Actual source code: matscalapack.c
1: #include <petsc/private/petscscalapack.h>
3: const char ScaLAPACKCitation[] = "@BOOK{scalapack-user-guide,\n"
4: " AUTHOR = {L. S. Blackford and J. Choi and A. Cleary and E. D'Azevedo and\n"
5: " J. Demmel and I. Dhillon and J. Dongarra and S. Hammarling and\n"
6: " G. Henry and A. Petitet and K. Stanley and D. Walker and R. C. Whaley},\n"
7: " TITLE = {Sca{LAPACK} Users' Guide},\n"
8: " PUBLISHER = {SIAM},\n"
9: " ADDRESS = {Philadelphia, PA},\n"
10: " YEAR = 1997\n"
11: "}\n";
12: static PetscBool ScaLAPACKCite = PETSC_FALSE;
14: #define DEFAULT_BLOCKSIZE 64
16: /*
17: The variable Petsc_ScaLAPACK_keyval is used to indicate an MPI attribute that
18: is attached to a communicator, in this case the attribute is a Mat_ScaLAPACK_Grid
19: */
20: static PetscMPIInt Petsc_ScaLAPACK_keyval = MPI_KEYVAL_INVALID;
22: static PetscErrorCode Petsc_ScaLAPACK_keyval_free(void)
23: {
24: PetscFunctionBegin;
25: PetscCall(PetscInfo(NULL, "Freeing Petsc_ScaLAPACK_keyval\n"));
26: PetscCallMPI(MPI_Comm_free_keyval(&Petsc_ScaLAPACK_keyval));
27: PetscFunctionReturn(PETSC_SUCCESS);
28: }
30: static PetscErrorCode MatView_ScaLAPACK(Mat A, PetscViewer viewer)
31: {
32: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
33: PetscBool iascii;
34: PetscViewerFormat format;
35: Mat Adense;
37: PetscFunctionBegin;
38: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
39: if (iascii) {
40: PetscCall(PetscViewerGetFormat(viewer, &format));
41: if (format == PETSC_VIEWER_ASCII_INFO || format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
42: PetscCall(PetscViewerASCIIPrintf(viewer, "block sizes: %d,%d\n", (int)a->mb, (int)a->nb));
43: PetscCall(PetscViewerASCIIPrintf(viewer, "grid height=%d, grid width=%d\n", (int)a->grid->nprow, (int)a->grid->npcol));
44: PetscCall(PetscViewerASCIIPrintf(viewer, "coordinates of process owning first row and column: (%d,%d)\n", (int)a->rsrc, (int)a->csrc));
45: PetscCall(PetscViewerASCIIPrintf(viewer, "dimension of largest local matrix: %d x %d\n", (int)a->locr, (int)a->locc));
46: PetscFunctionReturn(PETSC_SUCCESS);
47: } else if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) {
48: PetscFunctionReturn(PETSC_SUCCESS);
49: }
50: }
51: /* convert to dense format and call MatView() */
52: PetscCall(MatConvert(A, MATDENSE, MAT_INITIAL_MATRIX, &Adense));
53: PetscCall(MatView(Adense, viewer));
54: PetscCall(MatDestroy(&Adense));
55: PetscFunctionReturn(PETSC_SUCCESS);
56: }
58: static PetscErrorCode MatGetInfo_ScaLAPACK(Mat A, MatInfoType flag, MatInfo *info)
59: {
60: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
61: PetscLogDouble isend[2], irecv[2];
63: PetscFunctionBegin;
64: info->block_size = 1.0;
66: isend[0] = a->lld * a->locc; /* locally allocated */
67: isend[1] = a->locr * a->locc; /* used submatrix */
68: if (flag == MAT_LOCAL || flag == MAT_GLOBAL_MAX) {
69: info->nz_allocated = isend[0];
70: info->nz_used = isend[1];
71: } else if (flag == MAT_GLOBAL_MAX) {
72: PetscCall(MPIU_Allreduce(isend, irecv, 2, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A)));
73: info->nz_allocated = irecv[0];
74: info->nz_used = irecv[1];
75: } else if (flag == MAT_GLOBAL_SUM) {
76: PetscCall(MPIU_Allreduce(isend, irecv, 2, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A)));
77: info->nz_allocated = irecv[0];
78: info->nz_used = irecv[1];
79: }
81: info->nz_unneeded = 0;
82: info->assemblies = A->num_ass;
83: info->mallocs = 0;
84: info->memory = 0; /* REVIEW ME */
85: info->fill_ratio_given = 0;
86: info->fill_ratio_needed = 0;
87: info->factor_mallocs = 0;
88: PetscFunctionReturn(PETSC_SUCCESS);
89: }
91: static PetscErrorCode MatSetOption_ScaLAPACK(Mat A, MatOption op, PetscBool flg)
92: {
93: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
95: PetscFunctionBegin;
96: switch (op) {
97: case MAT_NEW_NONZERO_LOCATIONS:
98: case MAT_NEW_NONZERO_LOCATION_ERR:
99: case MAT_NEW_NONZERO_ALLOCATION_ERR:
100: case MAT_SYMMETRIC:
101: case MAT_SORTED_FULL:
102: case MAT_HERMITIAN:
103: break;
104: case MAT_ROW_ORIENTED:
105: a->roworiented = flg;
106: break;
107: default:
108: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Unsupported option %s", MatOptions[op]);
109: }
110: PetscFunctionReturn(PETSC_SUCCESS);
111: }
113: static PetscErrorCode MatSetValues_ScaLAPACK(Mat A, PetscInt nr, const PetscInt *rows, PetscInt nc, const PetscInt *cols, const PetscScalar *vals, InsertMode imode)
114: {
115: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
116: PetscInt i, j;
117: PetscBLASInt gridx, gcidx, lridx, lcidx, rsrc, csrc;
118: PetscBool roworiented = a->roworiented;
120: PetscFunctionBegin;
121: PetscCheck(imode == INSERT_VALUES || imode == ADD_VALUES, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for InsertMode %d", (int)imode);
122: for (i = 0; i < nr; i++) {
123: if (rows[i] < 0) continue;
124: PetscCall(PetscBLASIntCast(rows[i] + 1, &gridx));
125: for (j = 0; j < nc; j++) {
126: if (cols[j] < 0) continue;
127: PetscCall(PetscBLASIntCast(cols[j] + 1, &gcidx));
128: PetscCallBLAS("SCALAPACKinfog2l", SCALAPACKinfog2l_(&gridx, &gcidx, a->desc, &a->grid->nprow, &a->grid->npcol, &a->grid->myrow, &a->grid->mycol, &lridx, &lcidx, &rsrc, &csrc));
129: if (rsrc == a->grid->myrow && csrc == a->grid->mycol) {
130: if (roworiented) {
131: switch (imode) {
132: case INSERT_VALUES:
133: a->loc[lridx - 1 + (lcidx - 1) * a->lld] = vals[i * nc + j];
134: break;
135: default:
136: a->loc[lridx - 1 + (lcidx - 1) * a->lld] += vals[i * nc + j];
137: break;
138: }
139: } else {
140: switch (imode) {
141: case INSERT_VALUES:
142: a->loc[lridx - 1 + (lcidx - 1) * a->lld] = vals[i + j * nr];
143: break;
144: default:
145: a->loc[lridx - 1 + (lcidx - 1) * a->lld] += vals[i + j * nr];
146: break;
147: }
148: }
149: } else {
150: PetscCheck(!A->nooffprocentries, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Setting off process entry even though MatSetOption(,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) was set");
151: A->assembled = PETSC_FALSE;
152: PetscCall(MatStashValuesRow_Private(&A->stash, rows[i], 1, cols + j, roworiented ? vals + i * nc + j : vals + i + j * nr, (PetscBool)(imode == ADD_VALUES)));
153: }
154: }
155: }
156: PetscFunctionReturn(PETSC_SUCCESS);
157: }
159: static PetscErrorCode MatMultXXXYYY_ScaLAPACK(Mat A, PetscBool transpose, PetscScalar beta, const PetscScalar *x, PetscScalar *y)
160: {
161: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
162: PetscScalar *x2d, *y2d, alpha = 1.0;
163: const PetscInt *ranges;
164: PetscBLASInt xdesc[9], ydesc[9], x2desc[9], y2desc[9], mb, nb, lszx, lszy, zero = 0, one = 1, xlld, ylld, info;
166: PetscFunctionBegin;
167: if (transpose) {
168: /* create ScaLAPACK descriptors for vectors (1d block distribution) */
169: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
170: PetscCall(PetscBLASIntCast(ranges[1], &mb)); /* x block size */
171: xlld = PetscMax(1, A->rmap->n);
172: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(xdesc, &a->M, &one, &mb, &one, &zero, &zero, &a->grid->ictxcol, &xlld, &info));
173: PetscCheckScaLapackInfo("descinit", info);
174: PetscCall(PetscLayoutGetRanges(A->cmap, &ranges));
175: PetscCall(PetscBLASIntCast(ranges[1], &nb)); /* y block size */
176: ylld = 1;
177: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(ydesc, &one, &a->N, &one, &nb, &zero, &zero, &a->grid->ictxrow, &ylld, &info));
178: PetscCheckScaLapackInfo("descinit", info);
180: /* allocate 2d vectors */
181: lszx = SCALAPACKnumroc_(&a->M, &a->mb, &a->grid->myrow, &a->rsrc, &a->grid->nprow);
182: lszy = SCALAPACKnumroc_(&a->N, &a->nb, &a->grid->mycol, &a->csrc, &a->grid->npcol);
183: PetscCall(PetscMalloc2(lszx, &x2d, lszy, &y2d));
184: xlld = PetscMax(1, lszx);
186: /* create ScaLAPACK descriptors for vectors (2d block distribution) */
187: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(x2desc, &a->M, &one, &a->mb, &one, &zero, &zero, &a->grid->ictxt, &xlld, &info));
188: PetscCheckScaLapackInfo("descinit", info);
189: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(y2desc, &one, &a->N, &one, &a->nb, &zero, &zero, &a->grid->ictxt, &ylld, &info));
190: PetscCheckScaLapackInfo("descinit", info);
192: /* redistribute x as a column of a 2d matrix */
193: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, x, &one, &one, xdesc, x2d, &one, &one, x2desc, &a->grid->ictxcol));
195: /* redistribute y as a row of a 2d matrix */
196: if (beta != 0.0) PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&one, &a->N, y, &one, &one, ydesc, y2d, &one, &one, y2desc, &a->grid->ictxrow));
198: /* call PBLAS subroutine */
199: PetscCallBLAS("PBLASgemv", PBLASgemv_("T", &a->M, &a->N, &alpha, a->loc, &one, &one, a->desc, x2d, &one, &one, x2desc, &one, &beta, y2d, &one, &one, y2desc, &one));
201: /* redistribute y from a row of a 2d matrix */
202: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&one, &a->N, y2d, &one, &one, y2desc, y, &one, &one, ydesc, &a->grid->ictxrow));
204: } else { /* non-transpose */
206: /* create ScaLAPACK descriptors for vectors (1d block distribution) */
207: PetscCall(PetscLayoutGetRanges(A->cmap, &ranges));
208: PetscCall(PetscBLASIntCast(ranges[1], &nb)); /* x block size */
209: xlld = 1;
210: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(xdesc, &one, &a->N, &one, &nb, &zero, &zero, &a->grid->ictxrow, &xlld, &info));
211: PetscCheckScaLapackInfo("descinit", info);
212: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
213: PetscCall(PetscBLASIntCast(ranges[1], &mb)); /* y block size */
214: ylld = PetscMax(1, A->rmap->n);
