Actual source code: petscvec.h

petsc-3.4.0 2013-05-13
  1: /*
  2:     Defines the vector component of PETSc. Vectors generally represent
  3:   degrees of freedom for finite element/finite difference functions
  4:   on a grid. They have more mathematical structure then simple arrays.
  5: */

  7: #ifndef __PETSCVEC_H
  9: #include <petscis.h>
 10: #include <petscviewer.h>

 12: /*S
 13:      Vec - Abstract PETSc vector object

 15:    Level: beginner

 17:   Concepts: field variables, unknowns, arrays

 19: .seealso:  VecCreate(), VecType, VecSetType()
 20: S*/
 21: typedef struct _p_Vec*         Vec;

 23: /*S
 24:      VecScatter - Object used to manage communication of data
 25:        between vectors in parallel. Manages both scatters and gathers

 27:    Level: beginner

 29:   Concepts: scatter

 31: .seealso:  VecScatterCreate(), VecScatterBegin(), VecScatterEnd()
 32: S*/
 33: typedef struct _p_VecScatter*  VecScatter;

 35: /*E
 36:   ScatterMode - Determines the direction of a scatter

 38:   Level: beginner

 40: .seealso: VecScatter, VecScatterBegin(), VecScatterEnd()
 41: E*/
 42: typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;

 44: /*MC
 45:     SCATTER_FORWARD - Scatters the values as dictated by the VecScatterCreate() call

 47:     Level: beginner

 49: .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD_LOCAL,
 50:           SCATTER_REVERSE_LOCAL

 52: M*/

 54: /*MC
 55:     SCATTER_REVERSE - Moves the values in the opposite direction then the directions indicated in
 56:          in the VecScatterCreate()

 58:     Level: beginner

 60: .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL,
 61:           SCATTER_REVERSE_LOCAL

 63: M*/

 65: /*MC
 66:     SCATTER_FORWARD_LOCAL - Scatters the values as dictated by the VecScatterCreate() call except NO parallel communication
 67:        is done. Any variables that have be moved between processes are ignored

 69:     Level: developer

 71: .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_REVERSE, SCATTER_FORWARD,
 72:           SCATTER_REVERSE_LOCAL

 74: M*/

 76: /*MC
 77:     SCATTER_REVERSE_LOCAL - Moves the values in the opposite direction then the directions indicated in
 78:          in the VecScatterCreate()  except NO parallel communication
 79:        is done. Any variables that have be moved between processes are ignored

 81:     Level: developer

 83: .seealso: VecScatter, ScatterMode, VecScatterCreate(), VecScatterBegin(), VecScatterEnd(), SCATTER_FORWARD, SCATTER_FORWARD_LOCAL,
 84:           SCATTER_REVERSE

 86: M*/

 88: /*J
 89:     VecType - String with the name of a PETSc vector or the creation function
 90:        with an optional dynamic library name, for example
 91:        http://www.mcs.anl.gov/petsc/lib.a:myveccreate()

 93:    Level: beginner

 95: .seealso: VecSetType(), Vec
 96: J*/
 97: typedef const char* VecType;
 98: #define VECSEQ         "seq"
 99: #define VECMPI         "mpi"
100: #define VECSTANDARD    "standard"   /* seq on one process and mpi on several */
101: #define VECSHARED      "shared"
102: #define VECSIEVE       "sieve"
103: #define VECSEQCUSP     "seqcusp"
104: #define VECMPICUSP     "mpicusp"
105: #define VECCUSP        "cusp"       /* seqcusp on one process and mpicusp on several */
106: #define VECNEST        "nest"
107: #define VECSEQPTHREAD  "seqpthread"
108: #define VECMPIPTHREAD  "mpipthread"
109: #define VECPTHREAD     "pthread"    /* seqpthread on one process and mpipthread on several */


112: /* Logging support */
113: #define    VEC_FILE_CLASSID 1211214
114: PETSC_EXTERN PetscClassId VEC_CLASSID;
115: PETSC_EXTERN PetscClassId VEC_SCATTER_CLASSID;


118: PETSC_EXTERN PetscErrorCode VecInitializePackage(void);
119: PETSC_EXTERN PetscErrorCode VecFinalizePackage(void);

