678: Notes:
2679: To use SPRNG or RANDOM123 you must have ./configure PETSc
2680: with the option --download-sprng or --download-random123
2682: .seealso: PetscRandomSetType(), PetscRandom, PetscRandomCreate()
2683: J*/
2684: typedef const char* PetscRandomType;
2685: #define PETSCRAND "rand"
2686: #define PETSCRAND48 "rand48"
2687: #define PETSCSPRNG "sprng"
2688: #define PETSCRANDER48 "rander48"
2689: #define PETSCRANDOM123 "random123"
2691: /* Logging support */
2692: PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;
2694: PETSC_EXTERN PetscErrorCode PetscRandomInitializePackage(void);
2696: /*S
2697: PetscRandom - Abstract PETSc object that manages generating random numbers
2699: Level: intermediate
2701: Concepts: random numbers
2703: .seealso: PetscRandomCreate(), PetscRandomGetValue(), PetscRandomType
2704: S*/
2705: typedef struct _p_PetscRandom* PetscRandom;
2707: /* Dynamic creation and loading functions */
2708: PETSC_EXTERN PetscFunctionList PetscRandomList;
2710: PETSC_EXTERN PetscErrorCode PetscRandomRegister(const char[],PetscErrorCode (*)(PetscRandom));
2711: PETSC_EXTERN PetscErrorCode PetscRandomSetType(PetscRandom, PetscRandomType);
2712: PETSC_EXTERN PetscErrorCode PetscRandomSetFromOptions(PetscRandom);
2713: PETSC_EXTERN PetscErrorCode PetscRandomGetType(PetscRandom, PetscRandomType*);
2714: PETSC_STATIC_INLINE PetscErrorCode PetscRandomViewFromOptions(PetscRandom A,PetscObject obj,const char name[]) {return PetscObjectViewFromOptions((PetscObject)A,obj,name);}
2715: PETSC_EXTERN PetscErrorCode PetscRandomView(PetscRandom,PetscViewer);
2717: PETSC_EXTERN PetscErrorCode PetscRandomCreate(MPI_Comm,PetscRandom*);
2718: PETSC_EXTERN PetscErrorCode PetscRandomGetValue(PetscRandom,PetscScalar*);
2719: PETSC_EXTERN PetscErrorCode PetscRandomGetValueReal(PetscRandom,PetscReal*);
2720: PETSC_EXTERN PetscErrorCode PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*);
2721: PETSC_EXTERN PetscErrorCode PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar);
2722: PETSC_EXTERN PetscErrorCode PetscRandomSetSeed(PetscRandom,unsigned long);
2723: PETSC_EXTERN PetscErrorCode PetscRandomGetSeed(PetscRandom,unsigned long *);
2724: PETSC_EXTERN PetscErrorCode PetscRandomSeed(PetscRandom);
2725: PETSC_EXTERN PetscErrorCode PetscRandomDestroy(PetscRandom*);
2727: PETSC_EXTERN PetscErrorCode PetscGetFullPath(const char[],char[],size_t);
2728: PETSC_EXTERN PetscErrorCode PetscGetRelativePath(const char[],char[],size_t);
2729: PETSC_EXTERN PetscErrorCode PetscGetWorkingDirectory(char[],size_t);
2730: PETSC_EXTERN PetscErrorCode PetscGetRealPath(const char[],char[]);
2731: PETSC_EXTERN PetscErrorCode PetscGetHomeDirectory(char[],size_t);
2732: PETSC_EXTERN PetscErrorCode PetscTestFile(const char[],char,PetscBool *);
2733: PETSC_EXTERN PetscErrorCode PetscTestDirectory(const char[],char,PetscBool *);
2734: PETSC_EXTERN PetscErrorCode PetscMkdir(const char[]);
2735: PETSC_EXTERN PetscErrorCode PetscRMTree(const char[]);
2737: PETSC_EXTERN PetscErrorCode PetscBinaryRead(int,void*,PetscInt,PetscDataType);
2738: PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedRead(MPI_Comm,int,void*,PetscInt,PetscDataType);
2739: PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedWrite(MPI_Comm,int,void*,PetscInt,PetscDataType,PetscBool );
2740: PETSC_EXTERN PetscErrorCode PetscBinaryWrite(int,void*,PetscInt,PetscDataType,PetscBool );
2741: PETSC_EXTERN PetscErrorCode PetscBinaryOpen(const char[],PetscFileMode,int *);
2742: PETSC_EXTERN PetscErrorCode PetscBinaryClose(int);
2743: PETSC_EXTERN PetscErrorCode PetscSharedTmp(MPI_Comm,PetscBool *);
2744: PETSC_EXTERN PetscErrorCode PetscSharedWorkingDirectory(MPI_Comm,PetscBool *);
2745: PETSC_EXTERN PetscErrorCode PetscGetTmp(MPI_Comm,char[],size_t);