215: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(ydesc, &a->M, &one, &mb, &one, &zero, &zero, &a->grid->ictxcol, &ylld, &info));
216: PetscCheckScaLapackInfo("descinit", info);
218: /* allocate 2d vectors */
219: lszy = SCALAPACKnumroc_(&a->M, &a->mb, &a->grid->myrow, &a->rsrc, &a->grid->nprow);
220: lszx = SCALAPACKnumroc_(&a->N, &a->nb, &a->grid->mycol, &a->csrc, &a->grid->npcol);
221: PetscCall(PetscMalloc2(lszx, &x2d, lszy, &y2d));
222: ylld = PetscMax(1, lszy);
224: /* create ScaLAPACK descriptors for vectors (2d block distribution) */
225: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(x2desc, &one, &a->N, &one, &a->nb, &zero, &zero, &a->grid->ictxt, &xlld, &info));
226: PetscCheckScaLapackInfo("descinit", info);
227: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(y2desc, &a->M, &one, &a->mb, &one, &zero, &zero, &a->grid->ictxt, &ylld, &info));
228: PetscCheckScaLapackInfo("descinit", info);
230: /* redistribute x as a row of a 2d matrix */
231: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&one, &a->N, x, &one, &one, xdesc, x2d, &one, &one, x2desc, &a->grid->ictxrow));
233: /* redistribute y as a column of a 2d matrix */
234: if (beta != 0.0) PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, y, &one, &one, ydesc, y2d, &one, &one, y2desc, &a->grid->ictxcol));
236: /* call PBLAS subroutine */
237: PetscCallBLAS("PBLASgemv", PBLASgemv_("N", &a->M, &a->N, &alpha, a->loc, &one, &one, a->desc, x2d, &one, &one, x2desc, &one, &beta, y2d, &one, &one, y2desc, &one));
239: /* redistribute y from a column of a 2d matrix */
240: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, y2d, &one, &one, y2desc, y, &one, &one, ydesc, &a->grid->ictxcol));
241: }
242: PetscCall(PetscFree2(x2d, y2d));
243: PetscFunctionReturn(PETSC_SUCCESS);
244: }
246: static PetscErrorCode MatMult_ScaLAPACK(Mat A, Vec x, Vec y)
247: {
248: const PetscScalar *xarray;
249: PetscScalar *yarray;
251: PetscFunctionBegin;
252: PetscCall(VecGetArrayRead(x, &xarray));
253: PetscCall(VecGetArray(y, &yarray));
254: PetscCall(MatMultXXXYYY_ScaLAPACK(A, PETSC_FALSE, 0.0, xarray, yarray));
255: PetscCall(VecRestoreArrayRead(x, &xarray));
256: PetscCall(VecRestoreArray(y, &yarray));
257: PetscFunctionReturn(PETSC_SUCCESS);
258: }
260: static PetscErrorCode MatMultTranspose_ScaLAPACK(Mat A, Vec x, Vec y)
261: {
262: const PetscScalar *xarray;
263: PetscScalar *yarray;
265: PetscFunctionBegin;
266: PetscCall(VecGetArrayRead(x, &xarray));
267: PetscCall(VecGetArray(y, &yarray));
268: PetscCall(MatMultXXXYYY_ScaLAPACK(A, PETSC_TRUE, 0.0, xarray, yarray));
269: PetscCall(VecRestoreArrayRead(x, &xarray));
270: PetscCall(VecRestoreArray(y, &yarray));
271: PetscFunctionReturn(PETSC_SUCCESS);
272: }
274: static PetscErrorCode MatMultAdd_ScaLAPACK(Mat A, Vec x, Vec y, Vec z)
275: {
276: const PetscScalar *xarray;
277: PetscScalar *zarray;
279: PetscFunctionBegin;
280: if (y != z) PetscCall(VecCopy(y, z));
281: PetscCall(VecGetArrayRead(x, &xarray));
282: PetscCall(VecGetArray(z, &zarray));
283: PetscCall(MatMultXXXYYY_ScaLAPACK(A, PETSC_FALSE, 1.0, xarray, zarray));
284: PetscCall(VecRestoreArrayRead(x, &xarray));
285: PetscCall(VecRestoreArray(z, &zarray));
286: PetscFunctionReturn(PETSC_SUCCESS);
287: }
289: static PetscErrorCode MatMultTransposeAdd_ScaLAPACK(Mat A, Vec x, Vec y, Vec z)
290: {
291: const PetscScalar *xarray;
292: PetscScalar *zarray;
294: PetscFunctionBegin;
295: if (y != z) PetscCall(VecCopy(y, z));
296: PetscCall(VecGetArrayRead(x, &xarray));
297: PetscCall(VecGetArray(z, &zarray));
298: PetscCall(MatMultXXXYYY_ScaLAPACK(A, PETSC_TRUE, 1.0, xarray, zarray));
299: PetscCall(VecRestoreArrayRead(x, &xarray));
300: PetscCall(VecRestoreArray(z, &zarray));
301: PetscFunctionReturn(PETSC_SUCCESS);
302: }
304: PetscErrorCode MatMatMultNumeric_ScaLAPACK(Mat A, Mat B, Mat C)
305: {
306: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
307: Mat_ScaLAPACK *b = (Mat_ScaLAPACK *)B->data;
308: Mat_ScaLAPACK *c = (Mat_ScaLAPACK *)C->data;
309: PetscScalar sone = 1.0, zero = 0.0;
310: PetscBLASInt one = 1;
312: PetscFunctionBegin;
313: PetscCallBLAS("PBLASgemm", PBLASgemm_("N", "N", &a->M, &b->N, &a->N, &sone, a->loc, &one, &one, a->desc, b->loc, &one, &one, b->desc, &zero, c->loc, &one, &one, c->desc));
314: C->assembled = PETSC_TRUE;
315: PetscFunctionReturn(PETSC_SUCCESS);
316: }
318: PetscErrorCode MatMatMultSymbolic_ScaLAPACK(Mat A, Mat B, PetscReal fill, Mat C)
319: {
320: PetscFunctionBegin;
321: PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, PETSC_DECIDE, PETSC_DECIDE));
322: PetscCall(MatSetType(C, MATSCALAPACK));
323: PetscCall(MatSetUp(C));
324: C->ops->matmultnumeric = MatMatMultNumeric_ScaLAPACK;
325: PetscFunctionReturn(PETSC_SUCCESS);
326: }
328: static PetscErrorCode MatMatTransposeMultNumeric_ScaLAPACK(Mat A, Mat B, Mat C)
329: {
330: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
331: Mat_ScaLAPACK *b = (Mat_ScaLAPACK *)B->data;
332: Mat_ScaLAPACK *c = (Mat_ScaLAPACK *)C->data;
333: PetscScalar sone = 1.0, zero = 0.0;
334: PetscBLASInt one = 1;
336: PetscFunctionBegin;
337: PetscCallBLAS("PBLASgemm", PBLASgemm_("N", "T", &a->M, &b->M, &a->N, &sone, a->loc, &one, &one, a->desc, b->loc, &one, &one, b->desc, &zero, c->loc, &one, &one, c->desc));
338: C->assembled = PETSC_TRUE;
339: PetscFunctionReturn(PETSC_SUCCESS);
340: }
342: static PetscErrorCode MatMatTransposeMultSymbolic_ScaLAPACK(Mat A, Mat B, PetscReal fill, Mat C)
343: {
344: PetscFunctionBegin;
345: PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, PETSC_DECIDE, PETSC_DECIDE));
346: PetscCall(MatSetType(C, MATSCALAPACK));
347: PetscCall(MatSetUp(C));
348: PetscFunctionReturn(PETSC_SUCCESS);
349: }
351: static PetscErrorCode MatProductSetFromOptions_ScaLAPACK_AB(Mat C)
352: {
353: PetscFunctionBegin;
354: C->ops->matmultsymbolic = MatMatMultSymbolic_ScaLAPACK;
355: C->ops->productsymbolic = MatProductSymbolic_AB;
356: PetscFunctionReturn(PETSC_SUCCESS);
357: }
359: static PetscErrorCode MatProductSetFromOptions_ScaLAPACK_ABt(Mat C)
360: {
361: PetscFunctionBegin;
362: C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_ScaLAPACK;
363: C->ops->productsymbolic = MatProductSymbolic_ABt;
364: PetscFunctionReturn(PETSC_SUCCESS);
365: }
367: PETSC_INTERN PetscErrorCode MatProductSetFromOptions_ScaLAPACK(Mat C)
368: {
369: Mat_Product *product = C->product;
371: PetscFunctionBegin;
372: switch (product->type) {
373: case MATPRODUCT_AB:
374: PetscCall(MatProductSetFromOptions_ScaLAPACK_AB(C));
375: break;
376: case MATPRODUCT_ABt:
377: PetscCall(MatProductSetFromOptions_ScaLAPACK_ABt(C));
378: break;
379: default:
380: SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_SUP, "MatProduct type %s is not supported for ScaLAPACK and ScaLAPACK matrices", MatProductTypes[product->type]);
381: }
382: PetscFunctionReturn(PETSC_SUCCESS);
383: }
385: static PetscErrorCode MatGetDiagonal_ScaLAPACK(Mat A, Vec D)
386: {
387: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
388: PetscScalar *darray, *d2d, v;
389: const PetscInt *ranges;
390: PetscBLASInt j, ddesc[9], d2desc[9], mb, nb, lszd, zero = 0, one = 1, dlld, info;
392: PetscFunctionBegin;
393: PetscCall(VecGetArray(D, &darray));
395: if (A->rmap->N <= A->cmap->N) { /* row version */
397: /* create ScaLAPACK descriptor for vector (1d block distribution) */
398: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
399: PetscCall(PetscBLASIntCast(ranges[1], &mb)); /* D block size */
400: dlld = PetscMax(1, A->rmap->n);
401: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(ddesc, &a->M, &one, &mb, &one, &zero, &zero, &a->grid->ictxcol, &dlld, &info));
402: PetscCheckScaLapackInfo("descinit", info);
404: /* allocate 2d vector */
405: lszd = SCALAPACKnumroc_(&a->M, &a->mb, &a->grid->myrow, &a->rsrc, &a->grid->nprow);
406: PetscCall(PetscCalloc1(lszd, &d2d));
407: dlld = PetscMax(1, lszd);
409: /* create ScaLAPACK descriptor for vector (2d block distribution) */
410: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(d2desc, &a->M, &one, &a->mb, &one, &zero, &zero, &a->grid->ictxt, &dlld, &info));
411: PetscCheckScaLapackInfo("descinit", info);
413: /* collect diagonal */
414: for (j = 1; j <= a->M; j++) {
415: PetscCallBLAS("SCALAPACKelget", SCALAPACKelget_("R", " ", &v, a->loc, &j, &j, a->desc));
416: PetscCallBLAS("SCALAPACKelset", SCALAPACKelset_(d2d, &j, &one, d2desc, &v));
417: }
419: /* redistribute d from a column of a 2d matrix */
420: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, d2d, &one, &one, d2desc, darray, &one, &one, ddesc, &a->grid->ictxcol));
421: PetscCall(PetscFree(d2d));
423: } else { /* column version */
425: /* create ScaLAPACK descriptor for vector (1d block distribution) */
426: PetscCall(PetscLayoutGetRanges(A->cmap, &ranges));
427: PetscCall(PetscBLASIntCast(ranges[1], &nb)); /* D block size */
428: dlld = 1;
429: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(ddesc, &one, &a->N, &one, &nb, &zero, &zero, &a->grid->ictxrow, &dlld, &info));
430: PetscCheckScaLapackInfo("descinit", info);
432: /* allocate 2d vector */
433: lszd = SCALAPACKnumroc_(&a->N, &a->nb, &a->grid->mycol, &a->csrc, &a->grid->npcol);
434: PetscCall(PetscCalloc1(lszd, &d2d));
436: /* create ScaLAPACK descriptor for vector (2d block distribution) */
437: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(d2desc, &one, &a->N, &one, &a->nb, &zero, &zero, &a->grid->ictxt, &dlld, &info));
438: PetscCheckScaLapackInfo("descinit", info);
440: /* collect diagonal */
441: for (j = 1; j <= a->N; j++) {
442: PetscCallBLAS("SCALAPACKelget", SCALAPACKelget_("C", " ", &v, a->loc, &j, &j, a->desc));
443: PetscCallBLAS("SCALAPACKelset", SCALAPACKelset_(d2d, &one, &j, d2desc, &v));
444: }