121: PETSC_EXTERN PetscErrorCode VecCreate(MPI_Comm,Vec*);
122: PETSC_EXTERN PetscErrorCode VecCreateSeq(MPI_Comm,PetscInt,Vec*);
123: PETSC_EXTERN PetscErrorCode VecCreateMPI(MPI_Comm,PetscInt,PetscInt,Vec*);
124: PETSC_EXTERN PetscErrorCode VecCreateSeqWithArray(MPI_Comm,PetscInt,PetscInt,const PetscScalar[],Vec*);
125: PETSC_EXTERN PetscErrorCode VecCreateMPIWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscScalar[],Vec*);
126: PETSC_EXTERN PetscErrorCode VecCreateShared(MPI_Comm,PetscInt,PetscInt,Vec*);
127: PETSC_EXTERN PetscErrorCode VecSetFromOptions(Vec);
128: PETSC_EXTERN PetscErrorCode VecViewFromOptions(Vec,const char[],const char[]);

130: PETSC_EXTERN PetscErrorCode VecSetUp(Vec);
131: PETSC_EXTERN PetscErrorCode VecDestroy(Vec*);
132: PETSC_EXTERN PetscErrorCode VecZeroEntries(Vec);
133: PETSC_EXTERN PetscErrorCode VecSetOptionsPrefix(Vec,const char[]);
134: PETSC_EXTERN PetscErrorCode VecAppendOptionsPrefix(Vec,const char[]);
135: PETSC_EXTERN PetscErrorCode VecGetOptionsPrefix(Vec,const char*[]);

137: PETSC_EXTERN PetscErrorCode VecSetSizes(Vec,PetscInt,PetscInt);

139: PETSC_EXTERN PetscErrorCode VecDotNorm2(Vec,Vec,PetscScalar*,PetscReal*);
140: PETSC_EXTERN PetscErrorCode VecDot(Vec,Vec,PetscScalar*);
141: PETSC_EXTERN PetscErrorCode VecDotRealPart(Vec,Vec,PetscReal*);
142: PETSC_EXTERN PetscErrorCode VecTDot(Vec,Vec,PetscScalar*);
143: PETSC_EXTERN PetscErrorCode VecMDot(Vec,PetscInt,const Vec[],PetscScalar[]);
144: PETSC_EXTERN PetscErrorCode VecMTDot(Vec,PetscInt,const Vec[],PetscScalar[]);
145: PETSC_EXTERN PetscErrorCode VecGetSubVector(Vec,IS,Vec*);
146: PETSC_EXTERN PetscErrorCode VecRestoreSubVector(Vec,IS,Vec*);

148: /*E
149:     NormType - determines what type of norm to compute

151:     Level: beginner

153: .seealso: VecNorm(), VecNormBegin(), VecNormEnd(), MatNorm()
154: E*/
155: typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;
156: PETSC_EXTERN const char *const NormTypes[];
157: #define NORM_MAX NORM_INFINITY

159: /*MC
160:      NORM_1 - the one norm, ||v|| = sum_i | v_i |. ||A|| = max_j || v_*j ||, maximum column sum

162:    Level: beginner

164: .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_2, NORM_FROBENIUS,
165:            NORM_INFINITY, NORM_1_AND_2

167: M*/

169: /*MC
170:      NORM_2 - the two norm, ||v|| = sqrt(sum_i (v_i)^2) (vectors only)

172:    Level: beginner

174: .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_FROBENIUS,
175:            NORM_INFINITY, NORM_1_AND_2

177: M*/

179: /*MC
180:      NORM_FROBENIUS - ||A|| = sqrt(sum_ij (A_ij)^2), same as NORM_2 for vectors

182:    Level: beginner

184: .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2,
185:            NORM_INFINITY, NORM_1_AND_2

187: M*/

189: /*MC
190:      NORM_INFINITY - ||v|| = max_i |v_i|. ||A|| = max_i || v_i* ||, maximum row sum

192:    Level: beginner

194: .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2,
195:            NORM_FROBINIUS, NORM_1_AND_2

197: M*/

199: /*MC
200:      NORM_1_AND_2 - computes both the 1 and 2 norm of a vector

202:    Level: beginner

204: .seealso:  NormType, MatNorm(), VecNorm(), VecNormBegin(), VecNormEnd(), NORM_1, NORM_2,
205:            NORM_FROBINIUS, NORM_INFINITY