2746: PETSC_EXTERN PetscErrorCode PetscFileRetrieve(MPI_Comm,const char[],char[],size_t,PetscBool *);
2747: PETSC_EXTERN PetscErrorCode PetscLs(MPI_Comm,const char[],char[],size_t,PetscBool *);
2748: #if defined(PETSC_USE_SOCKET_VIEWER)
2749: PETSC_EXTERN PetscErrorCode PetscOpenSocket(const char[],int,int*);
2750: #endif
2752: /*
2753: In binary files variables are stored using the following lengths,
2754: regardless of how they are stored in memory on any one particular
2755: machine. Use these rather then sizeof() in computing sizes for
2756: PetscBinarySeek().
2757: */
2758: #define PETSC_BINARY_INT_SIZE (32/8)
2759: #define PETSC_BINARY_FLOAT_SIZE (32/8)
2760: #define PETSC_BINARY_CHAR_SIZE (8/8)
2761: #define PETSC_BINARY_SHORT_SIZE (16/8)
2762: #define PETSC_BINARY_DOUBLE_SIZE (64/8)
2763: #define PETSC_BINARY_SCALAR_SIZE sizeof(PetscScalar)
2765: /*E
2766: PetscBinarySeekType - argument to PetscBinarySeek()
2768: Level: advanced
2770: .seealso: PetscBinarySeek(), PetscBinarySynchronizedSeek()
2771: E*/
2772: typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;
2773: PETSC_EXTERN PetscErrorCode PetscBinarySeek(int,off_t,PetscBinarySeekType,off_t*);
2774: PETSC_EXTERN PetscErrorCode PetscBinarySynchronizedSeek(MPI_Comm,int,off_t,PetscBinarySeekType,off_t*);
2775: PETSC_EXTERN PetscErrorCode PetscByteSwap(void *,PetscDataType,PetscInt);
2777: PETSC_EXTERN PetscErrorCode PetscSetDebugTerminal(const char[]);
2778: PETSC_EXTERN PetscErrorCode PetscSetDebugger(const char[],PetscBool );
2779: PETSC_EXTERN PetscErrorCode PetscSetDefaultDebugger(void);
2780: PETSC_EXTERN PetscErrorCode PetscSetDebuggerFromString(const char*);
2781: PETSC_EXTERN PetscErrorCode PetscAttachDebugger(void);
2782: PETSC_EXTERN PetscErrorCode PetscStopForDebugger(void);
2784: PETSC_EXTERN PetscErrorCode PetscGatherNumberOfMessages(MPI_Comm,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt*);
2785: PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**);
2786: PETSC_EXTERN PetscErrorCode PetscGatherMessageLengths2(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscMPIInt**,PetscMPIInt**,PetscMPIInt**);
2787: PETSC_EXTERN PetscErrorCode PetscPostIrecvInt(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscInt***,MPI_Request**);
2788: PETSC_EXTERN PetscErrorCode PetscPostIrecvScalar(MPI_Comm,PetscMPIInt,PetscMPIInt,const PetscMPIInt[],const PetscMPIInt[],PetscScalar***,MPI_Request**);
2789: PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSided(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt*,const void*,PetscMPIInt*,PetscMPIInt**,void*)
2790: PetscAttrMPIPointerWithType(6,3);
2791: PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedF(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt,
2792: PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*),
2793: PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx)
2794: PetscAttrMPIPointerWithType(6,3);
2795: PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedFReq(MPI_Comm,PetscMPIInt,MPI_Datatype,PetscMPIInt,const PetscMPIInt[],const void*,PetscMPIInt*,PetscMPIInt**,void*,PetscMPIInt,
2796: MPI_Request**,MPI_Request**,
2797: PetscErrorCode (*send)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,PetscMPIInt,void*,MPI_Request[],void*),
2798: PetscErrorCode (*recv)(MPI_Comm,const PetscMPIInt[],PetscMPIInt,void*,MPI_Request[],void*),void *ctx)
2799: PetscAttrMPIPointerWithType(6,3);
2801: /*E
2802: PetscBuildTwoSidedType - algorithm for setting up two-sided communication
2804: $ PETSC_BUILDTWOSIDED_ALLREDUCE - classical algorithm using an MPI_Allreduce with
2805: $ a buffer of length equal to the communicator size. Not memory-scalable due to
2806: $ the large reduction size. Requires only MPI-1.