446: /* redistribute d from a row of a 2d matrix */
447: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&one, &a->N, d2d, &one, &one, d2desc, darray, &one, &one, ddesc, &a->grid->ictxrow));
448: PetscCall(PetscFree(d2d));
449: }
451: PetscCall(VecRestoreArray(D, &darray));
452: PetscCall(VecAssemblyBegin(D));
453: PetscCall(VecAssemblyEnd(D));
454: PetscFunctionReturn(PETSC_SUCCESS);
455: }
457: static PetscErrorCode MatDiagonalScale_ScaLAPACK(Mat A, Vec L, Vec R)
458: {
459: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
460: const PetscScalar *d;
461: const PetscInt *ranges;
462: PetscScalar *d2d;
463: PetscBLASInt i, j, ddesc[9], d2desc[9], mb, nb, lszd, zero = 0, one = 1, dlld, info;
465: PetscFunctionBegin;
466: if (R) {
467: PetscCall(VecGetArrayRead(R, &d));
468: /* create ScaLAPACK descriptor for vector (1d block distribution) */
469: PetscCall(PetscLayoutGetRanges(A->cmap, &ranges));
470: PetscCall(PetscBLASIntCast(ranges[1], &nb)); /* D block size */
471: dlld = 1;
472: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(ddesc, &one, &a->N, &one, &nb, &zero, &zero, &a->grid->ictxrow, &dlld, &info));
473: PetscCheckScaLapackInfo("descinit", info);
475: /* allocate 2d vector */
476: lszd = SCALAPACKnumroc_(&a->N, &a->nb, &a->grid->mycol, &a->csrc, &a->grid->npcol);
477: PetscCall(PetscCalloc1(lszd, &d2d));
479: /* create ScaLAPACK descriptor for vector (2d block distribution) */
480: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(d2desc, &one, &a->N, &one, &a->nb, &zero, &zero, &a->grid->ictxt, &dlld, &info));
481: PetscCheckScaLapackInfo("descinit", info);
483: /* redistribute d to a row of a 2d matrix */
484: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&one, &a->N, d, &one, &one, ddesc, d2d, &one, &one, d2desc, &a->grid->ictxrow));
486: /* broadcast along process columns */
487: if (!a->grid->myrow) Cdgebs2d(a->grid->ictxt, "C", " ", 1, lszd, d2d, dlld);
488: else Cdgebr2d(a->grid->ictxt, "C", " ", 1, lszd, d2d, dlld, 0, a->grid->mycol);
490: /* local scaling */
491: for (j = 0; j < a->locc; j++)
492: for (i = 0; i < a->locr; i++) a->loc[i + j * a->lld] *= d2d[j];
494: PetscCall(PetscFree(d2d));
495: PetscCall(VecRestoreArrayRead(R, &d));
496: }
497: if (L) {
498: PetscCall(VecGetArrayRead(L, &d));
499: /* create ScaLAPACK descriptor for vector (1d block distribution) */
500: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
501: PetscCall(PetscBLASIntCast(ranges[1], &mb)); /* D block size */
502: dlld = PetscMax(1, A->rmap->n);
503: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(ddesc, &a->M, &one, &mb, &one, &zero, &zero, &a->grid->ictxcol, &dlld, &info));
504: PetscCheckScaLapackInfo("descinit", info);
506: /* allocate 2d vector */
507: lszd = SCALAPACKnumroc_(&a->M, &a->mb, &a->grid->myrow, &a->rsrc, &a->grid->nprow);
508: PetscCall(PetscCalloc1(lszd, &d2d));
509: dlld = PetscMax(1, lszd);
511: /* create ScaLAPACK descriptor for vector (2d block distribution) */
512: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(d2desc, &a->M, &one, &a->mb, &one, &zero, &zero, &a->grid->ictxt, &dlld, &info));
513: PetscCheckScaLapackInfo("descinit", info);
515: /* redistribute d to a column of a 2d matrix */
516: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, d, &one, &one, ddesc, d2d, &one, &one, d2desc, &a->grid->ictxcol));
518: /* broadcast along process rows */
519: if (!a->grid->mycol) Cdgebs2d(a->grid->ictxt, "R", " ", lszd, 1, d2d, dlld);
520: else Cdgebr2d(a->grid->ictxt, "R", " ", lszd, 1, d2d, dlld, a->grid->myrow, 0);
522: /* local scaling */
523: for (i = 0; i < a->locr; i++)
524: for (j = 0; j < a->locc; j++) a->loc[i + j * a->lld] *= d2d[i];
526: PetscCall(PetscFree(d2d));
527: PetscCall(VecRestoreArrayRead(L, &d));
528: }
529: PetscFunctionReturn(PETSC_SUCCESS);
530: }
532: static PetscErrorCode MatMissingDiagonal_ScaLAPACK(Mat A, PetscBool *missing, PetscInt *d)
533: {
534: PetscFunctionBegin;
535: *missing = PETSC_FALSE;
536: PetscFunctionReturn(PETSC_SUCCESS);
537: }
539: static PetscErrorCode MatScale_ScaLAPACK(Mat X, PetscScalar a)
540: {
541: Mat_ScaLAPACK *x = (Mat_ScaLAPACK *)X->data;
542: PetscBLASInt n, one = 1;
544: PetscFunctionBegin;
545: n = x->lld * x->locc;
546: PetscCallBLAS("BLASscal", BLASscal_(&n, &a, x->loc, &one));
547: PetscFunctionReturn(PETSC_SUCCESS);
548: }
550: static PetscErrorCode MatShift_ScaLAPACK(Mat X, PetscScalar alpha)
551: {
552: Mat_ScaLAPACK *x = (Mat_ScaLAPACK *)X->data;
553: PetscBLASInt i, n;
554: PetscScalar v;
556: PetscFunctionBegin;
557: n = PetscMin(x->M, x->N);
558: for (i = 1; i <= n; i++) {
559: PetscCallBLAS("SCALAPACKelget", SCALAPACKelget_("-", " ", &v, x->loc, &i, &i, x->desc));
560: v += alpha;
561: PetscCallBLAS("SCALAPACKelset", SCALAPACKelset_(x->loc, &i, &i, x->desc, &v));
562: }
563: PetscFunctionReturn(PETSC_SUCCESS);
564: }
566: static PetscErrorCode MatAXPY_ScaLAPACK(Mat Y, PetscScalar alpha, Mat X, MatStructure str)
567: {
568: Mat_ScaLAPACK *x = (Mat_ScaLAPACK *)X->data;
569: Mat_ScaLAPACK *y = (Mat_ScaLAPACK *)Y->data;
570: PetscBLASInt one = 1;
571: PetscScalar beta = 1.0;
573: PetscFunctionBegin;
574: MatScaLAPACKCheckDistribution(Y, 1, X, 3);
575: PetscCallBLAS("SCALAPACKmatadd", SCALAPACKmatadd_(&x->M, &x->N, &alpha, x->loc, &one, &one, x->desc, &beta, y->loc, &one, &one, y->desc));
576: PetscCall(PetscObjectStateIncrease((PetscObject)Y));
577: PetscFunctionReturn(PETSC_SUCCESS);
578: }
580: static PetscErrorCode MatCopy_ScaLAPACK(Mat A, Mat B, MatStructure str)
581: {
582: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
583: Mat_ScaLAPACK *b = (Mat_ScaLAPACK *)B->data;
585: PetscFunctionBegin;
586: PetscCall(PetscArraycpy(b->loc, a->loc, a->lld * a->locc));
587: PetscCall(PetscObjectStateIncrease((PetscObject)B));
588: PetscFunctionReturn(PETSC_SUCCESS);
589: }
591: static PetscErrorCode MatDuplicate_ScaLAPACK(Mat A, MatDuplicateOption op, Mat *B)
592: {
593: Mat Bs;
594: MPI_Comm comm;
595: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data, *b;
597: PetscFunctionBegin;
598: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
599: PetscCall(MatCreate(comm, &Bs));
600: PetscCall(MatSetSizes(Bs, A->rmap->n, A->cmap->n, PETSC_DECIDE, PETSC_DECIDE));
601: PetscCall(MatSetType(Bs, MATSCALAPACK));
602: b = (Mat_ScaLAPACK *)Bs->data;
603: b->M = a->M;
604: b->N = a->N;
605: b->mb = a->mb;
606: b->nb = a->nb;
607: b->rsrc = a->rsrc;
608: b->csrc = a->csrc;
609: PetscCall(MatSetUp(Bs));
610: *B = Bs;
611: if (op == MAT_COPY_VALUES) PetscCall(PetscArraycpy(b->loc, a->loc, a->lld * a->locc));
612: Bs->assembled = PETSC_TRUE;
613: PetscFunctionReturn(PETSC_SUCCESS);
614: }
616: static PetscErrorCode MatTranspose_ScaLAPACK(Mat A, MatReuse reuse, Mat *B)
617: {
618: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data, *b;
619: Mat Bs = *B;
620: PetscBLASInt one = 1;
621: PetscScalar sone = 1.0, zero = 0.0;
622: #if defined(PETSC_USE_COMPLEX)
623: PetscInt i, j;
624: #endif
626: PetscFunctionBegin;
627: if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *B));
628: PetscCheck(reuse == MAT_INITIAL_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Only MAT_INITIAL_MATRIX supported");
629: PetscCall(MatCreateScaLAPACK(PetscObjectComm((PetscObject)A), a->nb, a->mb, a->N, a->M, a->csrc, a->rsrc, &Bs));
630: *B = Bs;
631: b = (Mat_ScaLAPACK *)Bs->data;
632: PetscCallBLAS("PBLAStran", PBLAStran_(&a->N, &a->M, &sone, a->loc, &one, &one, a->desc, &zero, b->loc, &one, &one, b->desc));
633: #if defined(PETSC_USE_COMPLEX)
634: /* undo conjugation */
635: for (i = 0; i < b->locr; i++)
636: for (j = 0; j < b->locc; j++) b->loc[i + j * b->lld] = PetscConj(b->loc[i + j * b->lld]);
637: #endif
638: Bs->assembled = PETSC_TRUE;
639: PetscFunctionReturn(PETSC_SUCCESS);
640: }
642: static PetscErrorCode MatConjugate_ScaLAPACK(Mat A)
643: {
644: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
645: PetscInt i, j;
647: PetscFunctionBegin;
648: for (i = 0; i < a->locr; i++)
649: for (j = 0; j < a->locc; j++) a->loc[i + j * a->lld] = PetscConj(a->loc[i + j * a->lld]);
650: PetscFunctionReturn(PETSC_SUCCESS);
651: }
653: static PetscErrorCode MatHermitianTranspose_ScaLAPACK(Mat A, MatReuse reuse, Mat *B)
654: {
655: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data, *b;
656: Mat Bs = *B;
657: PetscBLASInt one = 1;
658: PetscScalar sone = 1.0, zero = 0.0;
660: PetscFunctionBegin;
661: PetscCheck(reuse == MAT_INITIAL_MATRIX, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Only MAT_INITIAL_MATRIX supported");
662: PetscCall(MatCreateScaLAPACK(PetscObjectComm((PetscObject)A), a->nb, a->mb, a->N, a->M, a->csrc, a->rsrc, &Bs));
663: *B = Bs;
664: b = (Mat_ScaLAPACK *)Bs->data;
665: PetscCallBLAS("PBLAStran", PBLAStran_(&a->N, &a->M, &sone, a->loc, &one, &one, a->desc, &zero, b->loc, &one, &one, b->desc));
666: Bs->assembled = PETSC_TRUE;
667: PetscFunctionReturn(PETSC_SUCCESS);
668: }
670: static PetscErrorCode MatSolve_ScaLAPACK(Mat A, Vec B, Vec X)
671: {
672: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
673: PetscScalar *x, *x2d;
674: const PetscInt *ranges;
675: PetscBLASInt xdesc[9], x2desc[9], mb, lszx, zero = 0, one = 1, xlld, nrhs = 1, info;
677: PetscFunctionBegin;
678: PetscCall(VecCopy(B, X));
679: PetscCall(VecGetArray(X, &x));
681: /* create ScaLAPACK descriptor for a vector (1d block distribution) */
682: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
683: PetscCall(PetscBLASIntCast(ranges[1], &mb)); /* x block size */
684: xlld = PetscMax(1, A->rmap->n);
685: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(xdesc, &a->M, &one, &mb, &one, &zero, &zero, &a->grid->ictxcol, &xlld, &info));