207: M*/

209: /*MC
210:      NORM_MAX - see NORM_INFINITY

212:    Level: beginner

214: M*/

216: PETSC_EXTERN PetscErrorCode VecNorm(Vec,NormType,PetscReal *);
217: PETSC_EXTERN PetscErrorCode VecNormAvailable(Vec,NormType,PetscBool *,PetscReal *);
218: PETSC_EXTERN PetscErrorCode VecNormalize(Vec,PetscReal *);
219: PETSC_EXTERN PetscErrorCode VecSum(Vec,PetscScalar*);
220: PETSC_EXTERN PetscErrorCode VecMax(Vec,PetscInt*,PetscReal *);
221: PETSC_EXTERN PetscErrorCode VecMin(Vec,PetscInt*,PetscReal *);
222: PETSC_EXTERN PetscErrorCode VecScale(Vec,PetscScalar);
223: PETSC_EXTERN PetscErrorCode VecCopy(Vec,Vec);
224: PETSC_EXTERN PetscErrorCode VecSetRandom(Vec,PetscRandom);
225: PETSC_EXTERN PetscErrorCode VecSet(Vec,PetscScalar);
226: PETSC_EXTERN PetscErrorCode VecSwap(Vec,Vec);
227: PETSC_EXTERN PetscErrorCode VecAXPY(Vec,PetscScalar,Vec);
228: PETSC_EXTERN PetscErrorCode VecAXPBY(Vec,PetscScalar,PetscScalar,Vec);
229: PETSC_EXTERN PetscErrorCode VecMAXPY(Vec,PetscInt,const PetscScalar[],Vec[]);
230: PETSC_EXTERN PetscErrorCode VecAYPX(Vec,PetscScalar,Vec);
231: PETSC_EXTERN PetscErrorCode VecWAXPY(Vec,PetscScalar,Vec,Vec);
232: PETSC_EXTERN PetscErrorCode VecAXPBYPCZ(Vec,PetscScalar,PetscScalar,PetscScalar,Vec,Vec);
233: PETSC_EXTERN PetscErrorCode VecPointwiseMax(Vec,Vec,Vec);
234: PETSC_EXTERN PetscErrorCode VecPointwiseMaxAbs(Vec,Vec,Vec);
235: PETSC_EXTERN PetscErrorCode VecPointwiseMin(Vec,Vec,Vec);
236: PETSC_EXTERN PetscErrorCode VecPointwiseMult(Vec,Vec,Vec);
237: PETSC_EXTERN PetscErrorCode VecPointwiseDivide(Vec,Vec,Vec);
238: PETSC_EXTERN PetscErrorCode VecMaxPointwiseDivide(Vec,Vec,PetscReal*);
239: PETSC_EXTERN PetscErrorCode VecShift(Vec,PetscScalar);
240: PETSC_EXTERN PetscErrorCode VecReciprocal(Vec);
241: PETSC_EXTERN PetscErrorCode VecPermute(Vec, IS, PetscBool );
242: PETSC_EXTERN PetscErrorCode VecSqrtAbs(Vec);
243: PETSC_EXTERN PetscErrorCode VecLog(Vec);
244: PETSC_EXTERN PetscErrorCode VecExp(Vec);
245: PETSC_EXTERN PetscErrorCode VecAbs(Vec);
246: PETSC_EXTERN PetscErrorCode VecDuplicate(Vec,Vec*);
247: PETSC_EXTERN PetscErrorCode VecDuplicateVecs(Vec,PetscInt,Vec*[]);
248: PETSC_EXTERN PetscErrorCode VecDestroyVecs(PetscInt, Vec*[]);
249: PETSC_EXTERN PetscErrorCode VecStrideNormAll(Vec,NormType,PetscReal[]);
250: PETSC_EXTERN PetscErrorCode VecStrideMaxAll(Vec,PetscInt [],PetscReal []);
251: PETSC_EXTERN PetscErrorCode VecStrideMinAll(Vec,PetscInt [],PetscReal []);
252: PETSC_EXTERN PetscErrorCode VecStrideScaleAll(Vec,const PetscScalar[]);

254: PETSC_EXTERN PetscErrorCode VecStrideNorm(Vec,PetscInt,NormType,PetscReal*);
255: PETSC_EXTERN PetscErrorCode VecStrideMax(Vec,PetscInt,PetscInt *,PetscReal *);
256: PETSC_EXTERN PetscErrorCode VecStrideMin(Vec,PetscInt,PetscInt *,PetscReal *);
257: PETSC_EXTERN PetscErrorCode VecStrideScale(Vec,PetscInt,PetscScalar);
258: PETSC_EXTERN PetscErrorCode VecStrideSet(Vec,PetscInt,PetscScalar);


