Actual source code: mpiaijsbaij.c
petsc-3.7.3 2016-08-01
2: #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> /*I "petscmat.h" I*/
3: #include <../src/mat/impls/aij/mpi/mpiaij.h>
4: #include <petsc/private/matimpl.h>
5: #include <petscmat.h>
9: PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPISBAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
10: {
11: PetscErrorCode ierr;
12: Mat M;
13: Mat_MPIAIJ *mpimat = (Mat_MPIAIJ*)A->data;
14: Mat_SeqAIJ *Aa = (Mat_SeqAIJ*)mpimat->A->data,*Ba = (Mat_SeqAIJ*)mpimat->B->data;
15: PetscInt *d_nnz,*o_nnz;
16: PetscInt i,j,nz;
17: PetscInt m,n,lm,ln;
18: PetscInt rstart,rend;
19: const PetscScalar *vwork;
20: const PetscInt *cwork;
23: if (!A->symmetric) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_USER,"Matrix must be symmetric. Call MatSetOption(mat,MAT_SYMMETRIC,PETSC_TRUE)");
24: MatGetSize(A,&m,&n);
25: MatGetLocalSize(A,&lm,&ln);
26: PetscMalloc2(lm,&d_nnz,lm,&o_nnz);
28: MatMarkDiagonal_SeqAIJ(mpimat->A);
29: for (i=0; i<lm; i++) {
30: d_nnz[i] = Aa->i[i+1] - Aa->diag[i];
31: o_nnz[i] = Ba->i[i+1] - Ba->i[i];
32: }
34: MatCreate(PetscObjectComm((PetscObject)A),&M);
35: MatSetSizes(M,lm,ln,m,n);
36: MatSetType(M,MATMPISBAIJ);
37: MatSeqSBAIJSetPreallocation(M,1,0,d_nnz);
38: MatMPISBAIJSetPreallocation(M,1,0,d_nnz,0,o_nnz);
40: PetscFree2(d_nnz,o_nnz);
42: MatGetOwnershipRange(A,&rstart,&rend);
43: for (i=rstart; i<rend; i++) {
44: MatGetRow(A,i,&nz,&cwork,&vwork);
45: j = 0;
46: while (cwork[j] < i) {
47: j++; nz--;
48: }
49: MatSetValues(M,1,&i,nz,cwork+j,vwork+j,INSERT_VALUES);
50: MatRestoreRow(A,i,&nz,&cwork,&vwork);
51: }
52: MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY);
53: MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY);
55: if (reuse == MAT_INPLACE_MATRIX) {
56: MatHeaderReplace(A,&M);
57: } else {
58: *newmat = M;
59: }
60: return(0);
61: }
62: /* contributed by Dahai Guo <dhguo@ncsa.uiuc.edu> April 2011 */
65: PETSC_INTERN PetscErrorCode MatConvert_MPIBAIJ_MPISBAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
66: {
67: PetscErrorCode ierr;
68: Mat M;
69: Mat_MPIBAIJ *mpimat = (Mat_MPIBAIJ*)A->data;
70: Mat_SeqBAIJ *Aa = (Mat_SeqBAIJ*)mpimat->A->data,*Ba = (Mat_SeqBAIJ*)mpimat->B->data;
71: PetscInt *d_nnz,*o_nnz;
72: PetscInt i,j,nz;
73: PetscInt m,n,lm,ln;
74: PetscInt rstart,rend;
75: const PetscScalar *vwork;
76: const PetscInt *cwork;
77: PetscInt bs = A->rmap->bs;
80: MatGetSize(A,&m,&n);
81: MatGetLocalSize(A,&lm,&ln);
82: PetscMalloc2(lm/bs,&d_nnz,lm/bs,&o_nnz);
84: MatMarkDiagonal_SeqBAIJ(mpimat->A);
85: for (i=0; i<lm/bs; i++) {
86: d_nnz[i] = Aa->i[i+1] - Aa->diag[i];
87: o_nnz[i] = Ba->i[i+1] - Ba->i[i];
88: }
90: MatCreate(PetscObjectComm((PetscObject)A),&M);
91: MatSetSizes(M,lm,ln,m,n);
92: MatSetType(M,MATMPISBAIJ);
93: MatSeqSBAIJSetPreallocation(M,bs,0,d_nnz);
94: MatMPISBAIJSetPreallocation(M,bs,0,d_nnz,0,o_nnz);
96: PetscFree2(d_nnz,o_nnz);
98: MatGetOwnershipRange(A,&rstart,&rend);
99: MatSetOption(M,MAT_IGNORE_LOWER_TRIANGULAR,PETSC_TRUE);
100: for (i=rstart; i<rend; i++) {
101: MatGetRow(A,i,&nz,&cwork,&vwork);
102: j = 0;
103: MatSetValues(M,1,&i,nz,cwork+j,vwork+j,INSERT_VALUES);
104: MatRestoreRow(A,i,&nz,&cwork,&vwork);
105: }
106: MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY);
107: MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY);
109: if (reuse == MAT_INPLACE_MATRIX) {
110: MatHeaderReplace(A,&M);
111: } else {
112: *newmat = M;
113: }
114: return(0);
115: }