Actual source code: petscviewerhdf5.h

petsc-3.5.4 2015-05-23
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  5: #include <petscviewer.h>

  7: #if defined(PETSC_HAVE_HDF5)

  9: #include <hdf5.h>
 10: PETSC_EXTERN PetscErrorCode PetscViewerHDF5GetFileId(PetscViewer,hid_t*);
 11: PETSC_EXTERN PetscErrorCode PetscViewerHDF5OpenGroup(PetscViewer, hid_t *, hid_t *);
 12: PETSC_EXTERN PetscErrorCode PetscViewerHDF5ReadSizes(PetscViewer, const char[], PetscInt *, PetscInt *);

 14: /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
 15: #define PETSC_HDF5_INT_MAX  2147483647
 16: #define PETSC_HDF5_INT_MIN -2147483647

 20: PETSC_STATIC_INLINE PetscErrorCode PetscHDF5IntCast(PetscInt a,hsize_t *b)
 21: {
 23: #if defined(PETSC_USE_64BIT_INDICES) && (PETSC_SIZEOF_SIZE_T == 4)
 24:   if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5");
 25: #endif
 26:   *b =  (hsize_t)(a);
 27:   return(0);
 28: }
 29: PETSC_EXTERN PetscErrorCode PetscDataTypeToHDF5DataType(PetscDataType,hid_t*);
 30: PETSC_EXTERN PetscErrorCode PetscHDF5DataTypeToPetscDataType(hid_t,PetscDataType*);

 32: #endif  /* defined(PETSC_HAVE_HDF5) */

 34: PETSC_EXTERN PetscErrorCode PetscViewerHDF5ReadAttribute(PetscViewer,const char[],const char[],PetscDataType,void*);
 35: PETSC_EXTERN PetscErrorCode PetscViewerHDF5WriteAttribute(PetscViewer,const char[],const char[],PetscDataType,const void*);
 36: PETSC_EXTERN PetscErrorCode PetscViewerHDF5HasAttribute(PetscViewer, const char[], const char[], PetscBool *);
 37: PETSC_EXTERN PetscErrorCode PetscViewerHDF5WriteSDS(PetscViewer,float *,int,int *,int);

 39: PETSC_EXTERN PetscErrorCode PetscViewerHDF5Open(MPI_Comm,const char[],PetscFileMode,PetscViewer*);
 40: PETSC_EXTERN PetscErrorCode PetscViewerHDF5PushGroup(PetscViewer,const char *);
 41: PETSC_EXTERN PetscErrorCode PetscViewerHDF5PopGroup(PetscViewer);
 42: PETSC_EXTERN PetscErrorCode PetscViewerHDF5GetGroup(PetscViewer, const char **);
 43: PETSC_EXTERN PetscErrorCode PetscViewerHDF5IncrementTimestep(PetscViewer);
 44: PETSC_EXTERN PetscErrorCode PetscViewerHDF5SetTimestep(PetscViewer,PetscInt);
 45: PETSC_EXTERN PetscErrorCode PetscViewerHDF5GetTimestep(PetscViewer,PetscInt*);

 47: /* Reset __FUNCT__ in case the user does not define it themselves */

 51: #endif