2807: $ PETSC_BUILDTWOSIDED_IBARRIER - nonblocking algorithm based on MPI_Issend and MPI_Ibarrier.
2808: $ Proved communication-optimal in Hoefler, Siebert, and Lumsdaine (2010). Requires MPI-3.
2809: $ PETSC_BUILDTWOSIDED_REDSCATTER - similar to above, but use more optimized function
2810: $ that only communicates the part of the reduction that is necessary. Requires MPI-2.
2812: Level: developer
2814: .seealso: PetscCommBuildTwoSided(), PetscCommBuildTwoSidedSetType(), PetscCommBuildTwoSidedGetType()
2815: E*/
2816: typedef enum {
2817: PETSC_BUILDTWOSIDED_NOTSET = -1,
2818: PETSC_BUILDTWOSIDED_ALLREDUCE = 0,
2819: PETSC_BUILDTWOSIDED_IBARRIER = 1,
2820: PETSC_BUILDTWOSIDED_REDSCATTER = 2
2821: /* Updates here must be accompanied by updates in finclude/petscsys.h and the string array in mpits.c */
2822: } PetscBuildTwoSidedType;
2823: PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[];
2824: PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedSetType(MPI_Comm,PetscBuildTwoSidedType);
2825: PETSC_EXTERN PetscErrorCode PetscCommBuildTwoSidedGetType(MPI_Comm,PetscBuildTwoSidedType*);
2827: PETSC_EXTERN PetscErrorCode PetscSSEIsEnabled(MPI_Comm,PetscBool *,PetscBool *);
2829: /*E
2830: InsertMode - Whether entries are inserted or added into vectors or matrices
2832: Level: beginner
2834: .seealso: VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2835: VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(),
2836: MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd()
2837: E*/
2838: typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;
2840: /*MC
2841: INSERT_VALUES - Put a value into a vector or matrix, overwrites any previous value
2843: Level: beginner
2845: .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2846: VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), ADD_VALUES,
2847: MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2849: M*/
2851: /*MC
2852: ADD_VALUES - Adds a value into a vector or matrix, if there previously was no value, just puts the
2853: value into that location
2855: Level: beginner
2857: .seealso: InsertMode, VecSetValues(), MatSetValues(), VecSetValue(), VecSetValuesBlocked(),
2858: VecSetValuesLocal(), VecSetValuesBlockedLocal(), MatSetValuesBlocked(), INSERT_VALUES,
2859: MatSetValuesBlockedLocal(), MatSetValuesLocal(), VecScatterBegin(), VecScatterEnd(), MAX_VALUES
2861: M*/
2863: /*MC
2864: MAX_VALUES - Puts the maximum of the scattered/gathered value and the current value into each location
2866: Level: beginner
2868: .seealso: InsertMode, VecScatterBegin(), VecScatterEnd(), ADD_VALUES, INSERT_VALUES
2870: M*/
2872: PETSC_EXTERN MPI_Comm PetscObjectComm(PetscObject);
2874: typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;
2875: PETSC_EXTERN const char *const PetscSubcommTypes[];
2877: /*S
2878: PetscSubcomm - A decomposition of an MPI communicator into subcommunicators
2880: Notes:
2881: After a call to PetscSubcommSetType(), PetscSubcommSetTypeGeneral(), or PetscSubcommSetFromOptions() one may call