261: PETSC_EXTERN PetscErrorCode VecStrideGather(Vec,PetscInt,Vec,InsertMode);
262: PETSC_EXTERN PetscErrorCode VecStrideScatter(Vec,PetscInt,Vec,InsertMode);
263: PETSC_EXTERN PetscErrorCode VecStrideGatherAll(Vec,Vec[],InsertMode);
264: PETSC_EXTERN PetscErrorCode VecStrideScatterAll(Vec[],Vec,InsertMode);

266: PETSC_EXTERN PetscErrorCode VecSetValues(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
267: PETSC_EXTERN PetscErrorCode VecGetValues(Vec,PetscInt,const PetscInt[],PetscScalar[]);
268: PETSC_EXTERN PetscErrorCode VecAssemblyBegin(Vec);
269: PETSC_EXTERN PetscErrorCode VecAssemblyEnd(Vec);
270: PETSC_EXTERN PetscErrorCode VecStashSetInitialSize(Vec,PetscInt,PetscInt);
271: PETSC_EXTERN PetscErrorCode VecStashView(Vec,PetscViewer);
272: PETSC_EXTERN PetscErrorCode VecStashGetInfo(Vec,PetscInt*,PetscInt*,PetscInt*,PetscInt*);

274: /*MC
275:    VecSetValue - Set a single entry into a vector.

277:    Synopsis:
278:    #include "petscvec.h"
279:    PetscErrorCode VecSetValue(Vec v,PetscInt row,PetscScalar value, InsertMode mode);

281:    Not Collective

283:    Input Parameters:
284: +  v - the vector
285: .  row - the row location of the entry
286: .  value - the value to insert
287: -  mode - either INSERT_VALUES or ADD_VALUES

289:    Notes:
290:    For efficiency one should use VecSetValues() and set several or
291:    many values simultaneously if possible.

293:    These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd()
294:    MUST be called after all calls to VecSetValues() have been completed.

296:    VecSetValues() uses 0-based indices in Fortran as well as in C.

298:    Level: beginner

300: .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValueLocal()
301: M*/
302: PETSC_STATIC_INLINE PetscErrorCode VecSetValue(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValues(v,1,&i,&va,mode);}


305: PETSC_EXTERN PetscErrorCode VecSetBlockSize(Vec,PetscInt);
306: PETSC_EXTERN PetscErrorCode VecGetBlockSize(Vec,PetscInt*);
307: PETSC_EXTERN PetscErrorCode VecSetValuesBlocked(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);

309: /* Dynamic creation and loading functions */
310: PETSC_EXTERN PetscFunctionList VecList;
311: PETSC_EXTERN PetscBool         VecRegisterAllCalled;
312: PETSC_EXTERN PetscErrorCode VecSetType(Vec, VecType);
313: PETSC_EXTERN PetscErrorCode VecGetType(Vec, VecType *);
314: PETSC_EXTERN PetscErrorCode VecRegister(const char[],PetscErrorCode (*)(Vec));
315: PETSC_EXTERN PetscErrorCode VecRegisterAll(void);

317: PETSC_EXTERN PetscErrorCode VecScatterCreate(Vec,IS,Vec,IS,VecScatter *);
318: PETSC_EXTERN PetscErrorCode VecScatterCreateEmpty(MPI_Comm,VecScatter *);
319: PETSC_EXTERN PetscErrorCode VecScatterCreateLocal(VecScatter,PetscInt,const PetscInt[],const PetscInt[],const PetscInt[],PetscInt,const PetscInt[],const PetscInt[],const PetscInt[],PetscInt);
320: PETSC_EXTERN PetscErrorCode VecScatterBegin(VecScatter,Vec,Vec,InsertMode,ScatterMode);
321: PETSC_EXTERN PetscErrorCode VecScatterEnd(VecScatter,Vec,Vec,InsertMode,ScatterMode);
322: PETSC_EXTERN PetscErrorCode VecScatterDestroy(VecScatter*);
323: PETSC_EXTERN PetscErrorCode VecScatterCopy(VecScatter,VecScatter *);
324: PETSC_EXTERN PetscErrorCode VecScatterView(VecScatter,PetscViewer);
325: PETSC_EXTERN PetscErrorCode VecScatterRemap(VecScatter,PetscInt *,PetscInt*);
326: PETSC_EXTERN PetscErrorCode VecScatterGetMerged(VecScatter,PetscBool *);

