Actual source code: ex82.c
petsc-3.8.4 2018-03-24
2: static char help[] = "Partition a tiny grid using hierarchical partitioning.\n\n";
4: /*T
5: Concepts: partitioning
6: Processors: 4
7: T*/
9: /*
10: Include "petscmat.h" so that we can use matrices. Note that this file
11: automatically includes:
12: petscsys.h - base PETSc routines petscvec.h - vectors
13: petscmat.h - matrices
14: petscis.h - index sets
15: petscviewer.h - viewers
16: */
17: #include <petscmat.h>
19: int main(int argc,char **args)
20: {
21: Mat A;
22: PetscErrorCode ierr;
23: PetscMPIInt rank,size;
24: PetscInt *ia,*ja;
25: MatPartitioning part;
26: IS is,isn,isrows;
27: IS coarseparts,fineparts;
28: MPI_Comm comm;
30: PetscInitialize(&argc,&args,(char*)0,help);if (ierr) return ierr;
31: comm = PETSC_COMM_WORLD;
32: MPI_Comm_size(comm,&size);
33: if (size != 4) SETERRQ(comm,1,"Must run with 4 processors");
34: MPI_Comm_rank(comm,&rank);
36: PetscMalloc1(5,&ia);
37: PetscMalloc1(16,&ja);
38: if (!rank) {
39: ja[0] = 1; ja[1] = 4; ja[2] = 0; ja[3] = 2; ja[4] = 5; ja[5] = 1; ja[6] = 3; ja[7] = 6;
40: ja[8] = 2; ja[9] = 7;
41: ia[0] = 0; ia[1] = 2; ia[2] = 5; ia[3] = 8; ia[4] = 10;
42: } else if (rank == 1) {
43: ja[0] = 0; ja[1] = 5; ja[2] = 8; ja[3] = 1; ja[4] = 4; ja[5] = 6; ja[6] = 9; ja[7] = 2;
44: ja[8] = 5; ja[9] = 7; ja[10] = 10; ja[11] = 3; ja[12] = 6; ja[13] = 11;
45: ia[0] = 0; ia[1] = 3; ia[2] = 7; ia[3] = 11; ia[4] = 14;
46: } else if (rank == 2) {
47: ja[0] = 4; ja[1] = 9; ja[2] = 12; ja[3] = 5; ja[4] = 8; ja[5] = 10; ja[6] = 13; ja[7] = 6;
48: ja[8] = 9; ja[9] = 11; ja[10] = 14; ja[11] = 7; ja[12] = 10; ja[13] = 15;
49: ia[0] = 0; ia[1] = 3; ia[2] = 7; ia[3] = 11; ia[4] = 14;
50: } else {
51: ja[0] = 8; ja[1] = 13; ja[2] = 9; ja[3] = 12; ja[4] = 14; ja[5] = 10; ja[6] = 13; ja[7] = 15;
52: ja[8] = 11; ja[9] = 14;
53: ia[0] = 0; ia[1] = 2; ia[2] = 5; ia[3] = 8; ia[4] = 10;
54: }
55: MatCreateMPIAdj(comm,4,16,ia,ja,NULL,&A);
56: MatView(A,PETSC_VIEWER_STDOUT_WORLD);
57: /*
58: Partition the graph of the matrix
59: */
60: MatPartitioningCreate(comm,&part);
61: MatPartitioningSetAdjacency(part,A);
62: MatPartitioningSetType(part,MATPARTITIONINGHIERARCH);
63: MatPartitioningHierarchicalSetNcoarseparts(part,2);
64: MatPartitioningHierarchicalSetNfineparts(part,2);
65: MatPartitioningSetFromOptions(part);
66: /* get new processor owner number of each vertex */
67: MatPartitioningApply(part,&is);
68: /* coarse parts */
69: MatPartitioningHierarchicalGetCoarseparts(part,&coarseparts);
70: ISView(coarseparts,PETSC_VIEWER_STDOUT_WORLD);
71: /* fine parts */
72: MatPartitioningHierarchicalGetFineparts(part,&fineparts);
73: ISView(fineparts,PETSC_VIEWER_STDOUT_WORLD);
74: /* partitioning */
75: ISView(is,PETSC_VIEWER_STDOUT_WORLD);
76: /* get new global number of each old global number */
77: ISPartitioningToNumbering(is,&isn);
78: ISView(isn,PETSC_VIEWER_STDOUT_WORLD);
79: ISBuildTwoSided(is,&isrows);
80: ISView(isrows,PETSC_VIEWER_STDOUT_WORLD);
81: ISDestroy(&is);
82: ISDestroy(&coarseparts);
83: ISDestroy(&fineparts);
84: ISDestroy(&isrows);
85: ISDestroy(&isn);
86: MatPartitioningDestroy(&part);
87: /*
88: Free work space. All PETSc objects should be destroyed when they
89: are no longer needed.
90: */
91: MatDestroy(&A);
92: PetscFinalize();
93: return ierr;
94: }