Actual source code: petscviewerhdf5.h
petsc-3.5.4 2015-05-23
5: #include <petscviewer.h>
7: #if defined(PETSC_HAVE_HDF5)
9: #include <hdf5.h>
10: PETSC_EXTERN PetscErrorCode PetscViewerHDF5GetFileId(PetscViewer,hid_t*);
11: PETSC_EXTERN PetscErrorCode PetscViewerHDF5OpenGroup(PetscViewer, hid_t *, hid_t *);
12: PETSC_EXTERN PetscErrorCode PetscViewerHDF5ReadSizes(PetscViewer, const char[], PetscInt *, PetscInt *);
14: /* On 32 bit systems HDF5 is limited by size of integer, because hsize_t is defined as size_t */
15: #define PETSC_HDF5_INT_MAX 2147483647
16: #define PETSC_HDF5_INT_MIN -2147483647
20: PETSC_STATIC_INLINE PetscErrorCode PetscHDF5IntCast(PetscInt a,hsize_t *b)
21: {
23: #if defined(PETSC_USE_64BIT_INDICES) && (PETSC_SIZEOF_SIZE_T == 4)
24: if ((a) > PETSC_HDF5_INT_MAX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Array too long for HDF5");
25: #endif
26: *b = (hsize_t)(a);
27: return(0);
28: }
29: PETSC_EXTERN PetscErrorCode PetscDataTypeToHDF5DataType(PetscDataType,hid_t*);
30: PETSC_EXTERN PetscErrorCode PetscHDF5DataTypeToPetscDataType(hid_t,PetscDataType*);
32: #endif /* defined(PETSC_HAVE_HDF5) */
34: PETSC_EXTERN PetscErrorCode PetscViewerHDF5ReadAttribute(PetscViewer,const char[],const char[],PetscDataType,void*);
35: PETSC_EXTERN PetscErrorCode PetscViewerHDF5WriteAttribute(PetscViewer,const char[],const char[],PetscDataType,const void*);
36: PETSC_EXTERN PetscErrorCode PetscViewerHDF5HasAttribute(PetscViewer, const char[], const char[], PetscBool *);
37: PETSC_EXTERN PetscErrorCode PetscViewerHDF5WriteSDS(PetscViewer,float *,int,int *,int);
39: PETSC_EXTERN PetscErrorCode PetscViewerHDF5Open(MPI_Comm,const char[],PetscFileMode,PetscViewer*);
40: PETSC_EXTERN PetscErrorCode PetscViewerHDF5PushGroup(PetscViewer,const char *);
41: PETSC_EXTERN PetscErrorCode PetscViewerHDF5PopGroup(PetscViewer);
42: PETSC_EXTERN PetscErrorCode PetscViewerHDF5GetGroup(PetscViewer, const char **);
43: PETSC_EXTERN PetscErrorCode PetscViewerHDF5IncrementTimestep(PetscViewer);
44: PETSC_EXTERN PetscErrorCode PetscViewerHDF5SetTimestep(PetscViewer,PetscInt);
45: PETSC_EXTERN PetscErrorCode PetscViewerHDF5GetTimestep(PetscViewer,PetscInt*);
47: /* Reset __FUNCT__ in case the user does not define it themselves */
51: #endif