328: PETSC_EXTERN PetscErrorCode VecGetArray4d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
329: PETSC_EXTERN PetscErrorCode VecRestoreArray4d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar****[]);
330: PETSC_EXTERN PetscErrorCode VecGetArray3d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
331: PETSC_EXTERN PetscErrorCode VecRestoreArray3d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar***[]);
332: PETSC_EXTERN PetscErrorCode VecGetArray2d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
333: PETSC_EXTERN PetscErrorCode VecRestoreArray2d(Vec,PetscInt,PetscInt,PetscInt,PetscInt,PetscScalar**[]);
334: PETSC_EXTERN PetscErrorCode VecGetArray1d(Vec,PetscInt,PetscInt,PetscScalar *[]);
335: PETSC_EXTERN PetscErrorCode VecRestoreArray1d(Vec,PetscInt,PetscInt,PetscScalar *[]);

337: PETSC_EXTERN PetscErrorCode VecPlaceArray(Vec,const PetscScalar[]);
338: PETSC_EXTERN PetscErrorCode VecResetArray(Vec);
339: PETSC_EXTERN PetscErrorCode VecReplaceArray(Vec,const PetscScalar[]);
340: PETSC_EXTERN PetscErrorCode VecGetArrays(const Vec[],PetscInt,PetscScalar**[]);
341: PETSC_EXTERN PetscErrorCode VecRestoreArrays(const Vec[],PetscInt,PetscScalar**[]);

343: PETSC_EXTERN PetscErrorCode VecView(Vec,PetscViewer);
344: PETSC_EXTERN PetscErrorCode VecEqual(Vec,Vec,PetscBool *);
345: PETSC_EXTERN PetscErrorCode VecLoad(Vec, PetscViewer);

347: PETSC_EXTERN PetscErrorCode VecGetSize(Vec,PetscInt*);
348: PETSC_EXTERN PetscErrorCode VecGetLocalSize(Vec,PetscInt*);
349: PETSC_EXTERN PetscErrorCode VecGetOwnershipRange(Vec,PetscInt*,PetscInt*);
350: PETSC_EXTERN PetscErrorCode VecGetOwnershipRanges(Vec,const PetscInt *[]);

352: PETSC_EXTERN PetscErrorCode VecSetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping);
353: PETSC_EXTERN PetscErrorCode VecSetValuesLocal(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);

355: /*MC
356:    VecSetValueLocal - Set a single entry into a vector using the local numbering

358:    Synopsis:
359:    #include "petscvec.h"
360:    PetscErrorCode VecSetValueLocal(Vec v,PetscInt row,PetscScalar value, InsertMode mode);

362:    Not Collective

364:    Input Parameters:
365: +  v - the vector
366: .  row - the row location of the entry
367: .  value - the value to insert
368: -  mode - either INSERT_VALUES or ADD_VALUES

370:    Notes:
371:    For efficiency one should use VecSetValues() and set several or
372:    many values simultaneously if possible.

374:    These values may be cached, so VecAssemblyBegin() and VecAssemblyEnd()
375:    MUST be called after all calls to VecSetValues() have been completed.

377:    VecSetValues() uses 0-based indices in Fortran as well as in C.

379:    Level: beginner

381: .seealso: VecSetValues(), VecAssemblyBegin(), VecAssemblyEnd(), VecSetValuesBlockedLocal(), VecSetValue()
382: M*/
383: PETSC_STATIC_INLINE PetscErrorCode VecSetValueLocal(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValuesLocal(v,1,&i,&va,mode);}

385: PETSC_EXTERN PetscErrorCode VecSetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping);
386: PETSC_EXTERN PetscErrorCode VecSetValuesBlockedLocal(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
387: PETSC_EXTERN PetscErrorCode VecGetLocalToGlobalMappingBlock(Vec,ISLocalToGlobalMapping*);
388: PETSC_EXTERN PetscErrorCode VecGetLocalToGlobalMapping(Vec,ISLocalToGlobalMapping*);