686: PetscCheckScaLapackInfo("descinit", info);
688: /* allocate 2d vector */
689: lszx = SCALAPACKnumroc_(&a->M, &a->mb, &a->grid->myrow, &a->rsrc, &a->grid->nprow);
690: PetscCall(PetscMalloc1(lszx, &x2d));
691: xlld = PetscMax(1, lszx);
693: /* create ScaLAPACK descriptor for a vector (2d block distribution) */
694: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(x2desc, &a->M, &one, &a->mb, &one, &zero, &zero, &a->grid->ictxt, &xlld, &info));
695: PetscCheckScaLapackInfo("descinit", info);
697: /* redistribute x as a column of a 2d matrix */
698: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, x, &one, &one, xdesc, x2d, &one, &one, x2desc, &a->grid->ictxcol));
700: /* call ScaLAPACK subroutine */
701: switch (A->factortype) {
702: case MAT_FACTOR_LU:
703: PetscCallBLAS("SCALAPACKgetrs", SCALAPACKgetrs_("N", &a->M, &nrhs, a->loc, &one, &one, a->desc, a->pivots, x2d, &one, &one, x2desc, &info));
704: PetscCheckScaLapackInfo("getrs", info);
705: break;
706: case MAT_FACTOR_CHOLESKY:
707: PetscCallBLAS("SCALAPACKpotrs", SCALAPACKpotrs_("L", &a->M, &nrhs, a->loc, &one, &one, a->desc, x2d, &one, &one, x2desc, &info));
708: PetscCheckScaLapackInfo("potrs", info);
709: break;
710: default:
711: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Unfactored Matrix or Unsupported MatFactorType");
712: }
714: /* redistribute x from a column of a 2d matrix */
715: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &one, x2d, &one, &one, x2desc, x, &one, &one, xdesc, &a->grid->ictxcol));
717: PetscCall(PetscFree(x2d));
718: PetscCall(VecRestoreArray(X, &x));
719: PetscFunctionReturn(PETSC_SUCCESS);
720: }
722: static PetscErrorCode MatSolveAdd_ScaLAPACK(Mat A, Vec B, Vec Y, Vec X)
723: {
724: PetscFunctionBegin;
725: PetscCall(MatSolve_ScaLAPACK(A, B, X));
726: PetscCall(VecAXPY(X, 1, Y));
727: PetscFunctionReturn(PETSC_SUCCESS);
728: }
730: static PetscErrorCode MatMatSolve_ScaLAPACK(Mat A, Mat B, Mat X)
731: {
732: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data, *b, *x;
733: PetscBool flg1, flg2;
734: PetscBLASInt one = 1, info;
736: PetscFunctionBegin;
737: PetscCall(PetscObjectTypeCompare((PetscObject)B, MATSCALAPACK, &flg1));
738: PetscCall(PetscObjectTypeCompare((PetscObject)X, MATSCALAPACK, &flg2));
739: PetscCheck((flg1 && flg2), PETSC_COMM_SELF, PETSC_ERR_SUP, "Both B and X must be of type MATSCALAPACK");
740: MatScaLAPACKCheckDistribution(B, 1, X, 2);
741: b = (Mat_ScaLAPACK *)B->data;
742: x = (Mat_ScaLAPACK *)X->data;
743: PetscCall(PetscArraycpy(x->loc, b->loc, b->lld * b->locc));
745: switch (A->factortype) {
746: case MAT_FACTOR_LU:
747: PetscCallBLAS("SCALAPACKgetrs", SCALAPACKgetrs_("N", &a->M, &x->N, a->loc, &one, &one, a->desc, a->pivots, x->loc, &one, &one, x->desc, &info));
748: PetscCheckScaLapackInfo("getrs", info);
749: break;
750: case MAT_FACTOR_CHOLESKY:
751: PetscCallBLAS("SCALAPACKpotrs", SCALAPACKpotrs_("L", &a->M, &x->N, a->loc, &one, &one, a->desc, x->loc, &one, &one, x->desc, &info));
752: PetscCheckScaLapackInfo("potrs", info);
753: break;
754: default:
755: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Unfactored Matrix or Unsupported MatFactorType");
756: }
757: PetscFunctionReturn(PETSC_SUCCESS);
758: }
760: static PetscErrorCode MatLUFactor_ScaLAPACK(Mat A, IS row, IS col, const MatFactorInfo *factorinfo)
761: {
762: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
763: PetscBLASInt one = 1, info;
765: PetscFunctionBegin;
766: if (!a->pivots) PetscCall(PetscMalloc1(a->locr + a->mb, &a->pivots));
767: PetscCallBLAS("SCALAPACKgetrf", SCALAPACKgetrf_(&a->M, &a->N, a->loc, &one, &one, a->desc, a->pivots, &info));
768: PetscCheckScaLapackInfo("getrf", info);
769: A->factortype = MAT_FACTOR_LU;
770: A->assembled = PETSC_TRUE;
772: PetscCall(PetscFree(A->solvertype));
773: PetscCall(PetscStrallocpy(MATSOLVERSCALAPACK, &A->solvertype));
774: PetscFunctionReturn(PETSC_SUCCESS);
775: }
777: static PetscErrorCode MatLUFactorNumeric_ScaLAPACK(Mat F, Mat A, const MatFactorInfo *info)
778: {
779: PetscFunctionBegin;
780: PetscCall(MatCopy(A, F, SAME_NONZERO_PATTERN));
781: PetscCall(MatLUFactor_ScaLAPACK(F, 0, 0, info));
782: PetscFunctionReturn(PETSC_SUCCESS);
783: }
785: static PetscErrorCode MatLUFactorSymbolic_ScaLAPACK(Mat F, Mat A, IS r, IS c, const MatFactorInfo *info)
786: {
787: PetscFunctionBegin;
788: /* F is created and allocated by MatGetFactor_scalapack_petsc(), skip this routine. */
789: PetscFunctionReturn(PETSC_SUCCESS);
790: }
792: static PetscErrorCode MatCholeskyFactor_ScaLAPACK(Mat A, IS perm, const MatFactorInfo *factorinfo)
793: {
794: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
795: PetscBLASInt one = 1, info;
797: PetscFunctionBegin;
798: PetscCallBLAS("SCALAPACKpotrf", SCALAPACKpotrf_("L", &a->M, a->loc, &one, &one, a->desc, &info));
799: PetscCheckScaLapackInfo("potrf", info);
800: A->factortype = MAT_FACTOR_CHOLESKY;
801: A->assembled = PETSC_TRUE;
803: PetscCall(PetscFree(A->solvertype));
804: PetscCall(PetscStrallocpy(MATSOLVERSCALAPACK, &A->solvertype));
805: PetscFunctionReturn(PETSC_SUCCESS);
806: }
808: static PetscErrorCode MatCholeskyFactorNumeric_ScaLAPACK(Mat F, Mat A, const MatFactorInfo *info)
809: {
810: PetscFunctionBegin;
811: PetscCall(MatCopy(A, F, SAME_NONZERO_PATTERN));
812: PetscCall(MatCholeskyFactor_ScaLAPACK(F, 0, info));
813: PetscFunctionReturn(PETSC_SUCCESS);
814: }
816: static PetscErrorCode MatCholeskyFactorSymbolic_ScaLAPACK(Mat F, Mat A, IS perm, const MatFactorInfo *info)
817: {
818: PetscFunctionBegin;
819: /* F is created and allocated by MatGetFactor_scalapack_petsc(), skip this routine. */
820: PetscFunctionReturn(PETSC_SUCCESS);
821: }
823: static PetscErrorCode MatFactorGetSolverType_scalapack_scalapack(Mat A, MatSolverType *type)
824: {
825: PetscFunctionBegin;
826: *type = MATSOLVERSCALAPACK;
827: PetscFunctionReturn(PETSC_SUCCESS);
828: }
830: static PetscErrorCode MatGetFactor_scalapack_scalapack(Mat A, MatFactorType ftype, Mat *F)
831: {
832: Mat B;
833: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
835: PetscFunctionBegin;
836: /* Create the factorization matrix */
837: PetscCall(MatCreateScaLAPACK(PetscObjectComm((PetscObject)A), a->mb, a->nb, a->M, a->N, a->rsrc, a->csrc, &B));
838: B->trivialsymbolic = PETSC_TRUE;
839: B->factortype = ftype;
840: PetscCall(PetscFree(B->solvertype));
841: PetscCall(PetscStrallocpy(MATSOLVERSCALAPACK, &B->solvertype));
843: PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_scalapack_scalapack));
844: *F = B;
845: PetscFunctionReturn(PETSC_SUCCESS);
846: }
848: PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_ScaLAPACK(void)
849: {
850: PetscFunctionBegin;
851: PetscCall(MatSolverTypeRegister(MATSOLVERSCALAPACK, MATSCALAPACK, MAT_FACTOR_LU, MatGetFactor_scalapack_scalapack));
852: PetscCall(MatSolverTypeRegister(MATSOLVERSCALAPACK, MATSCALAPACK, MAT_FACTOR_CHOLESKY, MatGetFactor_scalapack_scalapack));
853: PetscFunctionReturn(PETSC_SUCCESS);
854: }
856: static PetscErrorCode MatNorm_ScaLAPACK(Mat A, NormType type, PetscReal *nrm)
857: {
858: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
859: PetscBLASInt one = 1, lwork = 0;
860: const char *ntype;
861: PetscScalar *work = NULL, dummy;
863: PetscFunctionBegin;
864: switch (type) {
865: case NORM_1:
866: ntype = "1";
867: lwork = PetscMax(a->locr, a->locc);
868: break;
869: case NORM_FROBENIUS:
870: ntype = "F";
871: work = &dummy;
872: break;
873: case NORM_INFINITY:
874: ntype = "I";
875: lwork = PetscMax(a->locr, a->locc);
876: break;
877: default:
878: SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Unsupported norm type");
879: }
880: if (lwork) PetscCall(PetscMalloc1(lwork, &work));
881: *nrm = SCALAPACKlange_(ntype, &a->M, &a->N, a->loc, &one, &one, a->desc, work);
882: if (lwork) PetscCall(PetscFree(work));
883: PetscFunctionReturn(PETSC_SUCCESS);
884: }
886: static PetscErrorCode MatZeroEntries_ScaLAPACK(Mat A)
887: {
888: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
890: PetscFunctionBegin;
891: PetscCall(PetscArrayzero(a->loc, a->lld * a->locc));
892: PetscFunctionReturn(PETSC_SUCCESS);
893: }
895: static PetscErrorCode MatGetOwnershipIS_ScaLAPACK(Mat A, IS *rows, IS *cols)
896: {
897: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
898: PetscInt i, n, nb, isrc, nproc, iproc, *idx;
900: PetscFunctionBegin;
901: if (rows) {
902: n = a->locr;
903: nb = a->mb;
904: isrc = a->rsrc;
905: nproc = a->grid->nprow;
906: iproc = a->grid->myrow;
907: PetscCall(PetscMalloc1(n, &idx));
908: for (i = 0; i < n; i++) idx[i] = nproc * nb * (i / nb) + i % nb + ((nproc + iproc - isrc) % nproc) * nb;
909: PetscCall(ISCreateGeneral(PETSC_COMM_SELF, n, idx, PETSC_OWN_POINTER, rows));
910: }
911: if (cols) {
912: n = a->locc;
913: nb = a->nb;
914: isrc = a->csrc;
915: nproc = a->grid->npcol;
916: iproc = a->grid->mycol;
917: PetscCall(PetscMalloc1(n, &idx));
918: for (i = 0; i < n; i++) idx[i] = nproc * nb * (i / nb) + i % nb + ((nproc + iproc - isrc) % nproc) * nb;
919: PetscCall(ISCreateGeneral(PETSC_COMM_SELF, n, idx, PETSC_OWN_POINTER, cols));
920: }
921: PetscFunctionReturn(PETSC_SUCCESS);
922: }
924: static PetscErrorCode MatConvert_ScaLAPACK_Dense(Mat A, MatType newtype, MatReuse reuse, Mat *B)
925: {
926: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
927: Mat Bmpi;
928: MPI_Comm comm;
929: PetscInt i, M = A->rmap->N, N = A->cmap->N, m, n, rstart, rend, nz, ldb;
930: const PetscInt *ranges, *branges, *cwork;
931: const PetscScalar *vwork;
932: PetscBLASInt bdesc[9], bmb, zero = 0, one = 1, lld, info;
933: PetscScalar *barray;
934: PetscBool differ = PETSC_FALSE;
935: PetscMPIInt size;
937: PetscFunctionBegin;
