Actual source code: mpiaijsbaij.c

petsc-3.11.4 2019-09-28
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  2:  #include <../src/mat/impls/sbaij/mpi/mpisbaij.h>
  3:  #include <../src/mat/impls/aij/mpi/mpiaij.h>
  4:  #include <petsc/private/matimpl.h>
  5:  #include <petscmat.h>

  7: PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPISBAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
  8: {
  9:   PetscErrorCode    ierr;
 10:   Mat               M;
 11:   Mat_MPIAIJ        *mpimat = (Mat_MPIAIJ*)A->data;
 12:   Mat_SeqAIJ        *Aa     = (Mat_SeqAIJ*)mpimat->A->data,*Ba = (Mat_SeqAIJ*)mpimat->B->data;
 13:   PetscInt          *d_nnz,*o_nnz;
 14:   PetscInt          i,j,nz;
 15:   PetscInt          m,n,lm,ln;
 16:   PetscInt          rstart,rend;
 17:   const PetscScalar *vwork;
 18:   const PetscInt    *cwork;

 21:   if (!A->symmetric) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_USER,"Matrix must be symmetric. Call MatSetOption(mat,MAT_SYMMETRIC,PETSC_TRUE)");
 22:   if (reuse != MAT_REUSE_MATRIX) {
 23:     MatGetSize(A,&m,&n);
 24:     MatGetLocalSize(A,&lm,&ln);
 25:     PetscMalloc2(lm,&d_nnz,lm,&o_nnz);

 27:     MatMarkDiagonal_SeqAIJ(mpimat->A);
 28:     for (i=0; i<lm; i++) {
 29:       d_nnz[i] = Aa->i[i+1] - Aa->diag[i];
 30:       o_nnz[i] = Ba->i[i+1] - Ba->i[i];
 31:     }

 33:     MatCreate(PetscObjectComm((PetscObject)A),&M);
 34:     MatSetSizes(M,lm,ln,m,n);
 35:     MatSetType(M,MATMPISBAIJ);
 36:     MatSeqSBAIJSetPreallocation(M,1,0,d_nnz);
 37:     MatMPISBAIJSetPreallocation(M,1,0,d_nnz,0,o_nnz);
 38:     PetscFree2(d_nnz,o_nnz);
 39:   } else M = *newmat;

 41:   MatGetOwnershipRange(A,&rstart,&rend);
 42:   for (i=rstart; i<rend; i++) {
 43:     MatGetRow(A,i,&nz,&cwork,&vwork);
 44:     j    = 0;
 45:     while (cwork[j] < i) {
 46:       j++; nz--;
 47:     }
 48:     MatSetValues(M,1,&i,nz,cwork+j,vwork+j,INSERT_VALUES);
 49:     MatRestoreRow(A,i,&nz,&cwork,&vwork);
 50:   }
 51:   MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY);
 52:   MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY);

 54:   if (reuse == MAT_INPLACE_MATRIX) {
 55:     MatHeaderReplace(A,&M);
 56:   } else {
 57:     *newmat = M;
 58:   }
 59:   return(0);
 60: }
 61: /* contributed by Dahai Guo <dhguo@ncsa.uiuc.edu> April 2011 */
 62: PETSC_INTERN PetscErrorCode MatConvert_MPIBAIJ_MPISBAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
 63: {
 64:   PetscErrorCode    ierr;
 65:   Mat               M;
 66:   Mat_MPIBAIJ       *mpimat = (Mat_MPIBAIJ*)A->data;
 67:   Mat_SeqBAIJ       *Aa     = (Mat_SeqBAIJ*)mpimat->A->data,*Ba = (Mat_SeqBAIJ*)mpimat->B->data;
 68:   PetscInt          *d_nnz,*o_nnz;
 69:   PetscInt          i,j,nz;
 70:   PetscInt          m,n,lm,ln;
 71:   PetscInt          rstart,rend;
 72:   const PetscScalar *vwork;
 73:   const PetscInt    *cwork;
 74:   PetscInt          bs = A->rmap->bs;

 77:   if (reuse != MAT_REUSE_MATRIX) {
 78:     MatGetSize(A,&m,&n);
 79:     MatGetLocalSize(A,&lm,&ln);
 80:     PetscMalloc2(lm/bs,&d_nnz,lm/bs,&o_nnz);

 82:     MatMarkDiagonal_SeqBAIJ(mpimat->A);
 83:     for (i=0; i<lm/bs; i++) {
 84:       d_nnz[i] = Aa->i[i+1] - Aa->diag[i];
 85:       o_nnz[i] = Ba->i[i+1] - Ba->i[i];
 86:     }

 88:     MatCreate(PetscObjectComm((PetscObject)A),&M);
 89:     MatSetSizes(M,lm,ln,m,n);
 90:     MatSetType(M,MATMPISBAIJ);
 91:     MatSeqSBAIJSetPreallocation(M,bs,0,d_nnz);
 92:     MatMPISBAIJSetPreallocation(M,bs,0,d_nnz,0,o_nnz);

 94:     PetscFree2(d_nnz,o_nnz);
 95:   } else M = *newmat;

 97:   MatGetOwnershipRange(A,&rstart,&rend);
 98:   MatSetOption(M,MAT_IGNORE_LOWER_TRIANGULAR,PETSC_TRUE);
 99:   for (i=rstart; i<rend; i++) {
100:     MatGetRow(A,i,&nz,&cwork,&vwork);
101:     j    = 0;
102:     MatSetValues(M,1,&i,nz,cwork+j,vwork+j,INSERT_VALUES);
103:     MatRestoreRow(A,i,&nz,&cwork,&vwork);
104:   }
105:   MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY);
106:   MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY);

108:   if (reuse == MAT_INPLACE_MATRIX) {
109:     MatHeaderReplace(A,&M);
110:   } else {
111:     *newmat = M;
112:   }
113:   return(0);
114: }