390: PETSC_EXTERN PetscErrorCode VecDotBegin(Vec,Vec,PetscScalar *);
391: PETSC_EXTERN PetscErrorCode VecDotEnd(Vec,Vec,PetscScalar *);
392: PETSC_EXTERN PetscErrorCode VecTDotBegin(Vec,Vec,PetscScalar *);
393: PETSC_EXTERN PetscErrorCode VecTDotEnd(Vec,Vec,PetscScalar *);
394: PETSC_EXTERN PetscErrorCode VecNormBegin(Vec,NormType,PetscReal *);
395: PETSC_EXTERN PetscErrorCode VecNormEnd(Vec,NormType,PetscReal *);

397: PETSC_EXTERN PetscErrorCode VecMDotBegin(Vec,PetscInt,const Vec[],PetscScalar[]);
398: PETSC_EXTERN PetscErrorCode VecMDotEnd(Vec,PetscInt,const Vec[],PetscScalar[]);
399: PETSC_EXTERN PetscErrorCode VecMTDotBegin(Vec,PetscInt,const Vec[],PetscScalar[]);
400: PETSC_EXTERN PetscErrorCode VecMTDotEnd(Vec,PetscInt,const Vec[],PetscScalar[]);
401: PETSC_EXTERN PetscErrorCode PetscCommSplitReductionBegin(MPI_Comm);


404: typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_IGNORE_NEGATIVE_INDICES} VecOption;
405: PETSC_EXTERN PetscErrorCode VecSetOption(Vec,VecOption,PetscBool );

407: PETSC_EXTERN PetscErrorCode VecGetArray(Vec,PetscScalar**);
408: PETSC_EXTERN PetscErrorCode VecGetArrayRead(Vec,const PetscScalar**);
409: PETSC_EXTERN PetscErrorCode VecRestoreArray(Vec,PetscScalar**);
410: PETSC_EXTERN PetscErrorCode VecRestoreArrayRead(Vec,const PetscScalar**);

412: PETSC_EXTERN PetscErrorCode VecValidValues(Vec,PetscInt,PetscBool);

414: PETSC_EXTERN PetscErrorCode VecContourScale(Vec,PetscReal,PetscReal);

416: /*
417:     These numbers need to match the entries in
418:   the function table in vecimpl.h
419: */
420: typedef enum { VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_DUPLICATE = 0} VecOperation;
421: PETSC_EXTERN PetscErrorCode VecSetOperation(Vec,VecOperation,void(*)(void));

423: /*
424:      Routines for dealing with ghosted vectors:
425:   vectors with ghost elements at the end of the array.
426: */
427: PETSC_EXTERN PetscErrorCode VecMPISetGhost(Vec,PetscInt,const PetscInt[]);
428: PETSC_EXTERN PetscErrorCode VecCreateGhost(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscInt[],Vec*);
429: PETSC_EXTERN PetscErrorCode VecCreateGhostWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,const PetscInt[],const PetscScalar[],Vec*);
430: PETSC_EXTERN PetscErrorCode VecCreateGhostBlock(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,const PetscInt[],Vec*);
431: PETSC_EXTERN PetscErrorCode VecCreateGhostBlockWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,const PetscInt[],const PetscScalar[],Vec*);
432: PETSC_EXTERN PetscErrorCode VecGhostGetLocalForm(Vec,Vec*);
433: PETSC_EXTERN PetscErrorCode VecGhostRestoreLocalForm(Vec,Vec*);
434: PETSC_EXTERN PetscErrorCode VecGhostIsLocalForm(Vec,Vec,PetscBool*);
435: PETSC_EXTERN PetscErrorCode VecGhostUpdateBegin(Vec,InsertMode,ScatterMode);
436: PETSC_EXTERN PetscErrorCode VecGhostUpdateEnd(Vec,InsertMode,ScatterMode);

438: PETSC_EXTERN PetscErrorCode VecConjugate(Vec);

440: PETSC_EXTERN PetscErrorCode VecScatterCreateToAll(Vec,VecScatter*,Vec*);
441: PETSC_EXTERN PetscErrorCode VecScatterCreateToZero(Vec,VecScatter*,Vec*);

443: PETSC_EXTERN PetscErrorCode PetscViewerMathematicaGetVector(PetscViewer, Vec);
444: PETSC_EXTERN PetscErrorCode PetscViewerMathematicaPutVector(PetscViewer, Vec);