938: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
939: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
941: if (reuse == MAT_REUSE_MATRIX) { /* check if local sizes differ in A and B */
942: PetscCallMPI(MPI_Comm_size(comm, &size));
943: PetscCall(PetscLayoutGetRanges((*B)->rmap, &branges));
944: for (i = 0; i < size; i++)
945: if (ranges[i + 1] != branges[i + 1]) {
946: differ = PETSC_TRUE;
947: break;
948: }
949: }
951: if (reuse == MAT_REUSE_MATRIX && differ) { /* special case, use auxiliary dense matrix */
952: PetscCall(MatCreate(comm, &Bmpi));
953: m = PETSC_DECIDE;
954: PetscCall(PetscSplitOwnershipEqual(comm, &m, &M));
955: n = PETSC_DECIDE;
956: PetscCall(PetscSplitOwnershipEqual(comm, &n, &N));
957: PetscCall(MatSetSizes(Bmpi, m, n, M, N));
958: PetscCall(MatSetType(Bmpi, MATDENSE));
959: PetscCall(MatSetUp(Bmpi));
961: /* create ScaLAPACK descriptor for B (1d block distribution) */
962: PetscCall(PetscBLASIntCast(ranges[1], &bmb)); /* row block size */
963: PetscCall(MatDenseGetLDA(Bmpi, &ldb));
964: lld = PetscMax(ldb, 1); /* local leading dimension */
965: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(bdesc, &a->M, &a->N, &bmb, &a->N, &zero, &zero, &a->grid->ictxcol, &lld, &info));
966: PetscCheckScaLapackInfo("descinit", info);
968: /* redistribute matrix */
969: PetscCall(MatDenseGetArray(Bmpi, &barray));
970: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &a->N, a->loc, &one, &one, a->desc, barray, &one, &one, bdesc, &a->grid->ictxcol));
971: PetscCall(MatDenseRestoreArray(Bmpi, &barray));
972: PetscCall(MatAssemblyBegin(Bmpi, MAT_FINAL_ASSEMBLY));
973: PetscCall(MatAssemblyEnd(Bmpi, MAT_FINAL_ASSEMBLY));
975: /* transfer rows of auxiliary matrix to the final matrix B */
976: PetscCall(MatGetOwnershipRange(Bmpi, &rstart, &rend));
977: for (i = rstart; i < rend; i++) {
978: PetscCall(MatGetRow(Bmpi, i, &nz, &cwork, &vwork));
979: PetscCall(MatSetValues(*B, 1, &i, nz, cwork, vwork, INSERT_VALUES));
980: PetscCall(MatRestoreRow(Bmpi, i, &nz, &cwork, &vwork));
981: }
982: PetscCall(MatAssemblyBegin(*B, MAT_FINAL_ASSEMBLY));
983: PetscCall(MatAssemblyEnd(*B, MAT_FINAL_ASSEMBLY));
984: PetscCall(MatDestroy(&Bmpi));
986: } else { /* normal cases */
988: if (reuse == MAT_REUSE_MATRIX) Bmpi = *B;
989: else {
990: PetscCall(MatCreate(comm, &Bmpi));
991: m = PETSC_DECIDE;
992: PetscCall(PetscSplitOwnershipEqual(comm, &m, &M));
993: n = PETSC_DECIDE;
994: PetscCall(PetscSplitOwnershipEqual(comm, &n, &N));
995: PetscCall(MatSetSizes(Bmpi, m, n, M, N));
996: PetscCall(MatSetType(Bmpi, MATDENSE));
997: PetscCall(MatSetUp(Bmpi));
998: }
1000: /* create ScaLAPACK descriptor for B (1d block distribution) */
1001: PetscCall(PetscBLASIntCast(ranges[1], &bmb)); /* row block size */
1002: PetscCall(MatDenseGetLDA(Bmpi, &ldb));
1003: lld = PetscMax(ldb, 1); /* local leading dimension */
1004: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(bdesc, &a->M, &a->N, &bmb, &a->N, &zero, &zero, &a->grid->ictxcol, &lld, &info));
1005: PetscCheckScaLapackInfo("descinit", info);
1007: /* redistribute matrix */
1008: PetscCall(MatDenseGetArray(Bmpi, &barray));
1009: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&a->M, &a->N, a->loc, &one, &one, a->desc, barray, &one, &one, bdesc, &a->grid->ictxcol));
1010: PetscCall(MatDenseRestoreArray(Bmpi, &barray));
1012: PetscCall(MatAssemblyBegin(Bmpi, MAT_FINAL_ASSEMBLY));
1013: PetscCall(MatAssemblyEnd(Bmpi, MAT_FINAL_ASSEMBLY));
1014: if (reuse == MAT_INPLACE_MATRIX) {
1015: PetscCall(MatHeaderReplace(A, &Bmpi));
1016: } else *B = Bmpi;
1017: }
1018: PetscFunctionReturn(PETSC_SUCCESS);
1019: }
1021: static inline PetscErrorCode MatScaLAPACKCheckLayout(PetscLayout map, PetscBool *correct)
1022: {
1023: const PetscInt *ranges;
1024: PetscMPIInt size;
1025: PetscInt i, n;
1027: PetscFunctionBegin;
1028: *correct = PETSC_TRUE;
1029: PetscCallMPI(MPI_Comm_size(map->comm, &size));
1030: if (size > 1) {
1031: PetscCall(PetscLayoutGetRanges(map, &ranges));
1032: n = ranges[1] - ranges[0];
1033: for (i = 1; i < size; i++)
1034: if (ranges[i + 1] - ranges[i] != n) break;
1035: *correct = (PetscBool)(i == size || (i == size - 1 && ranges[i + 1] - ranges[i] <= n));
1036: }
1037: PetscFunctionReturn(PETSC_SUCCESS);
1038: }
1040: PETSC_INTERN PetscErrorCode MatConvert_Dense_ScaLAPACK(Mat A, MatType newtype, MatReuse reuse, Mat *B)
1041: {
1042: Mat_ScaLAPACK *b;
1043: Mat Bmpi;
1044: MPI_Comm comm;
1045: PetscInt M = A->rmap->N, N = A->cmap->N, m, n;
1046: const PetscInt *ranges, *rows, *cols;
1047: PetscBLASInt adesc[9], amb, zero = 0, one = 1, lld, info;
1048: const PetscScalar *aarray;
1049: IS ir, ic;
1050: PetscInt lda;
1051: PetscBool flg;
1053: PetscFunctionBegin;
1054: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
1056: if (reuse == MAT_REUSE_MATRIX) Bmpi = *B;
1057: else {
1058: PetscCall(MatCreate(comm, &Bmpi));
1059: m = PETSC_DECIDE;
1060: PetscCall(PetscSplitOwnershipEqual(comm, &m, &M));
1061: n = PETSC_DECIDE;
1062: PetscCall(PetscSplitOwnershipEqual(comm, &n, &N));
1063: PetscCall(MatSetSizes(Bmpi, m, n, M, N));
1064: PetscCall(MatSetType(Bmpi, MATSCALAPACK));
1065: PetscCall(MatSetUp(Bmpi));
1066: }
1067: b = (Mat_ScaLAPACK *)Bmpi->data;
1069: PetscCall(MatDenseGetLDA(A, &lda));
1070: PetscCall(MatDenseGetArrayRead(A, &aarray));
1071: PetscCall(MatScaLAPACKCheckLayout(A->rmap, &flg));
1072: if (flg) PetscCall(MatScaLAPACKCheckLayout(A->cmap, &flg));
1073: if (flg) { /* if the input Mat has a ScaLAPACK-compatible layout, use ScaLAPACK for the redistribution */
1074: /* create ScaLAPACK descriptor for A (1d block distribution) */
1075: PetscCall(PetscLayoutGetRanges(A->rmap, &ranges));
1076: PetscCall(PetscBLASIntCast(ranges[1], &amb)); /* row block size */
1077: lld = PetscMax(lda, 1); /* local leading dimension */
1078: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(adesc, &b->M, &b->N, &amb, &b->N, &zero, &zero, &b->grid->ictxcol, &lld, &info));
1079: PetscCheckScaLapackInfo("descinit", info);
1081: /* redistribute matrix */
1082: PetscCallBLAS("SCALAPACKgemr2d", SCALAPACKgemr2d_(&b->M, &b->N, aarray, &one, &one, adesc, b->loc, &one, &one, b->desc, &b->grid->ictxcol));
1083: Bmpi->nooffprocentries = PETSC_TRUE;
1084: } else { /* if the input Mat has a ScaLAPACK-incompatible layout, redistribute via MatSetValues() */
1085: PetscCheck(lda == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Leading dimension (%" PetscInt_FMT ") different than local number of rows (%" PetscInt_FMT ")", lda, A->rmap->n);
1086: b->roworiented = PETSC_FALSE;
1087: PetscCall(MatGetOwnershipIS(A, &ir, &ic));
1088: PetscCall(ISGetIndices(ir, &rows));
1089: PetscCall(ISGetIndices(ic, &cols));
1090: PetscCall(MatSetValues(Bmpi, A->rmap->n, rows, A->cmap->N, cols, aarray, INSERT_VALUES));
1091: PetscCall(ISRestoreIndices(ir, &rows));
1092: PetscCall(ISRestoreIndices(ic, &cols));
1093: PetscCall(ISDestroy(&ic));
1094: PetscCall(ISDestroy(&ir));
1095: }
1096: PetscCall(MatDenseRestoreArrayRead(A, &aarray));
1097: PetscCall(MatAssemblyBegin(Bmpi, MAT_FINAL_ASSEMBLY));
1098: PetscCall(MatAssemblyEnd(Bmpi, MAT_FINAL_ASSEMBLY));
1099: if (reuse == MAT_INPLACE_MATRIX) {
1100: PetscCall(MatHeaderReplace(A, &Bmpi));
1101: } else *B = Bmpi;
1102: PetscFunctionReturn(PETSC_SUCCESS);
1103: }
1105: PETSC_INTERN PetscErrorCode MatConvert_AIJ_ScaLAPACK(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
1106: {
1107: Mat mat_scal;
1108: PetscInt M = A->rmap->N, N = A->cmap->N, rstart = A->rmap->rstart, rend = A->rmap->rend, m, n, row, ncols;
1109: const PetscInt *cols;
1110: const PetscScalar *vals;
1112: PetscFunctionBegin;
1113: if (reuse == MAT_REUSE_MATRIX) {
1114: mat_scal = *newmat;
1115: PetscCall(MatZeroEntries(mat_scal));
1116: } else {
1117: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_scal));
1118: m = PETSC_DECIDE;
1119: PetscCall(PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A), &m, &M));
1120: n = PETSC_DECIDE;
1121: PetscCall(PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A), &n, &N));
1122: PetscCall(MatSetSizes(mat_scal, m, n, M, N));
1123: PetscCall(MatSetType(mat_scal, MATSCALAPACK));
1124: PetscCall(MatSetUp(mat_scal));
1125: }
1126: for (row = rstart; row < rend; row++) {
1127: PetscCall(MatGetRow(A, row, &ncols, &cols, &vals));
1128: PetscCall(MatSetValues(mat_scal, 1, &row, ncols, cols, vals, INSERT_VALUES));
1129: PetscCall(MatRestoreRow(A, row, &ncols, &cols, &vals));
1130: }
1131: PetscCall(MatAssemblyBegin(mat_scal, MAT_FINAL_ASSEMBLY));
1132: PetscCall(MatAssemblyEnd(mat_scal, MAT_FINAL_ASSEMBLY));
1134: if (reuse == MAT_INPLACE_MATRIX) PetscCall(MatHeaderReplace(A, &mat_scal));
1135: else *newmat = mat_scal;
1136: PetscFunctionReturn(PETSC_SUCCESS);
1137: }
1139: PETSC_INTERN PetscErrorCode MatConvert_SBAIJ_ScaLAPACK(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
1140: {
1141: Mat mat_scal;
1142: PetscInt M = A->rmap->N, N = A->cmap->N, m, n, row, ncols, j, rstart = A->rmap->rstart, rend = A->rmap->rend;
1143: const PetscInt *cols;
1144: const PetscScalar *vals;
1145: PetscScalar v;
1147: PetscFunctionBegin;
1148: if (reuse == MAT_REUSE_MATRIX) {
1149: mat_scal = *newmat;
1150: PetscCall(MatZeroEntries(mat_scal));
1151: } else {
1152: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_scal));
1153: m = PETSC_DECIDE;
1154: PetscCall(PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A), &m, &M));
1155: n = PETSC_DECIDE;
1156: PetscCall(PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A), &n, &N));
1157: PetscCall(MatSetSizes(mat_scal, m, n, M, N));
1158: PetscCall(MatSetType(mat_scal, MATSCALAPACK));
1159: PetscCall(MatSetUp(mat_scal));
1160: }