2882: $ PetscSubcommChild() returns the associated subcommunicator on this process
2883: $ PetscSubcommContiguousParent() returns a parent communitor but with all child of the same subcommunicator having contiguous rank
2885: Sample Usage:
2886: PetscSubcommCreate()
2887: PetscSubcommSetNumber()
2888: PetscSubcommSetType(PETSC_SUBCOMM_INTERLACED);
2889: ccomm = PetscSubcommChild()
2890: PetscSubcommDestroy()
2892: Level: advanced
2894: Concepts: communicator, create
2896: Notes:
2897: $ PETSC_SUBCOMM_GENERAL - similar to MPI_Comm_split() each process sets the new communicator (color) they will belong to and the order within that communicator
2898: $ PETSC_SUBCOMM_CONTIGUOUS - each new communicator contains a set of process with contiguous ranks in the original MPI communicator
2899: $ PETSC_SUBCOMM_INTERLACED - each new communictor contains a set of processes equally far apart in rank from the others in that new communicator
2901: Example: Consider a communicator with six processes split into 3 subcommunicators.
2902: $ PETSC_SUBCOMM_CONTIGUOUS - the first communicator contains rank 0,1 the second rank 2,3 and the third rank 4,5 in the original ordering of the original communicator
2903: $ PETSC_SUBCOMM_INTERLACED - the first communicator contains rank 0,3, the second 1,4 and the third 2,5
2905: Developer Notes:
2906: This is used in objects such as PCREDUNDANT to manage the subcommunicators on which the redundant computations
2907: are performed.
2910: .seealso: PetscSubcommCreate(), PetscSubcommSetNumber(), PetscSubcommSetType(), PetscSubcommView(), PetscSubcommSetFromOptions()
2912: S*/
2913: typedef struct _n_PetscSubcomm* PetscSubcomm;
2915: struct _n_PetscSubcomm {
2916: MPI_Comm parent; /* parent communicator */
2917: MPI_Comm dupparent; /* duplicate parent communicator, under which the processors of this subcomm have contiguous rank */
2918: MPI_Comm child; /* the sub-communicator */
2919: PetscMPIInt n; /* num of subcommunicators under the parent communicator */
2920: PetscMPIInt color; /* color of processors belong to this communicator */
2921: PetscMPIInt *subsize; /* size of subcommunicator[color] */
2922: PetscSubcommType type;
2923: char *subcommprefix;
2924: };
2926: PETSC_STATIC_INLINE MPI_Comm PetscSubcommParent(PetscSubcomm scomm) {return scomm->parent;}
2927: PETSC_STATIC_INLINE MPI_Comm PetscSubcommChild(PetscSubcomm scomm) {return scomm->child;}
2928: PETSC_STATIC_INLINE MPI_Comm PetscSubcommContiguousParent(PetscSubcomm scomm) {return scomm->dupparent;}
2929: PETSC_EXTERN PetscErrorCode PetscSubcommCreate(MPI_Comm,PetscSubcomm*);
2930: PETSC_EXTERN PetscErrorCode PetscSubcommDestroy(PetscSubcomm*);
2931: PETSC_EXTERN PetscErrorCode PetscSubcommSetNumber(PetscSubcomm,PetscInt);
2932: PETSC_EXTERN PetscErrorCode PetscSubcommSetType(PetscSubcomm,PetscSubcommType);
2933: PETSC_EXTERN PetscErrorCode PetscSubcommSetTypeGeneral(PetscSubcomm,PetscMPIInt,PetscMPIInt);