446: /*S
447:      Vecs - Collection of vectors where the data for the vectors is stored in
448:             one contiguous memory

450:    Level: advanced

452:    Notes:
453:     Temporary construct for handling multiply right hand side solves

455:     This is faked by storing a single vector that has enough array space for
456:     n vectors

458:   Concepts: parallel decomposition

460: S*/
461:         struct _n_Vecs  {PetscInt n; Vec v;};
462: typedef struct _n_Vecs* Vecs;
463: PETSC_EXTERN PetscErrorCode VecsDestroy(Vecs);
464: PETSC_EXTERN PetscErrorCode VecsCreateSeq(MPI_Comm,PetscInt,PetscInt,Vecs*);
465: PETSC_EXTERN PetscErrorCode VecsCreateSeqWithArray(MPI_Comm,PetscInt,PetscInt,PetscScalar*,Vecs*);
466: PETSC_EXTERN PetscErrorCode VecsDuplicate(Vecs,Vecs*);

468: #if defined(PETSC_HAVE_CUSP)
469: typedef struct _p_PetscCUSPIndices* PetscCUSPIndices;
470: PETSC_EXTERN PetscErrorCode PetscCUSPIndicesCreate(PetscInt, PetscInt*,PetscInt, PetscInt*,PetscCUSPIndices*);
471: PETSC_EXTERN PetscErrorCode PetscCUSPIndicesDestroy(PetscCUSPIndices*);
472: PETSC_EXTERN PetscErrorCode VecCUSPCopyToGPUSome_Public(Vec,PetscCUSPIndices);
473: PETSC_EXTERN PetscErrorCode VecCUSPCopyFromGPUSome_Public(Vec,PetscCUSPIndices);

475: #if defined(PETSC_HAVE_TXPETSCGPU)
476: PETSC_EXTERN PetscErrorCode VecCUSPResetIndexBuffersFlagsGPU_Public(PetscCUSPIndices);
477: PETSC_EXTERN PetscErrorCode VecCUSPCopySomeToContiguousBufferGPU_Public(Vec,PetscCUSPIndices);
478: PETSC_EXTERN PetscErrorCode VecCUSPCopySomeFromContiguousBufferGPU_Public(Vec,PetscCUSPIndices);
479: PETSC_EXTERN PetscErrorCode VecScatterInitializeForGPU(VecScatter,Vec,ScatterMode);
480: PETSC_EXTERN PetscErrorCode VecScatterFinalizeForGPU(VecScatter);
481: #endif

483: PETSC_EXTERN PetscErrorCode VecCreateSeqCUSP(MPI_Comm,PetscInt,Vec*);
484: PETSC_EXTERN PetscErrorCode VecCreateMPICUSP(MPI_Comm,PetscInt,PetscInt,Vec*);
485: #endif

487: PETSC_EXTERN PetscErrorCode VecNestGetSubVecs(Vec,PetscInt*,Vec**);
488: PETSC_EXTERN PetscErrorCode VecNestGetSubVec(Vec,PetscInt,Vec*);
489: PETSC_EXTERN PetscErrorCode VecNestSetSubVecs(Vec,PetscInt,PetscInt*,Vec*);
490: PETSC_EXTERN PetscErrorCode VecNestSetSubVec(Vec,PetscInt,Vec);
491: PETSC_EXTERN PetscErrorCode VecCreateNest(MPI_Comm,PetscInt,IS*,Vec*,Vec*);
492: PETSC_EXTERN PetscErrorCode VecNestGetSize(Vec,PetscInt*);

494: PETSC_EXTERN PetscErrorCode PetscOptionsVec(const char[],const char[],const char[],Vec,PetscBool*);
495: PETSC_EXTERN PetscErrorCode VecChop(Vec,PetscReal);

497: PETSC_EXTERN PetscErrorCode VecGetLayout(Vec,PetscLayout*);
498: PETSC_EXTERN PetscErrorCode VecSetLayout(Vec,PetscLayout);

500: PETSC_EXTERN PetscErrorCode PetscSectionVecView(PetscSection, Vec, PetscViewer);
501: PETSC_EXTERN PetscErrorCode VecGetValuesSection(Vec, PetscSection, PetscInt, PetscScalar **);
502: PETSC_EXTERN PetscErrorCode VecSetValuesSection(Vec, PetscSection, PetscInt, PetscScalar [], InsertMode);

504: #endif