1161: PetscCall(MatGetRowUpperTriangular(A));
1162: for (row = rstart; row < rend; row++) {
1163: PetscCall(MatGetRow(A, row, &ncols, &cols, &vals));
1164: PetscCall(MatSetValues(mat_scal, 1, &row, ncols, cols, vals, ADD_VALUES));
1165: for (j = 0; j < ncols; j++) { /* lower triangular part */
1166: if (cols[j] == row) continue;
1167: v = A->hermitian == PETSC_BOOL3_TRUE ? PetscConj(vals[j]) : vals[j];
1168: PetscCall(MatSetValues(mat_scal, 1, &cols[j], 1, &row, &v, ADD_VALUES));
1169: }
1170: PetscCall(MatRestoreRow(A, row, &ncols, &cols, &vals));
1171: }
1172: PetscCall(MatRestoreRowUpperTriangular(A));
1173: PetscCall(MatAssemblyBegin(mat_scal, MAT_FINAL_ASSEMBLY));
1174: PetscCall(MatAssemblyEnd(mat_scal, MAT_FINAL_ASSEMBLY));
1176: if (reuse == MAT_INPLACE_MATRIX) PetscCall(MatHeaderReplace(A, &mat_scal));
1177: else *newmat = mat_scal;
1178: PetscFunctionReturn(PETSC_SUCCESS);
1179: }
1181: static PetscErrorCode MatScaLAPACKSetPreallocation(Mat A)
1182: {
1183: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
1184: PetscInt sz = 0;
1186: PetscFunctionBegin;
1187: PetscCall(PetscLayoutSetUp(A->rmap));
1188: PetscCall(PetscLayoutSetUp(A->cmap));
1189: if (!a->lld) a->lld = a->locr;
1191: PetscCall(PetscFree(a->loc));
1192: PetscCall(PetscIntMultError(a->lld, a->locc, &sz));
1193: PetscCall(PetscCalloc1(sz, &a->loc));
1195: A->preallocated = PETSC_TRUE;
1196: PetscFunctionReturn(PETSC_SUCCESS);
1197: }
1199: static PetscErrorCode MatDestroy_ScaLAPACK(Mat A)
1200: {
1201: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
1202: Mat_ScaLAPACK_Grid *grid;
1203: PetscBool flg;
1204: MPI_Comm icomm;
1206: PetscFunctionBegin;
1207: PetscCall(MatStashDestroy_Private(&A->stash));
1208: PetscCall(PetscFree(a->loc));
1209: PetscCall(PetscFree(a->pivots));
1210: PetscCall(PetscCommDuplicate(PetscObjectComm((PetscObject)A), &icomm, NULL));
1211: PetscCallMPI(MPI_Comm_get_attr(icomm, Petsc_ScaLAPACK_keyval, (void **)&grid, (int *)&flg));
1212: if (--grid->grid_refct == 0) {
1213: Cblacs_gridexit(grid->ictxt);
1214: Cblacs_gridexit(grid->ictxrow);
1215: Cblacs_gridexit(grid->ictxcol);
1216: PetscCall(PetscFree(grid));
1217: PetscCallMPI(MPI_Comm_delete_attr(icomm, Petsc_ScaLAPACK_keyval));
1218: }
1219: PetscCall(PetscCommDestroy(&icomm));
1220: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatGetOwnershipIS_C", NULL));
1221: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL));
1222: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatScaLAPACKSetBlockSizes_C", NULL));
1223: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatScaLAPACKGetBlockSizes_C", NULL));
1224: PetscCall(PetscFree(A->data));
1225: PetscFunctionReturn(PETSC_SUCCESS);
1226: }
1228: static PetscErrorCode MatSetUp_ScaLAPACK(Mat A)
1229: {
1230: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
1231: PetscBLASInt info = 0;
1232: PetscBool flg;
1234: PetscFunctionBegin;
1235: PetscCall(PetscLayoutSetUp(A->rmap));
1236: PetscCall(PetscLayoutSetUp(A->cmap));
1238: /* check that the layout is as enforced by MatCreateScaLAPACK() */
1239: PetscCall(MatScaLAPACKCheckLayout(A->rmap, &flg));
1240: PetscCheck(flg, A->rmap->comm, PETSC_ERR_SUP, "MATSCALAPACK must have equal local row sizes in all processes (except possibly the last one), consider using MatCreateScaLAPACK");
1241: PetscCall(MatScaLAPACKCheckLayout(A->cmap, &flg));
1242: PetscCheck(flg, A->cmap->comm, PETSC_ERR_SUP, "MATSCALAPACK must have equal local column sizes in all processes (except possibly the last one), consider using MatCreateScaLAPACK");
1244: /* compute local sizes */
1245: PetscCall(PetscBLASIntCast(A->rmap->N, &a->M));
1246: PetscCall(PetscBLASIntCast(A->cmap->N, &a->N));
1247: a->locr = SCALAPACKnumroc_(&a->M, &a->mb, &a->grid->myrow, &a->rsrc, &a->grid->nprow);
1248: a->locc = SCALAPACKnumroc_(&a->N, &a->nb, &a->grid->mycol, &a->csrc, &a->grid->npcol);
1249: a->lld = PetscMax(1, a->locr);
1251: /* allocate local array */
1252: PetscCall(MatScaLAPACKSetPreallocation(A));
1254: /* set up ScaLAPACK descriptor */
1255: PetscCallBLAS("SCALAPACKdescinit", SCALAPACKdescinit_(a->desc, &a->M, &a->N, &a->mb, &a->nb, &a->rsrc, &a->csrc, &a->grid->ictxt, &a->lld, &info));
1256: PetscCheckScaLapackInfo("descinit", info);
1257: PetscFunctionReturn(PETSC_SUCCESS);
1258: }
1260: static PetscErrorCode MatAssemblyBegin_ScaLAPACK(Mat A, MatAssemblyType type)
1261: {
1262: PetscInt nstash, reallocs;
1264: PetscFunctionBegin;
1265: if (A->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS);
1266: PetscCall(MatStashScatterBegin_Private(A, &A->stash, NULL));
1267: PetscCall(MatStashGetInfo_Private(&A->stash, &nstash, &reallocs));
1268: PetscCall(PetscInfo(A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs));
1269: PetscFunctionReturn(PETSC_SUCCESS);
1270: }
1272: static PetscErrorCode MatAssemblyEnd_ScaLAPACK(Mat A, MatAssemblyType type)
1273: {
1274: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
1275: PetscMPIInt n;
1276: PetscInt i, flg, *row, *col;
1277: PetscScalar *val;
1278: PetscBLASInt gridx, gcidx, lridx, lcidx, rsrc, csrc;
1280: PetscFunctionBegin;
1281: if (A->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS);
1282: while (1) {
1283: PetscCall(MatStashScatterGetMesg_Private(&A->stash, &n, &row, &col, &val, &flg));
1284: if (!flg) break;
1285: for (i = 0; i < n; i++) {
1286: PetscCall(PetscBLASIntCast(row[i] + 1, &gridx));
1287: PetscCall(PetscBLASIntCast(col[i] + 1, &gcidx));
1288: PetscCallBLAS("SCALAPACKinfog2l", SCALAPACKinfog2l_(&gridx, &gcidx, a->desc, &a->grid->nprow, &a->grid->npcol, &a->grid->myrow, &a->grid->mycol, &lridx, &lcidx, &rsrc, &csrc));
1289: PetscCheck(rsrc == a->grid->myrow && csrc == a->grid->mycol, PetscObjectComm((PetscObject)A), PETSC_ERR_LIB, "Something went wrong, received value does not belong to this process");
1290: switch (A->insertmode) {
1291: case INSERT_VALUES:
1292: a->loc[lridx - 1 + (lcidx - 1) * a->lld] = val[i];
1293: break;
1294: case ADD_VALUES:
1295: a->loc[lridx - 1 + (lcidx - 1) * a->lld] += val[i];
1296: break;
1297: default:
1298: SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for InsertMode %d", (int)A->insertmode);
1299: }
1300: }
1301: }
1302: PetscCall(MatStashScatterEnd_Private(&A->stash));
1303: PetscFunctionReturn(PETSC_SUCCESS);
1304: }
1306: static PetscErrorCode MatLoad_ScaLAPACK(Mat newMat, PetscViewer viewer)
1307: {
1308: Mat Adense, As;
1309: MPI_Comm comm;
1311: PetscFunctionBegin;
1312: PetscCall(PetscObjectGetComm((PetscObject)newMat, &comm));
1313: PetscCall(MatCreate(comm, &Adense));
1314: PetscCall(MatSetType(Adense, MATDENSE));
1315: PetscCall(MatLoad(Adense, viewer));
1316: PetscCall(MatConvert(Adense, MATSCALAPACK, MAT_INITIAL_MATRIX, &As));
1317: PetscCall(MatDestroy(&Adense));
1318: PetscCall(MatHeaderReplace(newMat, &As));
1319: PetscFunctionReturn(PETSC_SUCCESS);
1320: }
1322: static struct _MatOps MatOps_Values = {MatSetValues_ScaLAPACK,
1323: 0,
1324: 0,
1325: MatMult_ScaLAPACK,
1326: /* 4*/ MatMultAdd_ScaLAPACK,
1327: MatMultTranspose_ScaLAPACK,
1328: MatMultTransposeAdd_ScaLAPACK,
1329: MatSolve_ScaLAPACK,
1330: MatSolveAdd_ScaLAPACK,
1331: 0,
1332: /*10*/ 0,
1333: MatLUFactor_ScaLAPACK,
1334: MatCholeskyFactor_ScaLAPACK,
1335: 0,
1336: MatTranspose_ScaLAPACK,
1337: /*15*/ MatGetInfo_ScaLAPACK,
1338: 0,
1339: MatGetDiagonal_ScaLAPACK,
1340: MatDiagonalScale_ScaLAPACK,
1341: MatNorm_ScaLAPACK,
1342: /*20*/ MatAssemblyBegin_ScaLAPACK,
1343: MatAssemblyEnd_ScaLAPACK,
1344: MatSetOption_ScaLAPACK,
1345: MatZeroEntries_ScaLAPACK,
1346: /*24*/ 0,
1347: MatLUFactorSymbolic_ScaLAPACK,
1348: MatLUFactorNumeric_ScaLAPACK,
1349: MatCholeskyFactorSymbolic_ScaLAPACK,
1350: MatCholeskyFactorNumeric_ScaLAPACK,
1351: /*29*/ MatSetUp_ScaLAPACK,
1352: 0,
1353: 0,
1354: 0,
1355: 0,
1356: /*34*/ MatDuplicate_ScaLAPACK,
1357: 0,
1358: 0,
1359: 0,
1360: 0,
1361: /*39*/ MatAXPY_ScaLAPACK,
1362: 0,
1363: 0,
1364: 0,
1365: MatCopy_ScaLAPACK,
1366: /*44*/ 0,
1367: MatScale_ScaLAPACK,
1368: MatShift_ScaLAPACK,
1369: 0,
1370: 0,
1371: /*49*/ 0,
1372: 0,
1373: 0,
1374: 0,
1375: 0,
1376: /*54*/ 0,
1377: 0,
1378: 0,
1379: 0,
1380: 0,
1381: /*59*/ 0,
1382: MatDestroy_ScaLAPACK,
1383: MatView_ScaLAPACK,
1384: 0,
1385: 0,
1386: /*64*/ 0,
1387: 0,
1388: 0,
1389: 0,
1390: 0,
1391: /*69*/ 0,
1392: 0,
1393: MatConvert_ScaLAPACK_Dense,
1394: 0,
1395: 0,
1396: /*74*/ 0,
1397: 0,
1398: 0,
1399: 0,
1400: 0,
1401: /*79*/ 0,
1402: 0,
1403: 0,
1404: 0,
1405: MatLoad_ScaLAPACK,
1406: /*84*/ 0,
1407: 0,
1408: 0,
1409: 0,
1410: 0,
1411: /*89*/ 0,
1412: 0,
1413: MatMatMultNumeric_ScaLAPACK,
1414: 0,
1415: 0,
1416: /*94*/ 0,
1417: 0,
1418: 0,
1419: MatMatTransposeMultNumeric_ScaLAPACK,
1420: 0,
1421: /*99*/ MatProductSetFromOptions_ScaLAPACK,
1422: 0,
1423: 0,
1424: MatConjugate_ScaLAPACK,
1425: 0,
1426: /*104*/ 0,
1427: 0,
1428: 0,
1429: 0,
1430: 0,
1431: /*109*/ MatMatSolve_ScaLAPACK,
1432: 0,
1433: 0,
1434: 0,
1435: MatMissingDiagonal_ScaLAPACK,
1436: /*114*/ 0,
1437: 0,
1438: 0,
1439: 0,
1440: 0,
1441: /*119*/ 0,
1442: MatHermitianTranspose_ScaLAPACK,
1443: 0,
1444: 0,
1445: 0,
1446: /*124*/ 0,
1447: 0,
1448: 0,
1449: 0,
1450: 0,
1451: /*129*/ 0,
1452: 0,
1453: 0,
1454: 0,
1455: 0,
1456: /*134*/ 0,
1457: 0,
1458: 0,
1459: 0,
1460: 0,
1461: 0,
1462: /*140*/ 0,
1463: 0,
1464: 0,
1465: 0,
1466: 0,
1467: /*145*/ 0,
1468: 0,
1469: 0,
1470: 0,
1471: 0,
1472: /*150*/ 0,
1473: 0};
1475: static PetscErrorCode MatStashScatterBegin_ScaLAPACK(Mat mat, MatStash *stash, PetscInt *owners)
1476: {
1477: PetscInt *owner, *startv, *starti, tag1 = stash->tag1, tag2 = stash->tag2, bs2;
1478: PetscInt size = stash->size, nsends;
1479: PetscInt count, *sindices, **rindices, i, j, l;
