1:  #include <petsc/private/dmmbimpl.h>
  2:  #include <petscdmmoab.h>

  4: static PetscErrorCode DMMoab_GetWriteOptions_Private(PetscInt fsetid, PetscInt numproc, PetscInt dim, MoabWriteMode mode, PetscInt dbglevel, const char* dm_opts, const char* extra_opts, const char** write_opts)
  5: {
  7:   char           *wopts;
  8:   char           wopts_par[PETSC_MAX_PATH_LEN];
  9:   char           wopts_parid[PETSC_MAX_PATH_LEN];
 10:   char           wopts_dbg[PETSC_MAX_PATH_LEN];

 13:   PetscMalloc1(PETSC_MAX_PATH_LEN, &wopts);
 14:   PetscMemzero(&wopts_par, PETSC_MAX_PATH_LEN);
 15:   PetscMemzero(&wopts_parid, PETSC_MAX_PATH_LEN);
 16:   PetscMemzero(&wopts_dbg, PETSC_MAX_PATH_LEN);

 18:   // do parallel read unless only one processor
 19:   if (numproc > 1) {
 20:     PetscSNPrintf(wopts_par, PETSC_MAX_PATH_LEN, "PARALLEL=%s;", MoabWriteModes[mode]);
 21:     if (fsetid >= 0) {
 22:       PetscSNPrintf(wopts_parid, PETSC_MAX_PATH_LEN, "PARALLEL_COMM=%d;", fsetid);
 23:     }
 24:   }

 26:   if (dbglevel) {
 27:     PetscSNPrintf(wopts_dbg, PETSC_MAX_PATH_LEN, "CPUTIME;DEBUG_IO=%d;", dbglevel);
 28:   }

 30:   PetscSNPrintf(wopts, PETSC_MAX_PATH_LEN, "%s%s%s%s%s", wopts_par, wopts_parid, wopts_dbg, (extra_opts ? extra_opts : ""), (dm_opts ? dm_opts : ""));
 31:   *write_opts = wopts;
 32:   return(0);
 33: }


 36: /*@C
 37:   DMMoabOutput - Output the solution vectors that are stored in the DMMoab object as tags
 38:   along with the complete mesh data structure in the native H5M or VTK format. The H5M output file
 39:   can be visualized directly with Paraview (if compiled with appropriate plugin) or converted
 40:   with MOAB/tools/mbconvert to a VTK or Exodus file.

 42:   This routine can also be used for check-pointing purposes to store a complete history of
 43:   the solution along with any other necessary data to restart computations.

 45:   Collective

 47:   Input Parameters:
 48: + dm     - the discretization manager object containing solution in MOAB tags.
 49: .  filename - the name of the output file: e.g., poisson.h5m
 50: -  usrwriteopts - the parallel write options needed for serializing a MOAB mesh database. Can be NULL.
 51:    Reference (Parallel Mesh Initialization: http://ftp.mcs.anl.gov/pub/fathom/moab-docs/contents.html#fivetwo)

 53:   Level: intermediate

 55: .keywords: discretization manager, set, component solution

 57: .seealso: DMMoabLoadFromFile(), DMMoabSetGlobalFieldVector()
 58: @*/
 59: PetscErrorCode DMMoabOutput(DM dm, const char* filename, const char* usrwriteopts)
 60: {
 61:   DM_Moab         *dmmoab;
 62:   const char      *writeopts;
 63:   PetscBool       isftype;
 64:   PetscErrorCode  ierr;
 65:   moab::ErrorCode merr;

 69:   dmmoab = (DM_Moab*)(dm)->data;

 71:   PetscStrendswith(filename, "h5m", &isftype);

 73:   /* add mesh loading options specific to the DM */
 74:   if (isftype) {
 75: #ifdef MOAB_HAVE_MPI
 76:     DMMoab_GetWriteOptions_Private(dmmoab->pcomm->get_id(), dmmoab->pcomm->size(), dmmoab->dim, dmmoab->write_mode,
 77:                                           dmmoab->rw_dbglevel, dmmoab->extra_write_options, usrwriteopts, &writeopts);
 78: #else
 79:     DMMoab_GetWriteOptions_Private(0, 1, dmmoab->dim, dmmoab->write_mode,
 80:                                           dmmoab->rw_dbglevel, dmmoab->extra_write_options, usrwriteopts, &writeopts);
 81: #endif
 82:     PetscInfo2(dm, "Writing file %s with options: %s\n", filename, writeopts);
 83:   }
 84:   else {
 85:     writeopts = NULL;
 86:   }

 88:   /* output file, using parallel write */
 89:   merr = dmmoab->mbiface->write_file(filename, NULL, writeopts, &dmmoab->fileset, 1); MBERRVM(dmmoab->mbiface, "Writing output of DMMoab failed.", merr);
 90:   PetscFree(writeopts);
 91:   return(0);
 92: }