2934: PETSC_EXTERN PetscErrorCode PetscSubcommView(PetscSubcomm,PetscViewer);
2935: PETSC_EXTERN PetscErrorCode PetscSubcommSetFromOptions(PetscSubcomm);
2936: PETSC_EXTERN PetscErrorCode PetscSubcommSetOptionsPrefix(PetscSubcomm,const char[]);
2938: /*S
2939: PetscHeap - A simple class for managing heaps
2941: Level: intermediate
2943: Concepts: random numbers
2945: .seealso: PetscHeapCreate(), PetscHeapAdd(), PetscHeapPop(), PetscHeapPeek(), PetscHeapStash(), PetscHeapUnstash(), PetscHeapView(), PetscHeapDestroy()
2946: S*/
2947: typedef struct _PetscHeap *PetscHeap;
2949: PETSC_EXTERN PetscErrorCode PetscHeapCreate(PetscInt,PetscHeap*);
2950: PETSC_EXTERN PetscErrorCode PetscHeapAdd(PetscHeap,PetscInt,PetscInt);
2951: PETSC_EXTERN PetscErrorCode PetscHeapPop(PetscHeap,PetscInt*,PetscInt*);
2952: PETSC_EXTERN PetscErrorCode PetscHeapPeek(PetscHeap,PetscInt*,PetscInt*);
2953: PETSC_EXTERN PetscErrorCode PetscHeapStash(PetscHeap,PetscInt,PetscInt);
2954: PETSC_EXTERN PetscErrorCode PetscHeapUnstash(PetscHeap);
2955: PETSC_EXTERN PetscErrorCode PetscHeapDestroy(PetscHeap*);
2956: PETSC_EXTERN PetscErrorCode PetscHeapView(PetscHeap,PetscViewer);
2958: /*S
2959: PetscSegBuffer - a segmented extendable buffer
2961: Level: developer
2963: .seealso: PetscSegBufferCreate(), PetscSegBufferGet(), PetscSegBufferExtract(), PetscSegBufferDestroy()
2964: S*/
2965: typedef struct _n_PetscSegBuffer *PetscSegBuffer;
2966: PETSC_EXTERN PetscErrorCode PetscSegBufferCreate(size_t,size_t,PetscSegBuffer*);
2967: PETSC_EXTERN PetscErrorCode PetscSegBufferDestroy(PetscSegBuffer*);
2968: PETSC_EXTERN PetscErrorCode PetscSegBufferGet(PetscSegBuffer,size_t,void*);
2969: PETSC_EXTERN PetscErrorCode PetscSegBufferExtractAlloc(PetscSegBuffer,void*);
2970: PETSC_EXTERN PetscErrorCode PetscSegBufferExtractTo(PetscSegBuffer,void*);
2971: PETSC_EXTERN PetscErrorCode PetscSegBufferExtractInPlace(PetscSegBuffer,void*);
2972: PETSC_EXTERN PetscErrorCode PetscSegBufferGetSize(PetscSegBuffer,size_t*);
2973: PETSC_EXTERN PetscErrorCode PetscSegBufferUnuse(PetscSegBuffer,size_t);
2976: * prevents the compiler from completely erasing the stub. This is called in inner loops so it has to be as fast as
2977: * possible. */
2978: PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,(size_t)count,(void**)slot);}
2980: typedef struct _n_PetscOptionsHelpPrinted *PetscOptionsHelpPrinted;
2981: extern PetscOptionsHelpPrinted PetscOptionsHelpPrintedSingleton;
2982: PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedDestroy(PetscOptionsHelpPrinted*);
2983: PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCreate(PetscOptionsHelpPrinted*);
2984: PETSC_EXTERN PetscErrorCode PetscOptionsHelpPrintedCheck(PetscOptionsHelpPrinted,const char*,const char*,PetscBool*);
2986: PETSC_EXTERN PetscSegBuffer PetscCitationsList;
2988: /*@C
2989: PetscCitationsRegister - Register a bibtex item to obtain credit for an implemented algorithm used in the code.