1480: PetscScalar **rvalues, *svalues;
1481: MPI_Comm comm = stash->comm;
1482: MPI_Request *send_waits, *recv_waits, *recv_waits1, *recv_waits2;
1483: PetscMPIInt *sizes, *nlengths, nreceives;
1484: PetscInt *sp_idx, *sp_idy;
1485: PetscScalar *sp_val;
1486: PetscMatStashSpace space, space_next;
1487: PetscBLASInt gridx, gcidx, lridx, lcidx, rsrc, csrc;
1488: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)mat->data;
1490: PetscFunctionBegin;
1491: { /* make sure all processors are either in INSERTMODE or ADDMODE */
1492: InsertMode addv;
1493: PetscCall(MPIU_Allreduce((PetscEnum *)&mat->insertmode, (PetscEnum *)&addv, 1, MPIU_ENUM, MPI_BOR, PetscObjectComm((PetscObject)mat)));
1494: PetscCheck(addv != (ADD_VALUES | INSERT_VALUES), PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Some processors inserted others added");
1495: mat->insertmode = addv; /* in case this processor had no cache */
1496: }
1498: bs2 = stash->bs * stash->bs;
1500: /* first count number of contributors to each processor */
1501: PetscCall(PetscCalloc1(size, &nlengths));
1502: PetscCall(PetscMalloc1(stash->n + 1, &owner));
1504: i = j = 0;
1505: space = stash->space_head;
1506: while (space) {
1507: space_next = space->next;
1508: for (l = 0; l < space->local_used; l++) {
1509: PetscCall(PetscBLASIntCast(space->idx[l] + 1, &gridx));
1510: PetscCall(PetscBLASIntCast(space->idy[l] + 1, &gcidx));
1511: PetscCallBLAS("SCALAPACKinfog2l", SCALAPACKinfog2l_(&gridx, &gcidx, a->desc, &a->grid->nprow, &a->grid->npcol, &a->grid->myrow, &a->grid->mycol, &lridx, &lcidx, &rsrc, &csrc));
1512: j = Cblacs_pnum(a->grid->ictxt, rsrc, csrc);
1513: nlengths[j]++;
1514: owner[i] = j;
1515: i++;
1516: }
1517: space = space_next;
1518: }
1520: /* Now check what procs get messages - and compute nsends. */
1521: PetscCall(PetscCalloc1(size, &sizes));
1522: for (i = 0, nsends = 0; i < size; i++) {
1523: if (nlengths[i]) {
1524: sizes[i] = 1;
1525: nsends++;
1526: }
1527: }
1529: {
1530: PetscMPIInt *onodes, *olengths;
1531: /* Determine the number of messages to expect, their lengths, from from-ids */
1532: PetscCall(PetscGatherNumberOfMessages(comm, sizes, nlengths, &nreceives));
1533: PetscCall(PetscGatherMessageLengths(comm, nsends, nreceives, nlengths, &onodes, &olengths));
1534: /* since clubbing row,col - lengths are multiplied by 2 */
1535: for (i = 0; i < nreceives; i++) olengths[i] *= 2;
1536: PetscCall(PetscPostIrecvInt(comm, tag1, nreceives, onodes, olengths, &rindices, &recv_waits1));
1537: /* values are size 'bs2' lengths (and remove earlier factor 2 */
1538: for (i = 0; i < nreceives; i++) olengths[i] = olengths[i] * bs2 / 2;
1539: PetscCall(PetscPostIrecvScalar(comm, tag2, nreceives, onodes, olengths, &rvalues, &recv_waits2));
1540: PetscCall(PetscFree(onodes));
1541: PetscCall(PetscFree(olengths));
1542: }
1544: /* do sends:
1545: 1) starts[i] gives the starting index in svalues for stuff going to
1546: the ith processor
1547: */
1548: PetscCall(PetscMalloc2(bs2 * stash->n, &svalues, 2 * (stash->n + 1), &sindices));
1549: PetscCall(PetscMalloc1(2 * nsends, &send_waits));
1550: PetscCall(PetscMalloc2(size, &startv, size, &starti));
1551: /* use 2 sends the first with all_a, the next with all_i and all_j */
1552: startv[0] = 0;
1553: starti[0] = 0;
1554: for (i = 1; i < size; i++) {
1555: startv[i] = startv[i - 1] + nlengths[i - 1];
1556: starti[i] = starti[i - 1] + 2 * nlengths[i - 1];
1557: }
1559: i = 0;
1560: space = stash->space_head;
1561: while (space) {
1562: space_next = space->next;
1563: sp_idx = space->idx;
1564: sp_idy = space->idy;
1565: sp_val = space->val;
1566: for (l = 0; l < space->local_used; l++) {
1567: j = owner[i];
1568: if (bs2 == 1) {
1569: svalues[startv[j]] = sp_val[l];
1570: } else {
1571: PetscInt k;
1572: PetscScalar *buf1, *buf2;
1573: buf1 = svalues + bs2 * startv[j];
1574: buf2 = space->val + bs2 * l;
1575: for (k = 0; k < bs2; k++) buf1[k] = buf2[k];
1576: }
1577: sindices[starti[j]] = sp_idx[l];
1578: sindices[starti[j] + nlengths[j]] = sp_idy[l];
1579: startv[j]++;
1580: starti[j]++;
1581: i++;
1582: }
1583: space = space_next;
1584: }
1585: startv[0] = 0;
1586: for (i = 1; i < size; i++) startv[i] = startv[i - 1] + nlengths[i - 1];
1588: for (i = 0, count = 0; i < size; i++) {
1589: if (sizes[i]) {
1590: PetscCallMPI(MPI_Isend(sindices + 2 * startv[i], 2 * nlengths[i], MPIU_INT, i, tag1, comm, send_waits + count++));
1591: PetscCallMPI(MPI_Isend(svalues + bs2 * startv[i], bs2 * nlengths[i], MPIU_SCALAR, i, tag2, comm, send_waits + count++));
1592: }
1593: }
1594: #if defined(PETSC_USE_INFO)
1595: PetscCall(PetscInfo(NULL, "No of messages: %" PetscInt_FMT "\n", nsends));
1596: for (i = 0; i < size; i++) {
1597: if (sizes[i]) PetscCall(PetscInfo(NULL, "Mesg_to: %" PetscInt_FMT ": size: %zu bytes\n", i, (size_t)(nlengths[i] * (bs2 * sizeof(PetscScalar) + 2 * sizeof(PetscInt)))));
1598: }
1599: #endif
1600: PetscCall(PetscFree(nlengths));
1601: PetscCall(PetscFree(owner));
1602: PetscCall(PetscFree2(startv, starti));
1603: PetscCall(PetscFree(sizes));
1605: /* recv_waits need to be contiguous for MatStashScatterGetMesg_Private() */
1606: PetscCall(PetscMalloc1(2 * nreceives, &recv_waits));
1608: for (i = 0; i < nreceives; i++) {
1609: recv_waits[2 * i] = recv_waits1[i];
1610: recv_waits[2 * i + 1] = recv_waits2[i];
1611: }
1612: stash->recv_waits = recv_waits;
1614: PetscCall(PetscFree(recv_waits1));
1615: PetscCall(PetscFree(recv_waits2));
1617: stash->svalues = svalues;
1618: stash->sindices = sindices;
1619: stash->rvalues = rvalues;
1620: stash->rindices = rindices;
1621: stash->send_waits = send_waits;
1622: stash->nsends = nsends;
1623: stash->nrecvs = nreceives;
1624: stash->reproduce_count = 0;
1625: PetscFunctionReturn(PETSC_SUCCESS);
1626: }
1628: static PetscErrorCode MatScaLAPACKSetBlockSizes_ScaLAPACK(Mat A, PetscInt mb, PetscInt nb)
1629: {
1630: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
1632: PetscFunctionBegin;
1633: PetscCheck(!A->preallocated, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Cannot change block sizes after MatSetUp");
1634: PetscCheck(mb >= 1 || mb == PETSC_DECIDE, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "mb %" PetscInt_FMT " must be at least 1", mb);
1635: PetscCheck(nb >= 1 || nb == PETSC_DECIDE, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "nb %" PetscInt_FMT " must be at least 1", nb);
1636: PetscCall(PetscBLASIntCast((mb == PETSC_DECIDE) ? DEFAULT_BLOCKSIZE : mb, &a->mb));
1637: PetscCall(PetscBLASIntCast((nb == PETSC_DECIDE) ? a->mb : nb, &a->nb));
1638: PetscFunctionReturn(PETSC_SUCCESS);
1639: }
1641: /*@
1642: MatScaLAPACKSetBlockSizes - Sets the block sizes to be used for the distribution of
1643: the `MATSCALAPACK` matrix
1645: Logically Collective
1647: Input Parameters:
1648: + A - a `MATSCALAPACK` matrix
1649: . mb - the row block size
1650: - nb - the column block size
1652: Level: intermediate
1654: Note:
1655: This block size has a different meaning from the block size associated with `MatSetBlockSize()` used for sparse matrices
1657: .seealso: [](ch_matrices), `Mat`, `MATSCALAPACK`, `MatCreateScaLAPACK()`, `MatScaLAPACKGetBlockSizes()`
1658: @*/
1659: PetscErrorCode MatScaLAPACKSetBlockSizes(Mat A, PetscInt mb, PetscInt nb)
1660: {
1661: PetscFunctionBegin;
1665: PetscTryMethod(A, "MatScaLAPACKSetBlockSizes_C", (Mat, PetscInt, PetscInt), (A, mb, nb));
1666: PetscFunctionReturn(PETSC_SUCCESS);
1667: }
1669: static PetscErrorCode MatScaLAPACKGetBlockSizes_ScaLAPACK(Mat A, PetscInt *mb, PetscInt *nb)
1670: {
1671: Mat_ScaLAPACK *a = (Mat_ScaLAPACK *)A->data;
1673: PetscFunctionBegin;
1674: if (mb) *mb = a->mb;
1675: if (nb) *nb = a->nb;
1676: PetscFunctionReturn(PETSC_SUCCESS);
1677: }
1679: /*@
1680: MatScaLAPACKGetBlockSizes - Gets the block sizes used in the distribution of
1681: the `MATSCALAPACK` matrix
1683: Not Collective
1685: Input Parameter:
1686: . A - a `MATSCALAPACK` matrix
1688: Output Parameters:
1689: + mb - the row block size
1690: - nb - the column block size
1692: Level: intermediate
1694: Note:
1695: This block size has a different meaning from the block size associated with `MatSetBlockSize()` used for sparse matrices
1697: .seealso: [](ch_matrices), `Mat`, `MATSCALAPACK`, `MatCreateScaLAPACK()`, `MatScaLAPACKSetBlockSizes()`
1698: @*/
1699: PetscErrorCode MatScaLAPACKGetBlockSizes(Mat A, PetscInt *mb, PetscInt *nb)
1700: {
1701: PetscFunctionBegin;
1703: PetscUseMethod(A, "MatScaLAPACKGetBlockSizes_C", (Mat, PetscInt *, PetscInt *), (A, mb, nb));
1704: PetscFunctionReturn(PETSC_SUCCESS);
1705: }
1707: PETSC_INTERN PetscErrorCode MatStashScatterGetMesg_Ref(MatStash *, PetscMPIInt *, PetscInt **, PetscInt **, PetscScalar **, PetscInt *);
1708: PETSC_INTERN PetscErrorCode MatStashScatterEnd_Ref(MatStash *);
1710: /*MC
1711: MATSCALAPACK = "scalapack" - A matrix type for dense matrices using the ScaLAPACK package
1713: Use `./configure --download-scalapack` to install PETSc to use ScaLAPACK
1715: Options Database Keys:
1716: + -mat_type scalapack - sets the matrix type to `MATSCALAPACK`
1717: . -pc_factor_mat_solver_type scalapack - to use this direct solver with the option `-pc_type lu`
1718: . -mat_scalapack_grid_height - sets Grid Height for 2D cyclic ordering of internal matrix
1719: - -mat_scalapack_block_sizes - size of the blocks to use (one or two integers separated by comma)
1721: Level: intermediate
1723: Note:
1724: Note unlike most matrix formats, this format does not store all the matrix entries for a contiguous
1725: range of rows on an MPI rank. Use `MatGetOwnershipIS()` to determine what values are stored on
1726: the given rank.
