Actual source code: ex5.c
petsc-3.12.5 2020-03-29
2: static char help[] = "Demonstrates using the PetscBag Object\n\n";
4: /*T
5: Concepts: bags;
6: Processors: n
7: T*/
10: #include <petscsys.h>
11: #include <petscbag.h>
12: #include <petscviewer.h>
14: /*
15: Enum variables can be stored in a bag but require a string array
16: to name their fields. The fourth entry in this example is the name
17: of the enum, the fifth is the prefix (none in this case), and the last
18: entry is the null string.
19: */
20: typedef enum {
21: THIS = 0, THAT = 1, THE_OTHER = 2
22: } YourChoice;
23: const char *EnumeratedChoices[] = {"THIS","THAT","THE_OTHER","EnumeratedChoices","",0};
25: /*
26: Data structures can be used in a bag as long as they
27: are declared in the bag with a variable, not with a pointer.
28: */
29: typedef struct {
30: PetscReal x1,x2;
31: } TwoVec;
33: /*
34: Define a C struct that will contain my program's parameters.
36: A PETSc bag is merely a representation of a C struct that can be printed, saved to a file and loaded from a file.
37: */
38: typedef struct {
39: PetscScalar W;
40: PetscReal rho;
41: TwoVec pos;
42: PetscInt Ii;
43: PetscInt iarray[3];
44: PetscReal rarray[2];
45: PetscBool T;
46: PetscBool Tarray[3];
47: PetscDataType dt;
48: char filename[PETSC_MAX_PATH_LEN];
49: YourChoice which;
50: } Parameter;
53: int main(int argc,char **argv)
54: {
56: PetscBag bag;
57: Parameter *params;
58: PetscViewer viewer;
59: PetscBool flg;
60: char filename[PETSC_MAX_PATH_LEN] = "binaryoutput";
62: /*
63: Every PETSc routine should begin with the PetscInitialize() routine.
64: argc, argv - These command line arguments are taken to extract the options
65: supplied to PETSc and options supplied to MPI.
66: help - When PETSc executable is invoked with the option -help,
67: it prints the various options that can be applied at
68: runtime. The user can use the "help" variable place
69: additional help messages in this printout.
70: */
71: PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr;
73: /* Create an empty bag */
74: PetscBagCreate(PETSC_COMM_WORLD,sizeof(Parameter),&bag);
75: PetscBagGetData(bag,(void**)¶ms);
77: /* register variables, defaults, names, help strings */
78: PetscBagSetName(bag,"ParameterBag","contains parameters for simulations of top-secret, dangerous physics");
79: PetscBagSetOptionsPrefix(bag, "pbag_");
80: PetscBagRegisterString(bag,¶ms->filename,PETSC_MAX_PATH_LEN,"myfile","filename","Name of secret file");
81: PetscBagRegisterReal (bag,¶ms->rho,3.0,"rho","Density, kg/m^3");
82: PetscBagRegisterScalar(bag,¶ms->W, 5.0,"W","Vertical velocity, m/sec");
83: PetscBagRegisterInt (bag,¶ms->Ii, 2,"modes_x","Number of modes in x-direction");
85: params->iarray[0] = 1;
86: params->iarray[1] = 2;
87: params->iarray[2] = 3;
89: PetscBagRegisterIntArray(bag,¶ms->iarray, 3,"int_array","Int array with 3 locations");
91: params->rarray[0] = -1.0;
92: params->rarray[1] = -2.0;
94: PetscBagRegisterRealArray(bag,¶ms->rarray, 2,"real_array","Real array with 2 locations");
95: PetscBagRegisterBool (bag,¶ms->T, PETSC_FALSE,"do_output","Write output file (yes/no)");
96: PetscBagRegisterBoolArray(bag,¶ms->Tarray, 3,"bool_array","Bool array with 3 locations");
97: PetscBagRegisterEnum (bag,¶ms->dt, PetscDataTypes,(PetscEnum)PETSC_INT,"dt","meaningless datatype");
98: PetscBagRegisterReal (bag,¶ms->pos.x1,1.0,"x1","x position");
99: PetscBagRegisterReal (bag,¶ms->pos.x2,1.9,"x2","y position");
100: PetscBagRegisterEnum (bag,¶ms->which, EnumeratedChoices, (PetscEnum)THAT, "choose","Express yourself by choosing among enumerated things");
103: /* This option allows loading user-provided PetscBag */
104: PetscOptionsGetString(NULL,NULL,"-f",filename,sizeof(filename),&flg);
105: if (!flg) {
107: /* write bag to stdio & binary file */
108: PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD);
109: PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_WRITE,&viewer);
110: PetscBagView(bag,viewer);
111: PetscViewerDestroy(&viewer);
112: }
114: PetscMemzero(params,sizeof(Parameter));
116: /* load bag from file & write to stdio */
117: PetscViewerBinaryOpen(PETSC_COMM_WORLD,filename,FILE_MODE_READ,&viewer);
118: PetscBagLoad(viewer,bag);
119: PetscViewerDestroy(&viewer);
120: PetscBagSetFromOptions(bag);
121: PetscBagView(bag,PETSC_VIEWER_STDOUT_WORLD);
123: /* reuse the parameter struct */
124: PetscBagGetData(bag,(void**)¶ms);
125: PetscPrintf(PETSC_COMM_WORLD,"The value of rho after loading is: %f\n",(double)params->rho);
127: /* clean up and exit */
128: PetscBagDestroy(&bag);
129: PetscFinalize();
130: return ierr;
131: }
134: /*TEST
136: test:
137: args: -pbag_rho 44 -pbag_do_output true
138: requires: yaml !complex
140: test:
141: suffix: yaml
142: requires: yaml !complex
143: args: -options_file_yaml bag.yml -options_view
144: filter: grep -v saws_port_auto_select |grep -v malloc_dump | grep -v display | grep -v check_pointer_intensity | grep -v error_output_stdout | grep -v nox | grep -v nox_warning
145: localrunfiles: bag.yml
147: TEST*/