2991: Not Collective - only what is registered on rank 0 of PETSC_COMM_WORLD will be printed
2993: Input Parameters:
2994: + cite - the bibtex item, formated to displayed on multiple lines nicely
2995: - set - a boolean variable initially set to PETSC_FALSE; this is used to insure only a single registration of the citation
2997: Level: intermediate
2999: Options Database:
3000: . -citations [filename] - print out the bibtex entries for the given computation
3001: @*/
3002: PETSC_STATIC_INLINE PetscErrorCode PetscCitationsRegister(const char cit[],PetscBool *set)
3003: {
3004: size_t len;
3005: char *vstring;
3009: if (set && *set) return(0);
3010: PetscStrlen(cit,&len);
3011: PetscSegBufferGet(PetscCitationsList,len,&vstring);
3012: PetscMemcpy(vstring,cit,len);
3013: if (set) *set = PETSC_TRUE;
3014: return(0);
3015: }
3017: PETSC_EXTERN PetscErrorCode PetscURLShorten(const char[],char[],size_t);
3018: PETSC_EXTERN PetscErrorCode PetscGoogleDriveAuthorize(MPI_Comm,char[],char[],size_t);
3019: PETSC_EXTERN PetscErrorCode PetscGoogleDriveRefresh(MPI_Comm,const char[],char[],size_t);
3020: PETSC_EXTERN PetscErrorCode PetscGoogleDriveUpload(MPI_Comm,const char[],const char []);
3022: PETSC_EXTERN PetscErrorCode PetscBoxAuthorize(MPI_Comm,char[],char[],size_t);
3023: PETSC_EXTERN PetscErrorCode PetscBoxRefresh(MPI_Comm,const char[],char[],char[],size_t);
3025: PETSC_EXTERN PetscErrorCode PetscTextBelt(MPI_Comm,const char[],const char[],PetscBool*);
3026: PETSC_EXTERN PetscErrorCode PetscTellMyCell(MPI_Comm,const char[],const char[],PetscBool*);
3028: PETSC_EXTERN PetscErrorCode PetscPullJSONValue(const char[],const char[],char[],size_t,PetscBool*);
3029: PETSC_EXTERN PetscErrorCode PetscPushJSONValue(char[],const char[],const char[],size_t);
3032: #if defined(PETSC_USE_DEBUG)
3033: /*
3034: Verify that all processes in the communicator have called this from the same line of code
3035: */
3036: PETSC_EXTERN PetscErrorCode PetscAllreduceBarrierCheck(MPI_Comm,PetscMPIInt,int,const char*,const char *);
3038: /*MC
3039: MPIU_Allreduce - a PETSc replacement for MPI_Allreduce() that tries to determine if the call from all the MPI processes occur from the
3040: same place in the PETSc code. This helps to detect bugs where different MPI processes follow different code paths
3041: resulting in inconsistent and incorrect calls to MPI_Allreduce().
3043: Collective on MPI_Comm
3045: Synopsis:
3046: #include <petscsys.h>
3047: PetscErrorCode MPIU_Allreduce(void *indata,void *outdata,PetscMPIInt count,MPI_Datatype datatype, MPI_Op op, MPI_Comm comm);
3049: Input Parameters:
3050: + indata - pointer to the input data to be reduced
3051: . count - the number of MPI data items in indata and outdata
3052: . datatype - the MPI datatype, for example MPI_INT
3053: . op - the MPI operation, for example MPI_SUM
3054: - comm - the MPI communicator on which the operation occurs
3056: Output Parameter:
3057: . outdata - the reduced values
3059: Notes:
3060: In optimized mode this directly calls MPI_Allreduce()
3062: Level: developer
3064: .seealso: MPI_Allreduce()
3065: M*/
3066: #define MPIU_Allreduce(a,b,c,d,e,fcomm) (PetscAllreduceBarrierCheck(fcomm,c,__LINE__,PETSC_FUNCTION_NAME,__FILE__) || MPI_Allreduce(a,b,c,d,e,fcomm))
3067: #else
3068: #define MPIU_Allreduce(a,b,c,d,e,fcomm) MPI_Allreduce(a,b,c,d,e,fcomm)
3069: #endif
3071: #endif