1728: .seealso: [](ch_matrices), `Mat`, `MATSCALAPACK`, `MATDENSE`, `MATELEMENTAL`, `MatGetOwnershipIS()`, `MatCreateScaLAPACK()`
1729: M*/
1731: PETSC_EXTERN PetscErrorCode MatCreate_ScaLAPACK(Mat A)
1732: {
1733: Mat_ScaLAPACK *a;
1734: PetscBool flg, flg1;
1735: Mat_ScaLAPACK_Grid *grid;
1736: MPI_Comm icomm;
1737: PetscBLASInt nprow, npcol, myrow, mycol;
1738: PetscInt optv1, k = 2, array[2] = {0, 0};
1739: PetscMPIInt size;
1741: PetscFunctionBegin;
1742: A->ops[0] = MatOps_Values;
1743: A->insertmode = NOT_SET_VALUES;
1745: PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)A), 1, &A->stash));
1746: A->stash.ScatterBegin = MatStashScatterBegin_ScaLAPACK;
1747: A->stash.ScatterGetMesg = MatStashScatterGetMesg_Ref;
1748: A->stash.ScatterEnd = MatStashScatterEnd_Ref;
1749: A->stash.ScatterDestroy = NULL;
1751: PetscCall(PetscNew(&a));
1752: A->data = (void *)a;
1754: /* Grid needs to be shared between multiple Mats on the same communicator, implement by attribute caching on the MPI_Comm */
1755: if (Petsc_ScaLAPACK_keyval == MPI_KEYVAL_INVALID) {
1756: PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, MPI_COMM_NULL_DELETE_FN, &Petsc_ScaLAPACK_keyval, (void *)0));
1757: PetscCall(PetscRegisterFinalize(Petsc_ScaLAPACK_keyval_free));
1758: PetscCall(PetscCitationsRegister(ScaLAPACKCitation, &ScaLAPACKCite));
1759: }
1760: PetscCall(PetscCommDuplicate(PetscObjectComm((PetscObject)A), &icomm, NULL));
1761: PetscCallMPI(MPI_Comm_get_attr(icomm, Petsc_ScaLAPACK_keyval, (void **)&grid, (int *)&flg));
1762: if (!flg) {
1763: PetscCall(PetscNew(&grid));
1765: PetscCallMPI(MPI_Comm_size(icomm, &size));
1766: grid->nprow = (PetscInt)(PetscSqrtReal((PetscReal)size) + 0.001);
1768: PetscOptionsBegin(PetscObjectComm((PetscObject)A), ((PetscObject)A)->prefix, "ScaLAPACK Grid Options", "Mat");
1769: PetscCall(PetscOptionsInt("-mat_scalapack_grid_height", "Grid Height", "None", grid->nprow, &optv1, &flg1));
1770: if (flg1) {
1771: PetscCheck(size % optv1 == 0, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_INCOMP, "Grid Height %" PetscInt_FMT " must evenly divide CommSize %d", optv1, size);
1772: grid->nprow = optv1;
1773: }
1774: PetscOptionsEnd();
1776: if (size % grid->nprow) grid->nprow = 1; /* cannot use a squarish grid, use a 1d grid */
1777: grid->npcol = size / grid->nprow;
1778: PetscCall(PetscBLASIntCast(grid->nprow, &nprow));
1779: PetscCall(PetscBLASIntCast(grid->npcol, &npcol));
1780: grid->ictxt = Csys2blacs_handle(icomm);
1781: Cblacs_gridinit(&grid->ictxt, "R", nprow, npcol);
1782: Cblacs_gridinfo(grid->ictxt, &nprow, &npcol, &myrow, &mycol);
1783: grid->grid_refct = 1;
1784: grid->nprow = nprow;
1785: grid->npcol = npcol;
1786: grid->myrow = myrow;
1787: grid->mycol = mycol;
1788: /* auxiliary 1d BLACS contexts for 1xsize and sizex1 grids */
1789: grid->ictxrow = Csys2blacs_handle(icomm);
1790: Cblacs_gridinit(&grid->ictxrow, "R", 1, size);
1791: grid->ictxcol = Csys2blacs_handle(icomm);
1792: Cblacs_gridinit(&grid->ictxcol, "R", size, 1);
1793: PetscCallMPI(MPI_Comm_set_attr(icomm, Petsc_ScaLAPACK_keyval, (void *)grid));
1795: } else grid->grid_refct++;
1796: PetscCall(PetscCommDestroy(&icomm));
1797: a->grid = grid;
1798: a->mb = DEFAULT_BLOCKSIZE;
1799: a->nb = DEFAULT_BLOCKSIZE;
1801: PetscOptionsBegin(PetscObjectComm((PetscObject)A), NULL, "ScaLAPACK Options", "Mat");
1802: PetscCall(PetscOptionsIntArray("-mat_scalapack_block_sizes", "Size of the blocks to use (one or two comma-separated integers)", "MatCreateScaLAPACK", array, &k, &flg));
1803: if (flg) {
1804: a->mb = array[0];
1805: a->nb = (k > 1) ? array[1] : a->mb;
1806: }
1807: PetscOptionsEnd();
1809: a->roworiented = PETSC_TRUE;
1810: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatGetOwnershipIS_C", MatGetOwnershipIS_ScaLAPACK));
1811: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatScaLAPACKSetBlockSizes_C", MatScaLAPACKSetBlockSizes_ScaLAPACK));
1812: PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatScaLAPACKGetBlockSizes_C", MatScaLAPACKGetBlockSizes_ScaLAPACK));
1813: PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATSCALAPACK));
1814: PetscFunctionReturn(PETSC_SUCCESS);
1815: }
1817: /*@C
1818: MatCreateScaLAPACK - Creates a dense parallel matrix in ScaLAPACK format
1819: (2D block cyclic distribution) for a `MATSCALAPACK` matrix
1821: Collective
1823: Input Parameters:
1824: + comm - MPI communicator
1825: . mb - row block size (or `PETSC_DECIDE` to have it set)
1826: . nb - column block size (or `PETSC_DECIDE` to have it set)
1827: . M - number of global rows
1828: . N - number of global columns
1829: . rsrc - coordinate of process that owns the first row of the distributed matrix
1830: - csrc - coordinate of process that owns the first column of the distributed matrix
1832: Output Parameter:
1833: . A - the matrix
1835: Options Database Key:
1836: . -mat_scalapack_block_sizes - size of the blocks to use (one or two integers separated by comma)
1838: Level: intermediate
1840: Notes:
1841: If `PETSC_DECIDE` is used for the block sizes, then an appropriate value is chosen
1843: It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`,
1844: MatXXXXSetPreallocation() paradigm instead of this routine directly.
1845: [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`]
1847: Storate is completely managed by ScaLAPACK, so this requires PETSc to be
1848: configured with ScaLAPACK. In particular, PETSc's local sizes lose
1849: significance and are thus ignored. The block sizes refer to the values
1850: used for the distributed matrix, not the same meaning as in `MATBAIJ`.
1852: .seealso: [](ch_matrices), `Mat`, `MATSCALAPACK`, `MATDENSE`, `MATELEMENTAL`, `MatCreate()`, `MatCreateDense()`, `MatSetValues()`
1853: @*/
1854: PetscErrorCode MatCreateScaLAPACK(MPI_Comm comm, PetscInt mb, PetscInt nb, PetscInt M, PetscInt N, PetscInt rsrc, PetscInt csrc, Mat *A)
1855: {
1856: Mat_ScaLAPACK *a;
1857: PetscInt m, n;
1859: PetscFunctionBegin;
1860: PetscCall(MatCreate(comm, A));
1861: PetscCall(MatSetType(*A, MATSCALAPACK));
1862: PetscCheck(M != PETSC_DECIDE && N != PETSC_DECIDE, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Cannot use PETSC_DECIDE for matrix dimensions");
1863: /* rows and columns are NOT distributed according to PetscSplitOwnership */
1864: m = PETSC_DECIDE;
1865: PetscCall(PetscSplitOwnershipEqual(comm, &m, &M));
1866: n = PETSC_DECIDE;
1867: PetscCall(PetscSplitOwnershipEqual(comm, &n, &N));
1868: PetscCall(MatSetSizes(*A, m, n, M, N));
1869: a = (Mat_ScaLAPACK *)(*A)->data;
1870: PetscCall(PetscBLASIntCast(M, &a->M));
1871: PetscCall(PetscBLASIntCast(N, &a->N));
1872: PetscCall(PetscBLASIntCast((mb == PETSC_DECIDE) ? DEFAULT_BLOCKSIZE : mb, &a->mb));
1873: PetscCall(PetscBLASIntCast((nb == PETSC_DECIDE) ? a->mb : nb, &a->nb));
1874: PetscCall(PetscBLASIntCast(rsrc, &a->rsrc));
1875: PetscCall(PetscBLASIntCast(csrc, &a->csrc));
1876: PetscCall(MatSetUp(*A));
1877: PetscFunctionReturn(PETSC_SUCCESS);
1878: }